Oryctolagus cuniculus (rabbit): 100341002
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Entry
100341002 CDS
T03373
Name
(RefSeq) cadherin-5 isoform X1
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04514
Cell adhesion molecule (CAM) interaction
ocu04520
Adherens junction
ocu04670
Leukocyte transendothelial migration
ocu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100341002
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100341002
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100341002
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
100341002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100341002
04090 CD molecules [BR:
ocu04090
]
100341002
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Major cadherins
100341002
CD molecules [BR:
ocu04090
]
Proteins
100341002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_2
Stevor
Motif
Other DBs
NCBI-GeneID:
100341002
NCBI-ProteinID:
XP_051702818
LinkDB
All DBs
Position
5:21874091..21912636
Genome browser
AA seq
784 aa
AA seq
DB search
MQRPSMLVTALGACLGLLVAVIAAAGANPSELDTPSLLPAHRRQKRDWIWNQMHIDEEKN
TSLPHHVGKIKSSVNRKNAKYLLKGDSVGKVFQVNADTGDVYAFERLDREKISEYHLVAL
IVDKDTNRNLESPSSFTIKVHDVNDNWPVFTHRLFNASVPEMSSVGTSVTRVTAVDADDP
TVADHTSVMYQILKGDENFAIANSGIIFTTNKNLDRETQARYEIVVEARDAQGLRGESGT
ATVLITLQDVNDNFPIFTQTKYTFTVPEDIRVGSPVGSLSVEDPDEPQNRMTKYSIVQGE
YRDTFTIETDPTRNEGIIKPMKPLDYELIQQYIFTIEATDPTINLRYLSGISGRNKARVI
INVTDVDEPPVFQQHFYHFLLQENLKKPLVGSVLASDPDEARRSIGYSIRRTSDKGQFFR
ITKQGNIYNEKELDRETYPWYNLTVEAKELDSRGNPTGKESIVQVHIEVLDENDNAPEFA
QPYEPKVCENAAPGKLVVQISAIDKDTTPQNVKFKFALGTEDSNFTLTDNHDNTANITVK
YGQFDRERAKVHFLPVIISDNGRPSLTGTSTLAVVVCKCSEHGEFTFCEEAAAHAGVSIQ
ALVAIFLCILTITVITLLIFLRRRLRNQARAHGKSVPEIHEQLVTYDEEGGGEMDTTSYD
VSVLNSVRRGEAKAPRSALDARPSLYAQVQKPPRHLPGAQGPPGEMAAMIEVKKDEADQD
GGGPPYDTLHIYGYEGSESIAESLSSLGTHSSDSDVDYDFLNDWGPRFKMLAELYSDPRE
ELLY
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggccttcgatgctggtcaccgcattgggcgcctgcctgggcctgctggtggcg
gttatagcagcggcaggtgccaaccctagcgagctggacaccccaagcctgctgcctgct
caccggcgccagaagagagactggatctggaaccagatgcacattgatgaagagaagaac
acctcgctgccccatcacgtgggcaagatcaagtcgagcgtgaaccgcaagaacgccaag
tacctgctcaagggagactctgtcggcaaggtcttccaggtcaacgcagacacaggggac
gtgtatgccttcgagaggctggaccgggagaagatctcagagtaccaccttgttgccctc
atcgtggacaaggacaccaacaggaacctggagtctccgtccagcttcaccattaaagtc
cacgacgtgaatgacaactggcctgtattcacgcacaggctgttcaacgcgtccgtgccc
gagatgtcatctgtggggacctcggtcacgcgtgtgacagcagtggatgcggatgatccc
accgtggcagaccacacctctgtcatgtaccagatcctgaagggggatgagaactttgcc
atcgccaattccggaattattttcacaacaaataaaaacttggatcgagagacgcaggcc
aggtacgagatcgtggtggaggcacgagatgcccagggcctccggggcgagtctggaacg
gccaccgtgctgatcactctgcaggatgtcaacgacaacttccccatcttcacgcagacc
aagtacacatttactgtacctgaagacatccgtgtgggcagccccgtgggctcgctgtct
gtggaggacccagatgagcctcagaaccggatgacgaagtacagcatcgtgcagggcgag
tacagggacaccttcaccatcgagacggaccccacccgcaatgagggcatcatcaagccc
atgaagcccctggactatgaactcatccagcagtacatcttcaccatcgaggccacagac
cccaccatcaacctccgctatctgagcggcatctccggcaggaacaaggcccgcgtcatc
atcaacgtcacggacgtggatgagccccccgtcttccagcagcacttctaccacttcctg
ctgcaggagaacctgaagaaacctctggtcggctcggtactggcctcagatcccgacgag
gcccggcgcagcatcggatactccatccgcaggactagtgacaagggccagttcttccgc
atcaccaaacaggggaacatttacaacgagaaagaactggacagagaaacctacccctgg
tataacctgactgtggaggccaaagaactggattctcgggggaaccccacgggcaaagaa
tccattgtgcaggtccacatcgaagttctggatgagaatgacaacgccccagagttcgcc
cagccctatgagcccaaagtgtgtgagaatgcagcccccgggaagctggtggtgcagatc
tctgcgatcgacaaggacacaacgccacaaaatgtgaagttcaaattcgccctgggcact
gaagacagcaacttcaccctcacggacaaccatgataacacagccaacatcacggtcaag
tacgggcagtttgatcgggagcgagccaaggtccacttcctgccggtgatcatctctgac
aacgggaggccgagcctcacgggcaccagcactctggccgtggttgtgtgcaagtgcagc
gagcacggcgagttcacgttctgcgaggaggcagctgcgcacgcgggcgtcagcatccag
gcgctcgtggccatcttcctctgcatcctcaccatcacagtgatcaccctgctcatcttc
ttgcggaggcggctgcgcaaccaggcgcgcgcccacggcaagagcgtgcccgagatccac
gagcagctggtcacctacgacgaggagggcggcggcgagatggacaccaccagctacgac
gtgtcggtgctcaactctgtgcggcgcggcgaggccaaggccccgcggtcggctctggat
gcgcggccctccctgtacgcgcaggtgcagaagccgccgcggcacctgcccggggcgcag
ggcccgccgggggagatggcggccatgatcgaggtgaagaaggacgaggcggaccaggac
ggcggcgggcccccgtacgacacgttgcacatctacggctacgagggctccgagtccatc
gccgagtccctcagctccctgggcacccactcgtcggactccgacgtcgactacgatttc
ctcaatgactgggggcccaggttcaagatgctggccgagctgtactcagacccccgggag
gagctgttgtattag
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