Oryctolagus cuniculus (rabbit): 100340826
Help
Entry
100340826 CDS
T03373
Name
(RefSeq) cohesin subunit SA-3 isoform X4
KO
K13055
cohesin complex subunit SA-3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100340826
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Meiosis-specific proteins
Cohesin complex and associated proteins
100340826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
PDS5
Motif
Other DBs
NCBI-GeneID:
100340826
NCBI-ProteinID:
XP_008256257
Ensembl:
ENSOCUG00000013531
LinkDB
All DBs
Position
6:complement(27447492..27476454)
Genome browser
AA seq
1243 aa
AA seq
DB search
MTLRPSEGRRREPLCLRRRAMPTLRSSSSPLSTATGGTHAWSFSPGSSTPQPCDDRDSDQ
TSQGNSDSLSADEGSDFEDSLRRTVKKRTAKRPLRTTPAAKHPKKGSQMVHGHGQKESKP
PASDLFDAVKAARGDMQSLVDEWLESYKQDQDTGFLELINFFIRSCGCKGIVTPEMFKQM
TNSEIIRHLTEQFNEDSGDYPLITPGPLWKRFQGSFCEFVRALVYQCQYSLLYDGFPMDN
LISLLTGLSDSQVRAFRHTSTLAAMKLMTSLVRVALQLSLHKDNNQRQYDAERNKGPGQR
SPERLESLLEKRKELQEHQEDIEGMMNALFRGVFVHRYRDILPEIRAICIEEIGCWMQSY
SASFLTDSYLKYIGWTLHDKHREVRLKCLKALKGLYSNRELTGRLELFTSRFKDRMVSMV
MDKEYDVAVEAVRLLILILKNMEGMLTDVDCESIYPVVYASNRALASAAGEFLYWKLFYP
ECEVRAVSVRERHRSPHARRTFFHLLLSFFVESELHDHAAYLVDSLWDCAGARLKDWESM
TGLLLEKEQSLGDVQESTLIEILVSSARQAAEGHPPVGRVTGRKGLTAKERKLQADDKVK
LTEHLIPLLPPLLAKFSADAEKVAPLLQLLDYFDLNIYCTRRLERHLELLLEQLQEVVVK
HAEPAVLEAAAHALCLLCNPEFTFFSRVDFARSQLMDLLTDRFQQELSELLQSSVLDEDE
VYSLAATLKRLSAFYNAHDLTRWELYEPCYRLLRKAVDTGEVPHQVILPALTLVYFSILW
TLTHLSESGTSQEQLLSLKGRMVAFCELCQSCLSDVDPEIQEQAFVLLSDLLLIFSPQMI
VGGREFLRPLIFFPEATLQSELASFLMDHVFSQPGDLGSGHSQEDHLQIEQLHQRRRLLA
GFCKLLLYGVLEMDAASDIFKHYNKFYNDYGDIIKETLTRARQIDRSHCSQILLLSLKQL
YTELLQEHGPQGLNELPAFIEMRDLARRFALSFGPQQLQNRDLVVMLHKEGIKFALSELP
PAGSSSQPPNLPFLELLSEFSPRLFHQDKRLLLSYLEKCLQLVSQAPPHPWGSVTTYCHS
LSPAENVPEASPQGLPRSKRRRIEGPSRHSREGVLSQEESLQLNSIPPTPTLTSTVVKSR
QPLARLEEMESEFTQGQLLPGGQQSRSLSSQYLHVPHKPPGPGLGSRLTQLSLVEDSQEE
ELGILEESSEERQDRDKQPNGHSSPSEHGLDLLDTTELNIEDF
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgactcttcggccatcggaagggaggcggcgtgagccgctgtgcctgaggcggcgcgcc
atgcccactctgcggtcgtcctcctccccgctgagcacggccacgggcggcacccacgcc
tggtcgttttctcccggctcctccaccccccagccctgcgatgacagagactcggaccag
acctcgcaggggaacagtgactccttgtcagctgatgaaggcagtgactttgaagacagt
ctgagacgcactgtgaagaagagaacagcaaagcggccactcagaacaactccagcagca
aaacatccaaagaaggggtcccagatggtacatggtcatggtcagaaagagtcaaagcca
ccagccagtgatctctttgatgccgtgaaagctgccagaggtgatatgcagtctttggtg
gatgagtggctggaaagctacaagcaagaccaggatacaggattcctggagctcattaac
tttttcatcagatcttgtggatgtaaaggcatcgtgacccctgagatgttcaagcagatg
accaattcagagatcatccggcatctaacagagcagttcaatgaggattcaggggactat
cccctgataactccaggtccattgtggaagaggttccagggcagcttctgtgagtttgtg
agggctttggtgtatcagtgccagtacagcctcctctatgatggctttcctatggacaac
ctcatctccctgctcactggcctctcagactcccaagtccgtgccttccgtcatactagc
accctggctgctatgaagctgatgacttccctggtaagagttgccctccagttgagtctg
cacaaagacaacaaccagcgtcagtatgatgctgaacgaaacaagggtccagggcagaga
tcgcctgagcgactagaaagcctgttggagaagcgcaaagaactccaagagcatcaagag
gacattgaggggatgatgaacgcactcttcaggggggtctttgtgcatcggtacagggac
atccttcctgagatccgcgcgatctgcatcgaggaaattgggtgttggatgcagagctac
agtgcttcttttctcactgacagctacttaaaatacattggctggaccctgcatgataag
caccgggaagtgcgtctgaagtgcctgaaggccctgaaagggctgtacagcaaccgggag
ctgactgggcgcctggagctcttcaccagccgcttcaaggaccggatggtttccatggtc
atggacaaggagtatgatgtggcagtggaggccgtcagattgctgattcttatccttaag
aacatggaagggatgctgacagacgtggactgtgagagcatctaccctgttgtgtacgcc
tccaaccgagccctggcctctgccgctggagagtttctgtactggaagctgttctacccc
gagtgtgaggtgagagcagtgagtgtcagagagcgacaccgaagtccacatgcccggagg
actttcttccaccttctgctgtccttctttgtggagagtgagctccatgaccatgctgcc
tacctagtggacagcctgtgggactgcgcgggggctaggctgaaggactgggagagcatg
acaggcctgctgctggagaaggagcagagcctgggcgacgtgcaggagagcacactgata
gagatccttgtgtccagtgcccggcaggctgctgagggtcacccgcctgtggggcgggtc
actgggaggaagggcctgactgctaaagagcgtaagctccaggccgatgacaaggtgaag
ctgaccgaacacctcatccccctgctgcctccactcctggccaagttctcagctgatgcc
gagaaggtcgctcccctgctgcagcttctcgactattttgacctcaacatctactgcacc
cggcgcttggagaggcacttggagctgctgttggagcagctgcaggaggtggtggtgaag
cacgcagagcccgccgtgctcgaggctgcggctcacgccctctgcctgctctgcaatccc
gagttcaccttcttcagccgggtggactttgcccgtagccagctcatggatctgctgacg
gaccgcttccagcaggagctcagcgaactgctgcagtcgtccgtccttgatgaggatgag
gtgtacagcctggcagccacgctgaagcgcctctctgccttctataacgctcatgatcta
actcgctgggagctctatgagccatgctaccgactcctccggaaggccgtggacacagga
gaggttccacaccaggtgatcttgccagccttgactcttgtctacttttccattctctgg
acactgacccacctttctgaatcaggtacttcccaggagcagctgctgagtctgaagggc
agaatggtggccttctgcgagctctgccagagttgcctctccgatgtggatcctgagatc
caggagcaggcttttgtcttactaagtgatctgctcctcatctttagccctcagatgatt
gtaggggggcgtgagttccttaggccccttatcttttttcctgaagccactctccagtcc
gaactagccagcttcctcatggatcatgtcttcagccagccaggagacctgggcagtggt
cactcccaggaggatcatttacagatagagcagctgcaccaacggcgccgcctcctggct
ggattctgcaaactgttgctttatggggtgctggagatggatgcagcctcagatattttc
aaacactacaacaagttctacaatgactatggtgatattatcaaggaaacattaaccaga
gcaaggcagattgaccgaagccattgttcccaaatcctgttgctgagcctcaagcagctg
tacacagaactgctgcaagaacacgggccccagggcctgaatgagttaccagccttcatc
gagatgagggacctggcccggaggtttgccttgagcttcggaccccagcagctgcagaac
cgtgaccttgttgtcatgctacacaaggaaggcatcaagttcgccttgtcagagcttcct
ccagctggctcctccagtcagccccccaatctgccattcctggagctgctttcagagttc
tccccccgtctcttccatcaggacaagcggttgctactgtcctacctggaaaagtgtctg
cagctcgtgtcccaggcacctccccatccctggggttcagtcaccacctactgccactcc
ctcagtcctgcagagaacgtgcctgaggccagccctcagggcctcccccgctccaagagg
cggcgcattgaaggcccctccagacacagcagggagggtgtcctctcccaggaagaaagc
ctgcagctgaacagcatcccacccacacccaccctcacctccacagtggtgaagagcagg
cagcccctggctcggttggaagaaatggaatcggagttcactcagggccagctcctgcca
ggcggccagcagtccaggtccttgagttcgcagtatttgcacgttccacacaagcctccc
ggtcctggtttgggcagccggctgacccaactgagcctcgtggaggacagccaggaagaa
gagttaggcattctggaggagtcgagtgaagagcggcaggacagagacaagcaaccaaat
ggccactcttcccccagtgaacacgggctggacctcctagataccacagagctgaatatc
gaggatttctga
DBGET
integrated database retrieval system