Oryctolagus cuniculus (rabbit): 100340603
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Entry
100340603 CDS
T03373
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04390
Hippo signaling pathway
ocu04530
Tight junction
ocu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100340603 (PALS1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100340603 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
100340603 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
PDZ domain-containing proteins
MAGUK family proteins
100340603 (PALS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100340603
NCBI-ProteinID:
XP_002719566
Ensembl:
ENSOCUG00000012009
UniProt:
A0A5F9DMW1
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Position
20:complement(4664558..4742393)
Genome browser
AA seq
675 aa
AA seq
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MTTSHMNGHVTEESDSEVKNVGLASPEEHSKHREMAVDCPGDLGTRMMPVRRSAQLERIR
QQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPIFDTEEGIILESPHYAVK
ILEVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVTVHMNKASPPF
PLISNAQDLAQEVQTVLKPVHQKEGQELTALLNAPHFQALLLAHDKVAEQEMQLEPISEE
RVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMESVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDILSDMHGTLTFVLIPSQHIKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMK
HTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDHEVAGRDYHFVSRQAFEADI
AAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcccatatgaatgggcatgtcacagaagaatcagacagtgaagtaaaaaat
gttggtcttgcatcaccagaggaacattcaaagcaccgagagatggctgtggactgtcct
ggagatttgggcaccaggatgatgccagttcggcgaagtgcacagttggagcgtattcgg
caacagcaggaagacatgagacgtaggcgagaagaagaagggaaaaaacaagaacttgac
cttaattcctccatgagacttaagaaactggctcaaattcctccaaaaactggaatagat
aaccctatatttgatacagaggaaggaattatcttagaaagtcctcattatgctgtgaaa
atattagaagtggaagacttgttttcttcacttaagcatatccaacacactttggtagat
tctcagagccaggaggatatttcactacttttacaactcgtacaaaatagagatttccag
aatgcatttaagatacacaacgctgttacagtacacatgaacaaagccagtcctccattt
cctcttatctccaatgcacaagatcttgcacaagaggtacaaactgttttgaaaccggtt
catcagaaggaaggacaagaattaactgctttgttgaatgctccacattttcaggctctt
ttattggcccatgataaggttgctgagcaggaaatgcagctggagcccatttcagaggag
agagtttatgaaagcattggccagtatggaggagaaactgtaaaaatagttcgtatagaa
aaggctcgtgatattccattgggtgctacagttcgcaatgaaatggaatctgtgatcatt
agccggatagtaaaaggtggtgctgctgagaaaagtggtctgttacacgaaggagatgaa
gtcctggagattaatggcattgaaattcgagggaaagatgtcaatgaggtttttgacata
ttgtctgatatgcatggtactttgacatttgttctgattcccagtcaacacatcaaacct
cctcctgccaaagaaactgtaatccatgttaaggctcattttgactatgacccctcagat
gacccttatgttccatgtcgagagttaggtctgtcttttcaaaaaggggatattcttcat
gtgatcagtcaagaagatccaaactggtggcaggcctacagggagggggatgaagataac
caacctttagctgggcttgttccaggaaaaagctttcaacaacaaagggaagccatgaag
cataccatagaagaagataaggagccagaaaaatcaggaaaactatggtgtgcaaagaaa
aataaaaagaaaaggaaaaaggttttatataatgccaataaaaatgatgattatgacaat
gaggagatcttaacttatgaggaaatgtcactttaccatcagccagcaaataggaaaaga
cctatcattctaatcggtccacagaactgtggccagaatgaattgcgtcagaggctcatg
aacaaagaaaaggaccgctttgcatctgcagttcctcatacaactcggagtaggcgagac
catgaagtagctggtagagattaccactttgtttcacggcaagcatttgaggcagacata
gccgctggaaagttcattgagcatggtgaatttgagaaaaatttgtatggaaccagcata
gattctgtacggcaagtgatcaactctggcaaaatatgtcttttaagtctacgtacacag
tctttgaagaccctccggaattcagatttaaaaccatatattatcttcattgcaccccct
tcacaagaaagacttcgagcattattggccaaagagggcaagaatccaaagcctgaggag
ttgagagaaatcattgagaagactagagagatggagcagaacaatggccactactttgac
acagcaattgtgaattcagatcttgataaagcctatcaggaattgcttaggttaattaac
aaactggacactgaacctcagtgggtgccatccacttggctgaggtga
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