Oryctolagus cuniculus (rabbit): 100340660
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Entry
100340660 CDS
T03373
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocu03016
]
100340660
Enzymes [BR:
ocu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
100340660
Transfer RNA biogenesis [BR:
ocu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
100340660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
100340660
NCBI-ProteinID:
XP_051707680
Ensembl:
ENSOCUG00000013203
LinkDB
All DBs
Position
9:104612064..104650006
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AA seq
458 aa
AA seq
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MAEAVFHAPKRRRRVHESYESPWPIPLAQDCGPQSEFRMFRAEMINNSVVVRSPEDIGQL
YGKGYFGKGILSKSRPHFTGSDAKLVAKWKDIKTNMPVITSEKYQRRAEWAAELMRRQGQ
EESAVRRILEDFTRPLERPRVGRAKGGQLHGEPRSETASTSEGTARSKTLSVTNGDSEKA
GSASQPSDCLQEGPGPEPLSTNSLDEYVPEDPTPKPQVGRCEQDGLAPGCGSQPKDSSRG
AELPCADQECVLVEEVVCDGSPREDAPAGELVQRRQLVCRRNPYRIFEYLQLSLEEAFFL
VYALGCLSIYYEKEPLTIMKLWEAFSAVQPTFRTTYLAYHYFRSKGWVPKVGLKYGTDLL
LYRKGPPFYHASYSVIVELVDDRFQGTARRPFSWRALAALSRVSANVSKELMLCYLIKPS
TMTDEEMDSPECMKRIQVQEVILSRWVSSRERSDQDEF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagttttccacgccccgaaacggaggagaagagtgcacgagagttacgag
tccccctggcccatccctttggctcaggactgtggtccccagagcgagttcagaatgttc
cgcgccgagatgatcaacaacagcgtggtggtgaggagcccggaggacatcgggcagctg
tacgggaagggctactttggaaaaggtattctgtcaaaaagccgtccgcacttcacaggc
tcagatgctaagctggtggcgaagtggaaagatataaagactaacatgcctgtcatcaca
tcagaaaagtatcagcgccgtgcagagtgggccgcggagctcatgcgcaggcagggccag
gaggagagcgcagtgcgccgcatcctcgaagatttcacgcggccactggagcgacctcgg
gtcggaagggctaaaggcggccagttgcatggtgagcctcgctcagagacggcgtccacc
agcgagggcacagcaaggagcaagacactgtctgtgaccaacggggactccgaaaaggcg
ggcagtgcaagccagccctcggactgcctgcaggagggccctgggcccgagccactgagc
acaaacagcttggatgagtatgtgccggaagaccccacgcctaagccccaagtcggtcgc
tgtgaacaggacggcctcgcccctggatgtggctcccagcccaaggacagcagccgtggg
gcagagctcccctgtgctgaccaggagtgcgtgctggtggaggaggtggtgtgcgatggg
agcccgagggaggacgccccagctggggaattggtgcagagaaggcaattagtgtgcaga
agaaatccatacaggatctttgagtatttgcagctcagcctcgaagaggccttcttcctg
gtgtacgctctgggctgcctcagtatttactatgagaaggaacctttaacgataatgaaa
ctctgggaagccttcagtgcagtgcagcccacgttcaggaccacctacctggcctaccac
tatttccgaagcaagggctgggtgcccaaagtggggctcaagtacgggacggacctgttg
ctctaccggaaggggcctccgttctaccatgcaagctactccgtcatcgttgagctcgtg
gacgaccgtttccagggcacggcccgcaggccattcagctggagggcgctggccgccctg
agcagggtctcagcgaacgtctccaaggagcttatgctgtgttacttgattaaaccctct
accatgactgacgaggaaatggactccccagaatgtatgaaaagaatccaagtccaggag
gtgattctgagccgctgggtttcttcacgagagaggagcgaccaagacgagttctaa
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