Oryctolagus cuniculus (rabbit): 100340914
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Entry
100340914 CDS
T03373
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100340914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100340914
04121 Ubiquitin system [BR:
ocu04121
]
100340914
03036 Chromosome and associated proteins [BR:
ocu03036
]
100340914
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100340914
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100340914
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
100340914
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100340914
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100340914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100340914
NCBI-ProteinID:
XP_008257340
Ensembl:
ENSOCUG00000001552
UniProt:
G1SFN0
LinkDB
All DBs
Position
7:17476166..17558555
Genome browser
AA seq
771 aa
AA seq
DB search
MQGHRQPRVRSGNLPWPAPAMDPAGGGAWAHSRAALGRLENLLRCSRCGNILREPVCLGG
CEHIFCSNCVSDCIGTRCPVCHTPAWIQDVKINRQLGSMIQLCSKLRNLLHDNKLPDLKE
DTSRTRLFNDAESKKNSIKMWFSPRSKKVRYIVSKVSVQTQPQKMKDENTQQTSMYEFVS
ATPPTDVPKKAKKNSTTSGKKQKKKTLAEINQEWNLEAGKENSETDLKDECKEKLVSFCS
QPSVIASPPVNDEIDLLASGSVIECEPLGNLTEATLPLAEQIESPDIETKSEVTLEEVCE
NYPTSKRSLPLDGKGKRRLPSPVSKKRRSSTPSTSRDFPKQTEISENVPLPNCSSPPSNK
RKVGTTLSRKSSNVPEESLNLSPGTPPSSLNSSTYRRMMSSPLVLKSSPGSLMAGKRNHR
GETLLHVAAIKGDVPSVEYLLQNGSDPNVKDNAGWTPLHEACNHGHLRVVELLLQHKALV
NSTGYQNDSPLHDAAKNGHLDIVKLLLSYGASRNAVNIFGLRPVDYTDNENMKSLLLLPE
KNESSSTRHGLVLNTGHRRDRPLILIGSGLSSEQQKMLDELAAILKAKKCTEFDSTVTHV
IVPGGTLQSTLKCMLGILNGCWILKFEWVKACLQSKTCEREEKYEVPDGPQRSRLNREQL
LPKLFDGCYFYFGGTFKHLPKDNLIKLVTAAGGQVLSRRPKPDSDVTQTINTVAYHAQPD
SDQRFCTQYIIYEDFSPHYHPERIRQGKVWMAPSSWFIGCVMAFELLPLDS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggcatcggcagccgagggtccgctcggggaacctgccttggcccgcgccagcc
atggatccggcgggcggtggagcctgggcccacagccgcgccgcgctcggccgcctggag
aacttgctgcgctgctcgcgctgtggtaatattctgagggagcctgtttgcttaggagga
tgtgaacacatcttctgtagtaactgtgtaagtgactgcattggaaccagatgtccagtg
tgccataccccagcctggattcaagacgtcaaaataaatagacagttgggcagcatgatc
caactttgtagtaaacttcgaaatttgctccatgacaataagcttccagatttgaaagaa
gatacatctagaacacgtttatttaatgatgcagaaagcaagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggttagatacattgtgagtaaagtctcagtgcaaacc
cagcctcaaaagatgaaagatgaaaatactcagcaaacctcaatgtatgaatttgtctct
gcaactcctcctacagatgttcctaagaaggctaaaaagaattctacaacatctgggaaa
aagcagaaaaagaaaactttagctgaaatcaaccaagaatggaatttagaggcaggaaaa
gaaaatagtgaaactgacttgaaagatgaatgtaaggaaaagctggtatccttttgtagc
caaccatctgttattgctagtccacccgtaaacgatgagatagacttactagcaagtggc
tctgtcatagaatgtgagcctttaggaaacttaactgaagccactttgcctctggctgag
caaatcgagtctccagacattgagaccaagagtgaagtgactcttgaggaggtctgtgaa
aactatcctacatctaaaagatctttgccattagatggaaaaggaaaacgtagacttccc
agtcctgtttctaagaaacgaagaagcagcactccaagcactagtagagattttcctaag
caaacagagatttcagaaaatgtgccattacctaattgttcctcaccaccatcaaacaaa
cgtaaagttggtaccacattgagcagaaaaagcagtaatgtaccagaggaatccctgaac
ctttcaccaggtactccaccttcttccttgaatagctcaacttacagacgaatgatgtcc
agccccttggtactgaagtcatctcctggtagccttatggctgggaaaaggaaccataga
ggagagactctgctccatgttgctgcaattaagggtgatgtgccttctgttgaatacctc
ttacaaaatggaagcgacccaaatgttaaagacaatgctggatggacaccattgcatgaa
gcatgcaatcatgggcacctgagggtggtggaattgttgctccagcacaaggccctggtg
aacagcacagggtaccagaatgattcccctcttcacgatgcagccaagaacgggcacctg
gatatagtaaagctcttgctgtcctacggagcctcgaggaatgctgttaacatatttggt
ctacggcctgtggattatacagacaatgaaaatatgaaatcactattgctgctaccagag
aagaatgaatcatcttcaactagacatggcttggtattgaacactgggcatcgtagggat
agacctcttatacttataggcagtggactttcttcagaacagcagaaaatgctcgatgag
cttgcagcaattcttaaagccaaaaaatgtacggagtttgacagtacagtaactcatgtc
attgttcctggtggcacacttcaaagtaccctgaagtgtatgctgggaattctcaatgga
tgctggatcctaaaatttgaatgggtaaaagcatgtctacaaagtaaaacttgtgaacgg
gaagaaaaatatgaagttcctgatggaccacaaagaagcaggctcaaccgagaacaactg
ttgccaaaactgtttgatggatgctacttctattttggaggaaccttcaaacaccttcca
aaggacaatcttattaagcttgtcactgcagcaggggggcaggttctcagtaggagaccc
aagccagacagtgatgtgactcaaactatcaacacagttgcataccatgcccaacctgat
tctgatcagcgcttttgcacacagtatatcatctatgaggatttctcccctcattatcac
ccagaaaggattcggcagggcaaggtctggatggccccatcaagctggtttataggctgt
gtgatggcctttgagttgcttcctcttgacagctga
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