Oryctolagus cuniculus (rabbit): 100341042
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Entry
100341042 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 9
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100341042
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100341042
Transporters [BR:
ocu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100341042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
SMC_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
100341042
NCBI-ProteinID:
XP_051681097
LinkDB
All DBs
Position
19:complement(50335203..50416232)
Genome browser
AA seq
1510 aa
AA seq
DB search
MSKRHISLRHQTWALLCKNCLKKWRIKRDTLLEWFFSFLLVVFAYLFSSNLHQVIDSQMP
AMDLGCVDNFNDSNYIIVFTPETKTTQEIMSKVASVPFMKGRTVMGWRAEKSTDELGLNE
STDAVRVIFKDTFSYHLKFSWGHRIPKMKEHRDHSAHCQVLDEKITCASSVFWEKGFVAF
QAAINAAIIEITTNHSVMEELMLVTGITMKIVPFVAQGGVATNFFIFVCIISFSAFIYYL
SVNVTQERQNIKALMKMMGLRESAFWLSWGLVYAGFISIMAVLMTLIIKSAEVVILTDFM
LIFTLFLLYGLSLITLAFLMSVLIKKPLLTGLVIFLLIVFWGSLGFTALYRHLPAFLEWS
LCLLSPFAFTAGMAQLIHLDYDVCSNAHLDSPNNPYLVAATLFMLVFDAFLYLMLTLYFD
KILPTEYGHQNSPLFFLKSSFWFQHQRANHVVLENEIDFDHFSDDSFEAVSPEFHGKEAI
RIKNLTKEYAGKHEKVEALKGLVIDIYEGQITALLGHSGAGKTTLLNILSGLSVPTXGSI
TIYNHTLSEMAHMETASKFTGVCPQSNVQFGFLTLKENLRLFVKIKGILPHEVEQEVQXV
LRGLDMENIQDILALTLSGGQKRKLTFGIAILGDPEVLLLDEPTAGLDPLSRHXVWNLLK
ERKSDKVILFSTQFMDEADILADRKVFISNGRLKCAGFSLFLKKKWGIGYHLSLHLNEMC
DPENIATLIKQRIPDAKLTAQSEEKLVYILPLERTCKFPELCRDLDRCCDQGIENYGVSM
TTLNEVFLKLEGKSTIDEKDGGIQEQVQSDHLKDKRSHVELGQVLSSLNETRTTINGMAL
WRQQLCAIAKVRFLKLKNERKSLLAMLMLFGISFFPQLLGYLLYELYQKSYSWSLSPHLY
FLSPGQPPQDPLIYLLIINKTGSSIDNFIXSLRXQNIALDVDAFGIRNGAGESSYNGAIM
VSGDAKDHRFSIACNTKRLNCFPVLMDIISNGLLGMFNSLEQIQTDRAHFLKXHRSHEYE
YLSNAFFWILAAACFTPYIAMSSISDYKQKIHSQLWISGLYPSAYWFGQALVDVPLYFLI
LLLMQIIDYVFSPDEIIFIIQNLLIQILCSIGYVSSLVFLTYVISFICCNGRKNSGIWSF
FFLILSIHMITIFSLVATDLNEYGFLGLLFTTILIPPFTLTGSLLIFSEISHDSMDYLGT
SASQFVFLALLIPYFHFFIFLFALRCLERNFRKKSMRRDPVFRISPRSSXCFPNPEEPEG
EDEAVQMERMRTANVVTLPDADEKPVIIASCLRKEYEGKRKNCFSKRKEKXATRNVSFCV
KRGEVIGLLGHNGAGRSTTIKMIAGDTKPTAGQTHPPSYQKPLHMMAEPRTSIFNSCSLL
MHGNSIQHLKSKFGKDYLLEMKVKTPHQVEPLHGEILRIFPQAARQERXIQELYSSLLVY
KLPVEDVQPLSQAFVKLERAKQSFDLEEYSLSQSTLEQVFLELSKEQELDDLDGELDPSV
KRKLLPQEEP
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggcacataagcttgcgtcatcaaacgtgggctcttctttgcaagaactgt
cttaaaaagtggagaataaaaagagacaccttgttggaatggtttttctcatttcttcta
gtagtgtttgcatatctattttcttccaatttacatcaagttattgactctcaaatgcct
gcaatggatctgggatgtgtagataattttaatgattctaattatattattgtatttaca
cctgaaaccaaaactactcaagagataatgagcaaagtggcttcagtcccattcatgaag
ggaagaacagtcatggggtggcgtgctgaaaaaagcacggacgaattgggcttaaatgaa
tcaacggatgcagtgagagtcatctttaaggataccttctcatatcacttaaagttttct
tgggggcatagaatccccaagatgaaagaacacagagatcattcagctcattgtcaagta
ctggatgaaaaaataacgtgtgcgagttcagttttctgggagaaaggctttgtagctttt
caagctgccattaatgctgctatcatagaaatcacaacaaatcattcagtgatggaggag
ttaatgttggttactggtataactatgaagatagtaccatttgttgcccaaggaggagtt
gcaactaattttttcatttttgtctgcattatttctttttctgcattcatatattattta
tcagtcaatgttacacaagaaagacaaaatattaaggcattgatgaaaatgatgggactt
cgagagtcagcattctggctttcctggggtttggtgtatgctggtttcatcagtattatg
gccgttttgatgactcttattataaaatctgcagaagttgtcatcctaactgatttcatg
ctgatcttcacactttttctactctatggcctgtctttgataactttagctttcctgatg
agtgtgctgataaagaaacctctccttactgggctggtcatctttctccttattgtcttc
tggggaagcttgggattcacagcattgtacagacatcttcctgcatttttggaatggtcc
ctatgtcttcttagcccttttgccttcactgctggaatggcccagcttatacatttggac
tatgatgtatgttctaatgcgcatttggattctccaaacaacccatacctagtagcagcc
actcttttcatgctggtttttgatgcttttctgtatttgatgttgacattatattttgac
aaaattttgcccactgaatatggacatcaaaactctcctttgtttttcctgaaatcctct
ttttggtttcaacaccaaagagctaatcacgtggtccttgagaatgaaatagattttgac
catttttctgatgactcttttgaagcagtgtctccagaattccatgggaaagaagccatc
agaatcaaaaatcttacaaaagaatatgcaggaaagcatgaaaaagtagaagctttgaaa
ggtctggtgattgacatatatgaaggccagatcactgccctgcttggtcatagtggagct
gggaaaaccaccctgttaaacatactcagtgggctatcagtcccaacataaggttcgatc
accatttataatcacacactatcagaaatggctcacatggaaactgccagcaagttcact
ggagtgtgtccacaatccaatgtgcagtttggctttctcactttgaaagaaaacctcagg
ctgtttgttaaaatcaaagggattctaccacatgaagtggagcaagaggtacaatgagtt
ttgaggggcttagatatggaaaatatacaagacatacttgctctaactttaagcggtgga
caaaaaaggaagctaacctttgggattgccattttaggagatcctgaggttttgctcttg
gatgaaccaactgctggattggatcctctttcaaggcactgagtatggaatctcctaaaa
gagagaaaatcagacaaagtaattctcttcagtacccagttcatggatgaggctgacatt
ctggctgataggaaggtgtttatatccaatgggaggctgaagtgtgcaggtttttcccta
ttcctgaagaagaaatggggtattggctaccatttaagtttgcatctgaatgaaatgtgt
gatccagaaaatatagcaacactaattaaacagcgcatccctgatgccaaattaacagca
caaagtgaagaaaaacttgtgtatattttgcctttggaaagaacatgcaaatttccagaa
ctttgcagagatcttgatcgatgttgtgaccaaggcattgagaattatggtgtttccatg
acaactctgaatgaggtgttcctcaaattagaaggaaaatcaactattgatgaaaaagat
ggtgggattcaggaacaagtacaaagtgatcacttgaaagataagagaagccatgttgag
ctggggcaagttttgtcttccttaaatgaaacaagaacaacaatcaatggcatggctctc
tggaggcagcagctctgtgctatagcaaaagttcgcttcctaaagttaaagaatgaaaga
aaaagcctgctggcaatgttaatgctctttggaattagtttttttcctcaacttttggga
tatctcctctatgaattatatcaaaaaagttactcctggagcctgtccccacatttgtac
ttcctctcaccaggacaaccaccacaagatcctctgatttatttactgatcatcaataaa
acaggatcaagcattgataactttatataatccctaagatgacagaatatagctttagac
gtggatgcctttggaattagaaatggtgcaggtgaatcatcgtacaatggtgctatcatg
gtctctggtgatgcaaaggatcacagattttcaatagcatgtaataccaaaaggctgaat
tgttttcctgtcctgatggatatcattagcaatgggctacttggaatgtttaattctttg
gaacagattcaaactgacagagcacattttttgaagtaacacaggtctcatgaatacgag
tacctgagtaatgccttcttctggatactagcggcagcctgcttcactccttatattgcg
atgagcagcatcagtgactacaaacaaaaaatacattcccagctttggatctcaggcctc
tacccttctgcttactggttcggacaggccctggtggatgttcccttgtacttcttgata
cttctcctaatgcaaataatagattatgtttttagcccagatgagattatatttataatt
caaaacctgctaattcagatcctgtgcagtattggatatgtctcatctcttgttttcttg
acatacgtgatttcattcatttgttgcaatggtaggaaaaatagtggcatttggtcattt
ttcttcttaattttaagtatacatatgattaccatcttttcgttagttgccacagatctc
aatgaatatggatttttaggactacttttcaccaccatattaataccacccttcacactg
actggctctctattaattttctcagagatttctcatgactctatggattacctcggaact
tcagcatcgcaatttgtgtttctggcattgctaattccttactttcattttttcatcttc
ctttttgctctgcgatgtctggaaaggaactttaggaagaaatcaatgagaagggatcct
gtgttcagaatttctccaagaagcagcnaatgttttccaaacccagaagagcctgaagga
gaggatgaagctgttcagatggaaagaatgagaacagcgaatgttgtgactctcccagat
gctgatgagaaaccagtcatcattgccagctgtctacggaaagaatatgaaggcaaaagg
aaaaattgcttttccaaaaggaaggaaaaanctgccacaagaaatgtctctttctgtgtt
aaaagaggtgaagttatagggctgttaggacacaacggcgcgggtagaagcacaactatt
aagatgatagctggagacacaaaaccaactgcagggcagactcatccgccatcataccag
aaaccactgcatatgatggcagagccgcgaacctccatatttaacagctgctctctgctt
atgcatggtaattccatccaacacctgaaaagcaaatttggcaaagattatctgctagag
atgaaagtgaaaaccccccaccaagtggagcccctgcatggagaaattttgaggattttc
ccccaggctgctcggcaggaaagataaattcaggagctgtattcctccttgttggtctac
aagttgcctgttgaagatgtgcaacctttatctcaggctttcgtcaagttagagagagct
aaacagagcttcgacctggaggagtacagcctctcccagtccaccctggagcaggttttc
ctggagctctccaaggagcaggagctggatgacttggatggggagcttgatccctcagtg
aagcggaagctcctcccacaggaagagccttaa
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integrated database retrieval system
