KEGG   Oryctolagus cuniculus (rabbit): 100341002
Entry
100341002         CDS       T03373                                 
Name
(RefSeq) cadherin-5 isoform X1
  KO
K06533  cadherin 5, type 2, VE-cadherin
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04514  Cell adhesion molecule (CAM) interaction
ocu04520  Adherens junction
ocu04670  Leukocyte transendothelial migration
ocu05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    100341002
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    100341002
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100341002
 09160 Human Diseases
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100341002
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ocu04515]
    100341002
   04090 CD molecules [BR:ocu04090]
    100341002
Cell adhesion molecules [BR:ocu04515]
 Cadherins
  Major cadherins
   100341002
CD molecules [BR:ocu04090]
 Proteins
  100341002
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_FAT4_N Cadherin_2 Stevor
Other DBs
NCBI-GeneID: 100341002
NCBI-ProteinID: XP_051702818
LinkDB
Position
5:21874091..21912636
AA seq 784 aa
MQRPSMLVTALGACLGLLVAVIAAAGANPSELDTPSLLPAHRRQKRDWIWNQMHIDEEKN
TSLPHHVGKIKSSVNRKNAKYLLKGDSVGKVFQVNADTGDVYAFERLDREKISEYHLVAL
IVDKDTNRNLESPSSFTIKVHDVNDNWPVFTHRLFNASVPEMSSVGTSVTRVTAVDADDP
TVADHTSVMYQILKGDENFAIANSGIIFTTNKNLDRETQARYEIVVEARDAQGLRGESGT
ATVLITLQDVNDNFPIFTQTKYTFTVPEDIRVGSPVGSLSVEDPDEPQNRMTKYSIVQGE
YRDTFTIETDPTRNEGIIKPMKPLDYELIQQYIFTIEATDPTINLRYLSGISGRNKARVI
INVTDVDEPPVFQQHFYHFLLQENLKKPLVGSVLASDPDEARRSIGYSIRRTSDKGQFFR
ITKQGNIYNEKELDRETYPWYNLTVEAKELDSRGNPTGKESIVQVHIEVLDENDNAPEFA
QPYEPKVCENAAPGKLVVQISAIDKDTTPQNVKFKFALGTEDSNFTLTDNHDNTANITVK
YGQFDRERAKVHFLPVIISDNGRPSLTGTSTLAVVVCKCSEHGEFTFCEEAAAHAGVSIQ
ALVAIFLCILTITVITLLIFLRRRLRNQARAHGKSVPEIHEQLVTYDEEGGGEMDTTSYD
VSVLNSVRRGEAKAPRSALDARPSLYAQVQKPPRHLPGAQGPPGEMAAMIEVKKDEADQD
GGGPPYDTLHIYGYEGSESIAESLSSLGTHSSDSDVDYDFLNDWGPRFKMLAELYSDPRE
ELLY
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgcagcggccttcgatgctggtcaccgcattgggcgcctgcctgggcctgctggtggcg
gttatagcagcggcaggtgccaaccctagcgagctggacaccccaagcctgctgcctgct
caccggcgccagaagagagactggatctggaaccagatgcacattgatgaagagaagaac
acctcgctgccccatcacgtgggcaagatcaagtcgagcgtgaaccgcaagaacgccaag
tacctgctcaagggagactctgtcggcaaggtcttccaggtcaacgcagacacaggggac
gtgtatgccttcgagaggctggaccgggagaagatctcagagtaccaccttgttgccctc
atcgtggacaaggacaccaacaggaacctggagtctccgtccagcttcaccattaaagtc
cacgacgtgaatgacaactggcctgtattcacgcacaggctgttcaacgcgtccgtgccc
gagatgtcatctgtggggacctcggtcacgcgtgtgacagcagtggatgcggatgatccc
accgtggcagaccacacctctgtcatgtaccagatcctgaagggggatgagaactttgcc
atcgccaattccggaattattttcacaacaaataaaaacttggatcgagagacgcaggcc
aggtacgagatcgtggtggaggcacgagatgcccagggcctccggggcgagtctggaacg
gccaccgtgctgatcactctgcaggatgtcaacgacaacttccccatcttcacgcagacc
aagtacacatttactgtacctgaagacatccgtgtgggcagccccgtgggctcgctgtct
gtggaggacccagatgagcctcagaaccggatgacgaagtacagcatcgtgcagggcgag
tacagggacaccttcaccatcgagacggaccccacccgcaatgagggcatcatcaagccc
atgaagcccctggactatgaactcatccagcagtacatcttcaccatcgaggccacagac
cccaccatcaacctccgctatctgagcggcatctccggcaggaacaaggcccgcgtcatc
atcaacgtcacggacgtggatgagccccccgtcttccagcagcacttctaccacttcctg
ctgcaggagaacctgaagaaacctctggtcggctcggtactggcctcagatcccgacgag
gcccggcgcagcatcggatactccatccgcaggactagtgacaagggccagttcttccgc
atcaccaaacaggggaacatttacaacgagaaagaactggacagagaaacctacccctgg
tataacctgactgtggaggccaaagaactggattctcgggggaaccccacgggcaaagaa
tccattgtgcaggtccacatcgaagttctggatgagaatgacaacgccccagagttcgcc
cagccctatgagcccaaagtgtgtgagaatgcagcccccgggaagctggtggtgcagatc
tctgcgatcgacaaggacacaacgccacaaaatgtgaagttcaaattcgccctgggcact
gaagacagcaacttcaccctcacggacaaccatgataacacagccaacatcacggtcaag
tacgggcagtttgatcgggagcgagccaaggtccacttcctgccggtgatcatctctgac
aacgggaggccgagcctcacgggcaccagcactctggccgtggttgtgtgcaagtgcagc
gagcacggcgagttcacgttctgcgaggaggcagctgcgcacgcgggcgtcagcatccag
gcgctcgtggccatcttcctctgcatcctcaccatcacagtgatcaccctgctcatcttc
ttgcggaggcggctgcgcaaccaggcgcgcgcccacggcaagagcgtgcccgagatccac
gagcagctggtcacctacgacgaggagggcggcggcgagatggacaccaccagctacgac
gtgtcggtgctcaactctgtgcggcgcggcgaggccaaggccccgcggtcggctctggat
gcgcggccctccctgtacgcgcaggtgcagaagccgccgcggcacctgcccggggcgcag
ggcccgccgggggagatggcggccatgatcgaggtgaagaaggacgaggcggaccaggac
ggcggcgggcccccgtacgacacgttgcacatctacggctacgagggctccgagtccatc
gccgagtccctcagctccctgggcacccactcgtcggactccgacgtcgactacgatttc
ctcaatgactgggggcccaggttcaagatgctggccgagctgtactcagacccccgggag
gagctgttgtattag

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