Oryctolagus cuniculus (rabbit): 100340600
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Entry
100340600 CDS
T03373
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04082
Neuroactive ligand signaling
ocu04721
Synaptic vesicle cycle
ocu04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100340600
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
100340600
04721 Synaptic vesicle cycle
100340600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100340600
Transporters [BR:
ocu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100340600
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
100340600
NCBI-ProteinID:
XP_008269176
Ensembl:
ENSOCUG00000003640
UniProt:
A0A5F9CLU6
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Position
19:15613777..15656783
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AA seq
628 aa
AA seq
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METTPLNAQPGRSACKDGEDCRGSGVLRKGVAGDKAEPGQLSNGYSGVPGPGAGDDAGHA
ILAATTTLEAEAHPGGRETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYT
IMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGFAICIIAFYIASYYNTIMAW
ALYYLISSFTDQLPWTSCENSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRS
KGLQALGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGATL
PGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDAL
VTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVARDAGPSLLFITYAEAIANMPASTF
FAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHTWAKCREWFVLLVVITCFFGSLITLT
FGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRICWV
AISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGASSVICIPTYIIYRLIITPG
TFKERIIRSITPETPTEIPCGDIRLDAV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccctgaacgctcagcccgggcgctcggcctgcaaggacggagaggac
tgccggggcagcggggtgctgcggaagggcgtggcgggcgacaaggcggagcccggccag
ctgtccaatgggtactcgggggtgcccggccctggtgctggagacgacgctggccacgct
atcttggcagccacgaccacgctggaggcggaggctcatccaggagggcgggagacctgg
ggcaagaaggtggacttcctcctctcggtcatcggttacgccgtggacctgggcaacgtg
tggcgcttcccctacatatgttaccagaacggaggcggagcgttcctcctcccctacacc
atcatggccgtttttggggggatcccactcttctacatggagcttgcgctgggccagtac
caccgaaatggatgcatttccatatggcggaaaatctgcccgattttcaaagggatcggc
tttgccatctgcatcattgccttctacatcgcctcctactacaacaccatcatggcctgg
gccctctactacctcatctcctccttcacggaccagctgccctggaccagctgcgagaac
tcctggaacactggcaactgcaccaactacttctcagaggacaacatcacctggacgctc
cactccacatcccctgctgaggagttttacacgcgccacgtcttgcagatccaccggtct
aaggggctccaggccctggggggcatcagctggcagctagccctctgcatcatgctgatc
ttcactattatctacttcagcatctggaaaggtgtcaaaacatctggcaaggtggtgtgg
gtgacagccactttcccctacatcatcctgtccatcctgctggtgaggggggccaccctc
cccggagcctggagaggtgttctcttctacctgaaacccaactggcaaaaactcctcgag
acaggggtgtgggtggatgctgccgctcagatcttcttctctctcgggccgggctttggg
gtcctgttggccttcgccagctacaacaagttcaacaacaactgttaccaagacgccctg
gtgaccagcgtggtgaactgcatgaccagctttgtttccggattcgtcatcttcacggtg
ctcgggtacatggcggagatgaggaacgaagatgtgtctgaggtggccagagacgcgggc
cccagcctcctcttcatcacgtatgcggaagccatagccaacatgccagcatccactttc
tttgccatcatcttcttcctgatgctaatcacactgggcttggacagcacgttcgcaggc
ttggagggggtgatcacggccgtgctggatgagtttccgcatacctgggccaagtgtcgc
gagtggttcgtgctcctcgtggtcattacctgcttctttggctctctgatcaccctgact
tttgggggcgcctacgtggtgaagctgctggaggagtacgccacaggcccagccgtgctg
accgtcgcgctcatagaagcggtcgctgtgtcttggttctacggcatcactcagttctgc
agtgatgtgaaggagatgcttggcttcagccctggatggttctggaggatctgctgggtg
gccatcagccccctctttctcctgtttatcatttgcagttttttgatgagtccaccacag
ctacgacttttccaatataattatccccactggagtatcatcctgggctactgcattgga
gcttcgtctgtcatctgcatccccacgtatatcatttaccggctgattatcactcctggg
acgtttaaagagcgtattattcgaagtatcactccagaaaccccaacagagattccctgt
ggggacatccgcctggacgctgtgtaa
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