Oryctolagus cuniculus (rabbit): 100341155
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Entry
100341155 CDS
T03373
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocu01009
]
100341155
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100341155
Protein phosphatases and associated proteins [BR:
ocu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100341155
Membrane trafficking [BR:
ocu04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
100341155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
DCP1
SBP_bac_6
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
100341155
NCBI-ProteinID:
XP_008252569
Ensembl:
ENSOCUG00000002143
UniProt:
G1SGX1
LinkDB
All DBs
Position
2:122680518..122807872
Genome browser
AA seq
977 aa
AA seq
DB search
MASSHSSSPVPQGSSSDIFFKKEVDPSKHIRPVQSLPDVCPKEPTGDSSSLCVAPSLVAD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTIY
QQEISQREKIHERCKTICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGSRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVFNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEDDCQVLEEERLVSLVFGLLKQRKLNFLEIYGEEMIITAKNIIKQCVINK
VSQIEEIDTDLVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL
DKNQRTRELEEISQQKNVAKDNSLDTEVAYLIHEGMFISDAFSEGELTSIAVDTTSQRNA
SPSSEPCSSDSVSEPECTTDSSSSKEQTSSSATPGGVDIMVSEDMKLTDLELGKLANNIQ
ELLYNASDICHDRAVKFLTSRAKDGFLEKLNSTEFITLSRLMEAFILDTEQICGKKSMSL
LGALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDCISDGKIALPEKKS
GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQSNML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEA
IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
GLKDLDLNMAEIWEQKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatattttcttt
aagaaagaggtagatccatcaaaacatattcgacctgtgcagtcactccccgatgtgtgt
cccaaggaacccacaggtgattcaagtagtttatgtgttgccccatctctagttgcagat
caacatagatggactatatatcattccaaagtaaatctcccagcagcattaaatgatcct
agattagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggac
actgaagtcataccttcattctacctcccacagatcagcaaggaacattttacaatttat
caacaggaaatttctcagagagagaagattcatgagagatgcaagactatttgtcctccg
aaagatacctttgacaggactcttttacatactcatgataaatccaggacagatctggag
caagtacctaagatttttatgaagccagattttgccttggatgactccttaacttttaat
tcagttttaccgtggtctcattttaatactgctggtggaaaaggaagtcgtgatgcagct
tcctcaaagttgcttcaagaaaagctgagccattatctggatattgtggaagtaaatatt
gctcaccagatctctctacgttcagaagcattttttcatgcaatgacctctcaacatgaa
ttgcaggactacctcaagaaaacttcccaggctgtaaaaatgcttcgagataaaattgca
caaattgataaagttatgtgtgaaggatcactacacattttaagactggcacttactaga
aataattgtgttaaagtgttcaataaactgaagttaatggctactgttcatcagactcag
cctacagtgcaggtgttattatctacttcagaatttgttggagcattggacttaatagca
acaacacaagaggttctacagcaggaacttcagggcattcacagtttccggcatttggga
tcacagctctgtgaactagagaaactgatagataaaatgatgattgcagaattttctact
tattctcacagtgacttaaatagaccactggaagatgactgtcaagttttagaagaggaa
agactagtgtctcttgtatttggactgttaaaacaaaggaaacttaattttttagaaatc
tatggtgaagaaatgattattacagcaaaaaatatcattaaacagtgtgtgattaataaa
gtttcacaaatagaggaaatagatacagatcttgttgtgaagcttgcagatcaaatgaga
atgttgaattttccccagtggtttgatctgctaaaagatattttctctaagtttacaatt
ttcctccagagagttaaggcaacattaaatatcattcacagtgttgttctctcagttctt
gacaaaaaccaaaggactagagaattggaagagatttcacaacagaagaatgttgcaaaa
gataattcactggacacagaagtggcttatttaatccatgaaggcatgtttataagtgat
gcattcagtgagggtgaattaacatctatagcagttgacactacctctcaaagaaatgca
tctccaagtagtgagccatgcagcagtgattcagtatctgaaccagaatgtactactgat
tcttcatccagcaaagagcagacatcatcatctgctactccaggaggtgtggatattatg
gtcagtgaagatatgaaattaactgatttagagctaggaaagttggcaaataatatccag
gaattattgtataatgcttcagatatatgtcatgatcgagctgtcaagtttctcacatca
agagcaaaggatggttttcttgagaaactaaattccacggaattcataacactttctaga
ttaatggaagcatttattttagacactgaacagatttgtggaaaaaaaagcatgtcatta
cttggagcacttcagagccaagctaataaatttgtgaataggtttcatgaagagaggaaa
accaagctaagcctcctcttagacaatgagcggtggaagcaagctgatgttcctgcagaa
tttcaggatcttgttgattgtatatcagatggaaaaattgctttacctgaaaaaaaatca
ggagctacagaagaaagaaaaccagctgaagttctgattgttgagggacaacagtatgct
gttgttggaactgtactgctgttaataagaattattcttgaatattgccagtgtgtggat
aacatcccatctgttactactgacatgcttactcgtctgtcagatttattgaagtacttc
aattcaagaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaa
acaataactacaaaaaatttggctctttcttcaagatgcctacagttaattgtgcactac
attcctgtgatccgggctcattttgaagctcgactaccacctaagcaaagtaacatgctt
aggcattttgatcatatcactaaggactatcatgatcacatagctgaaatatcagctaag
cttgtagcgataatggatagcttatttgacaagctgttgtcaaagtatgaggtgaaagct
cctgttccttctgcctgtttcaggaatatttgtaagcaaatggcaaaaatgcatgaagct
atatttgatctccttccagaagagcaaacacaaatgctatttttaagaattaatgcaagt
tacaaactccacttgaaaaagcagttatctcacttaaatgtgataaatgatggaggacct
caaaatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaa
ggccttaaagatttggacctaaatatggctgagatctgggaacagaagaggtga
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