Oryctolagus cuniculus (rabbit): 100340580
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Entry
100340580 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: GDNF-inducible zinc finger protein 1-like
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100340580
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
100340580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
zf-C2H2_8
zf-C2H2_3rep
zf-C2H2_16
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
100340580
NCBI-ProteinID:
XP_051709570
LinkDB
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Position
11:complement(78012493..78015076)
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AA seq
718 aa
AA seq
DB search
MESGAVLLESKSSPLNLLHEMHELRRLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
KEMFLNEKSADGARTNVHLNEVQVVDFASFLEFVYTAKVQVEEDRVQRMLETAEKLKCLD
LSETCFQLKKQMLESVLLELQNFSESQGAEASGGPQVGVGPDPRAGALGMDGAHPNGLVD
RSDYPGEQMSNGVSPGTPPRKSKEKADKKKDVAKPPYPKIRRASGRLAGRKVFVEIPKKK
YTRRLREQETGAEGSSGDPGAAQAQDPESAGMETRPLTKVEGGGAGMQVADPLPKAAGEG
EEEEEEEKEEEEEGGAAEKRRSNLKCGICEKAFLYEKSFLKHIRRHHGVASEVVYRCDTC
GQTFANRCNLRSHQRHVHSSERRFPCELCGKKFKRXKDVKRHAVQVHEGGGERHRCGQCG
KGLSSKTALRLHERTHTGDRPXGCTECGAKFSQPSALKTHMRIHTGEKPFVCDECGARFT
QNHMLIYHKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNS
LYQHIKVHTGERPYCCDQCRKQFTQLNALQRHXRIHRGEKPLMCNACGRTFTDKSTLRRH
TSIHDKNTPWKSFLVIVDGSPKNDEGHKTEQPDEEYVPPKLSDKLLSFAESSHFHGLAAV
PGSVAPAHDGNAADTACKADAAVVSQDALLATTLSELSELSPQADAMPAQLHPLTSME
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggcgcggtgctgctggaatccaagtcctcgccgctgaacctgctgcacgag
atgcacgagctgcgccgcctgggccacctgtgcgacgtcacggtcagcgtggagtaccag
ggcgtccgcaaagacttcatggcccacaaggctgtgctggcggccaccagcaagttcttc
aaagaaatgttccttaacgagaagagcgccgacggggccaggactaacgtgcacttgaat
gaggtgcaggtcgtggactttgcttcgttcctcgagtttgtctacaccgccaaggtgcag
gtggaagaagaccgggtgcagcggatgctggagacggccgagaaactgaaatgtctggac
ttgtcggaaacgtgttttcagctcaagaagcagatgctggagtcggtgcttttggagctg
cagaatttctcagagtcccagggggcagaggccagtggcggcccccaagtcggagttggc
cccgacccccgggcaggtgcactgggtatggacggggctcaccccaacggcctggtggat
cgttcagactacccaggggagcagatgagcaatggtgtgtcgccaggcacaccgccgagg
aagtccaaggagaaagcggacaagaagaaggatgtggctaagcctccctaccccaaaatc
agaagagccagcgggagactggccggaagaaaggtcttcgtggagatccctaaaaaaaaa
tacacgaggaggctgcgagagcaagagacaggtgccgagggcagctcgggagaccccggg
gccgcccaggcccaagacccagagagcgcggggatggagaccaggccccttacaaaagtt
gaggggggtggggctggcatgcaggtggcagacccccttccaaaggcagccggggagggg
gaggaggaggaggaggaggaaaaggaggaagaggaggaggggggtgcggcggagaagagg
aggagcaacctgaagtgcggcatctgtgagaaggccttcttgtacgagaagagcttcctg
aagcacatccggcggcaccacggcgtggccagcgaggtggtgtaccgctgtgacacctgc
ggccagaccttcgccaaccgctgcaacctgcgcagccaccagcgccacgtgcacagcagc
gagcggcgcttcccctgcgagctgtgcggcaagaagttcaagcgctagaaggacgtgaag
cggcacgcagtacaggtgcacgagggcggcggcgagcggcaccgctgcggccagtgcggc
aagggcctgagctccaagacggcgctgcggctgcatgagcgcacgcacaccggcgacagg
ccctaaggctgcaccgagtgcggggcgaagttctcgcagccgtcagcgctcaagacccac
atgagaatccacaccggggaaaaacctttcgtctgtgatgagtgtggcgcaagattcacc
cagaaccacatgctgatttatcacaaaaggtgccacacaggtgagaggcctttcatgtgt
gagacatgcggcaagagttttgcttcgaaggagtacttgaaacatcacaacagaatccac
actggctcgaaaccctttaaatgtgaagtgtgcttccggacttttgctcagcggaactcc
ctgtaccagcacatcaaggtccacacaggggagcgcccctactgttgtgaccagtgtagg
aagcagttcacccagctcaacgccttacagcgccacnatcggatccacaggggcgagaag
ccgttaatgtgcaacgcttgcgggcgcacgttcacggacaagtccactctgcggcggcac
acctctatacacgataagaatactccatggaagtctttccttgtcattgtagatggctcc
cccaagaacgacgagggtcacaagacagaacagccggatgaagagtacgtgccgcccaag
ctttcagataaactgctgtcttttgcagaaagcagccactttcacggcctggccgcggtg
cccggcagtgtcgcccccgcccacgacggcaatgccgcagacaccgcctgcaaggccgac
gccgccgtggtgtcccaggacgccctgctggccaccaccctcagtgagctcagcgagctg
agcccgcaggcggacgcgatgcccgcccagctgcaccccttgaccagcatggagtga
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