Oryctolagus cuniculus (rabbit): 100340535
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Entry
100340535 CDS
T03373
Name
(RefSeq) nuclear RNA export factor 2 isoform X2
KO
K14284
nuclear RNA export factor
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03008
Ribosome biogenesis in eukaryotes
ocu03013
Nucleocytoplasmic transport
ocu03015
mRNA surveillance pathway
ocu05014
Amyotrophic lateral sclerosis
ocu05164
Influenza A
ocu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100340535
03015 mRNA surveillance pathway
100340535
03008 Ribosome biogenesis in eukaryotes
100340535
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100340535
05168 Herpes simplex virus 1 infection
100340535
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100340535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100340535
03009 Ribosome biogenesis [BR:
ocu03009
]
100340535
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100340535
mRNA cycle factors
Stress granule specific factors
100340535
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100340535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
LRR_LRWD1
UBA_8
Motif
Other DBs
NCBI-GeneID:
100340535
NCBI-ProteinID:
XP_008271326
Ensembl:
ENSOCUG00000015043
LinkDB
All DBs
Position
X:87174529..87265675
Genome browser
AA seq
617 aa
AA seq
DB search
MSFTQRKSGANQREERSGSSSVHEGRKRSWGSFQGNFSGRNLLYEHSRHEHLRSHRHDDD
GTVAMRNVHQEPQLRRTPNNMQYSKRRLKYNHDHVDAYGSKKCPEGEMEDGTVSCWFKVT
VPNGRKYNKKWLLSSIQSESTVHFTPVDFHYINNQARFFVQYSDTASALKNVSHKICDDE
NRKIPIFVNRSSVPYSVKNKLKPEEMEQLKLTLNKRYDASRQALDLQNLRFDPDLVGHDI
DMILNRRQCMDATLKIIEGNFPELLSLNLCNNKLYQLDGLCDIIENAPKVKILNLSNNEL
KTACELNKLKELNLEELWLEGNPLWRTFPNHSAYVSAMQDCFPNLLRLDGREIASPVVID
VGAPKLVKLSKEIPKGTEMLKSLVLQFLQEYYFIYDYGDRRGLLGTYHDKACFSLTMPFN
SMDPVPSGLFVYLQNSRNIKNVTDPHLRRQLLKHTSRDIVDALSVLPRTKHDFSSFSIDM
WFHTETMLCFSVNGVFKEENGSPDSVFAFTRTFIAIPGSTSSLCITNDQLFVKNVSSSML
QCTSSIPGATPSSSCTPVLSQLQLQMVQSFSTQSGMKIEWSQKCLEENEWNYTRAAQAFI
NLQTQGTIPKEAFQQSV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttactcaaaggaagagtggtgcaaaccagcgtgaagaacgcagtggcagcagt
agtgttcatgaaggaagaaagagaagttggggttctttccagggtaatttttctgggagg
aaccttctttatgaacatagtaggcatgagcatttacgttcacaccgccatgatgatgat
ggaactgtagcaatgaggaatgtacaccaggaaccccagttaagacgcactccaaataat
atgcaatacagcaagaggagactgaaatataatcatgaccatgtggatgcgtatggatct
aagaaatgtccagagggagaaatggaggatggaactgtatcatgctggttcaaggtcaca
gttcccaatgggagaaagtataacaagaaatggctgttgagctcaatccagagcgagtcc
actgttcacttcactccggttgattttcattacatcaacaatcaggctcggttctttgtg
cagtattctgacactgcatctgcactgaagaatgtcagccacaagatttgtgatgacgag
aaccgaaagatacctatcttcgtcaaccgctcttctgtaccctactctgtgaagaataag
ttgaagccagaggaaatggagcagctaaagttgaccttgaacaagcgatatgatgcttcc
cggcaagctcttgacctccagaacctccgctttgatccagacttggttggccatgatatt
gatatgattctgaatcgaagacagtgcatggatgccacactgaagatcattgaaggaaat
ttccctgagctgttgtctttgaacttgtgcaacaacaaactgtaccagctggacggcctg
tgtgatattatagagaatgctcctaaagtcaagatcctgaacctctccaacaatgagctg
aagacagcatgtgaattaaacaagctaaaagagctgaatcttgaagagttgtggctagaa
ggcaacccattgtggagaaccttccctaaccactctgcctatgtaagtgccatgcaggac
tgcttccctaatttgttacgcttggatggccgagagattgcctcacctgttgtcattgat
gttggtgctcctaagttagtaaaactctccaaggaaatcccaaaaggaactgaaatgctg
aagagtctcgtcctgcaattcctgcaggagtattacttcatctatgactatggggatcgt
cgtggtctccttggtacttaccatgacaaggcctgcttctccctgaccatgcccttcaac
tccatggacccagtcccgagcggcctgtttgtgtacttacagaacagcaggaatatcaaa
aatgtcacggatccccacttgcgaaggcagctattgaagcacacaagccgtgacatagtg
gatgctctcagtgtgttgccaagaactaaacatgactttagttctttctcaatagacatg
tggttccatacggaaactatgctttgcttttctgtcaacggggtatttaaggaagaaaac
ggttctccggattctgtgtttgccttcacccggaccttcatcgctatccctggcagcact
tccagtctctgcatcacgaatgaccaactgtttgtgaagaacgtcagcagcagcatgttg
cagtgcacctcctccatcccaggagccacaccaagctccagttgcacacccgtactctcc
cagctgcagctgcaaatggtgcagtctttctccacccagtctgggatgaaaattgagtgg
tctcaaaagtgccttgaggagaatgagtggaactacaccagagcagcacaggccttcatt
aacctccagacacagggcacgatcccaaaggaggccttccaacagagtgtctaa
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