Oryctolagus cuniculus (rabbit): 100341171
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Entry
100341171 CDS
T03373
Name
(RefSeq) glucosylceramide transporter ABCA12 isoform X1
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100341171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100341171
Transporters [BR:
ocu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100341171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
DUF4162
Motif
Other DBs
NCBI-GeneID:
100341171
NCBI-ProteinID:
XP_051704194
Ensembl:
ENSOCUG00000017926
LinkDB
All DBs
Position
7:17136103..17321799
Genome browser
AA seq
2596 aa
AA seq
DB search
MTSHFRQLRILVWKNWLGVKRQPLWTLVLILWPVIIFIILAITRTKFPPTAKATCYLAPR
NLPSTGFFPFLQTLLCDTDSKCKDTPYGPQDLLRRKGIDDALFKDSETLRKSSKLEKDSN
LSLQSTPVPERRHASLATKFPSPSSDLKSYETDTFNGSQVLAWILGLEKLLKQNSTSEDI
RKELCKGHPGYNEDYAFSWITVGKNVFNKFCFSNMTLLESSLQELNKQFSQISSDPNNQK
LVFQEMARVLSLFSQVQEQTAVWQLLSSFPNVFQNETSLSNLFDVLQKANGVLLMVQKVY
PRAETNDGFRTVQKSVKHLLYTLDSPAQGGSVNTTHVWNEDDEQILSPSSLAAQLLILEN
FEDSLLNISANSPYLPYLACVRNVTDNLAKGSEENLRLLQSTIRFKKSFLQNSSYEDYFP
SVPEVLKSKLSQLRNLTKLLCESETFNSIEKSCPLSNMSFGSLCEESVFHVQLLEAAELG
TELATSLLYHDNILSKKLRDLLTGDPSKINLNMDQFLEEALQMNYLENITQLMPTIEAML
HVNNSADASEKPGQLIEMFKNIEALKEELKQMTGMSNSSIDKLLAIPIPDNRAEIISQVF
WLHSCETNTTNPKLEDAMKEFCSLPLPERARQSYLIGLTLLHYLDIYNFTYKVFFPREDQ
KPVEKMIELFIRLKEILNQMASGTHPWLDKIRSLRQMHLSRSVPLTQAMYRSNRMNTPQG
SFTTISQALCSQGITTDYLTAMLPSSQKPKGNHTKDFLTYKLSKEQIASKYGIPIHTTPF
CFSLYKDIINMPAGPVIWAFLKPMLLGRILYAPHNPITKAIMEKSNVTLRQLAELREKSQ
EWMDKSPIFMNSFHLLNQAIPMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDELDILRLK
LENNIDIIDQLNTLSSLTVNISSCVLYDRIQALETIDEMEREAKRLSKSNELFGSVIFKL
PSNRSRHRGYDSENIFLPPVIKYTIRMSLKTAQTTRSLRTKIWAPGPHNSPSHNQIYGRA
FVYLQDSIERAIIELKTGRNSQEIAVQVQAIPYPCFMKDNFLTSVSYSLPIVLMVAWVVF
IAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVGFLLITITILIIILKFGNILP
KTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYVIAFFPFIVLITVEDEL
SYVVKVFVSLLSPTAFSYASQYIARYEEQGIGMQWENMYSSPVQDDTTSFGWLCCLILAD
SFIYFLIAWYVRNVFPGTYGMAAPWYFPILPSYWKERFGCAEVKHEKSNGLMFTNIMMQN
TNPSVSKTSPECMFPSNIEPEPRDLTVGVALHGVTKMYGSKIAVDNLNLNFYEGHITSLL
GPNGAGKTTTISMLTGLFGTSAGTIFVYGKDIKTDLDTVRKNMGVCMQHDVLFSYLTTKE
HLLLYGSIKVPHWTRKQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGS
RVVILDEPSTGVDPCSRRSIWDVICKNKTARTIILSTHHLDEAEVLSDRIAFLEQGGLRC
CGSPFYLKEAFGDGYHLTLTKKKSPNLSASTVCDTMAVTAMIRSHLPEAYLKEDIGGELV
YVLPPFSTKVSGAYLSLLRALDKDMGTLNIGCYGISDTTVEEVFLNLTKDSQKTTNMSLE
HLTQRKIGNSSANGISTPDDLSLSSSNFTDRDDKILTSGERLDGVGLLLKKIMAILIKRF
HHTRRNWKGLIAQVILPIVFVTTAMGLGTLRNSSNDYPEIQISPSLYGTSDQTAFYANSH
PSTNALVSAMWNFPGIDNLCLNTSDLQCLKRESLGKWNTSGEPITNFGVCSCSKNVQECP
QFNYSPPHRRTYSSQVIYNLTGHRMENYLISTANEFVQKRYGGWSFGLPLTTDLRFDITA
VPANRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSEYDAARHGIIMYSHPYPGVQDQE
QATISSLIDILVALSILMGYSVTTASFVTYVVREHQTKAKQLQHISGIGVTCYWVTNFIY
DMVFYLVPVTFSIGVIAIFKLPAFYSENNLGAVSLLLLLFGYATFSWMYLLAGLFHETGM
AFITYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGYGLI
ELSQQQSVLDFLKAYGVEYPSETFEMDKLGAMFVALVAQGTMFFLLRLLINEWLIKKFRL
FFRKFNSSPVMETIDEDEDVQAERLRVESGAAEFDLVQLHRLTKTYQLIHKKIVAVNNIS
IGIPAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKTGSLGHVDSHSSLVGYCP
QEDALDDLVTVEEHLYFYARLHGIPEKDIKETVHKLLRRLHLMPYKDRPTSMCSYGTKRK
LSTALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQSKCSVILTSHSMEECEALCT
RLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHLKNDKVSMETLTRFMQLHFPKTYLKDQH
LSMLEYHVPVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKDQKSYETTDT
SSQGSTTSVDSQDDQL
NT seq
7791 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccattttcggcagcttcggatcctggtctggaaaaattggcttggtgtcaaa
agacagccgctttggacacttgttttaatcttatggccagtcattattttcataattttg
gctattaccagaacaaaatttcctccaacagcaaaagcaacctgttatcttgctcctcga
aaccttcctagtactggcttcttcccattcctgcaaactctactctgtgacactgactct
aagtgtaaggacacaccttacgggccacaagatctgcttcgccggaaaggaattgatgat
gcactattcaaagacagtgaaactctgagaaagtcatccaagctggagaaggacagtaat
ctatcactccagagcaccccagttccagagagaaggcacgcatcgctggccacaaaattc
cccagtccaagttctgatttgaaaagttatgaaacagatacttttaatggcagtcaagtt
cttgcatggatccttggcttggaaaagctgttaaagcaaaattcaacttcagaggacata
cgaaaagaactgtgtaagggccatccaggatacaatgaggattatgccttctcttggatc
actgtgggaaaaaatgtttttaacaaattttgcttttccaacatgacccttctagagtct
tctcttcaagaactaaacaaacagttctctcagatatcaagtgaccccaacaatcagaag
cttgtgttccaggaaatggcccgagtgctgtccctcttctcccaagtgcaggagcagaca
gctgtgtggcagctcctctctagttttccaaatgtgtttcagaatgaaacatcgctaagc
aatctgtttgatgttcttcaaaaggcaaatggggtgctgctgatggtgcagaaggtttac
ccacgtgctgaaactaatgacggcttcagaaccgtccagaagtctgttaaacatctgctg
tacactctggactccccagctcaaggtggctctgttaacacaacacatgtgtggaatgaa
gatgatgagcagatactctctccaagcagtctggctgcacagcttctgatcctggagaac
tttgaagattctctcttaaatatatcggcaaatagtccttatcttccttatttggcatgt
gtgagaaatgtcactgacaatttggccaagggatcagaagaaaatctaagactcctgcaa
tccacaattcgatttaaaaaatcttttcttcaaaatagttcctatgaggattacttccct
tcagttcctgaagtcctaaaatcaaaactgtctcaacttcgaaacctgaccaaacttctt
tgtgagtctgaaactttcaattcaatagaaaaatcgtgcccgctgtctaatatgagcttt
gggagcctctgtgaagagagtgtgtttcatgtgcaactcctcgaagcagcagagctgggc
actgaactagcaaccagcttactgtaccatgacaatatcttatctaagaaactgagggat
ttgctgactggggatccaagcaaaattaacttaaatatggatcagttcctagaagaggca
ttgcaaatgaattacttggaaaatatcactcagctaatgccgaccattgaagccatgctg
catgtcaataacagtgcagatgcttctgaaaaaccaggtcagctaatagaaatgtttaaa
aatattgaagcgctgaaagaagaactgaagcaaatgacaggaatgtccaacagcagcatc
gacaagttgctagctattccaatccctgataacagagctgagattatttctcaagtgttc
tggttgcattcttgtgaaactaacactaccaatcccaaactagaggatgcaatgaaggaa
ttctgtagcctgcctcttcccgagagagcccgccagtcttacctcatcggacttactctc
ctgcactacctggacatttacaacttcacatacaaggtgttttttcctagagaagatcaa
aaacctgtggaaaaaatgatagaactcttcataagactgaaagaaattctcaatcagatg
gcttctggcacacatccgtggctagacaaaataagatccctgagacaaatgcatctgtcc
agaagtgttccattaacacaggccatgtacagaagcaacagaatgaatacaccacaagga
tcatttactaccatctcccaagccttgtgttcccaaggaattaccactgattatttaact
gccatgctgccctcttcccagaagccaaaaggcaatcataccaaggattttttgacttac
aaattaagtaaagaacaaattgcttcgaagtatggaattcccatacataccacaccattt
tgcttctccctttataaagacatcattaatatgccagctggacccgtgatttgggctttc
ctgaaacctatgttgctgggaaggattttatatgccccacataacccaattacaaaggca
atcatggaaaagtctaatgtaactctgaggcagctggcagaattaagagaaaaatctcag
gagtggatggataagtcgccaattttcatgaattccttccatctgttaaaccaagcaatt
ccaatgctccagaatactctgaggaacccctttgtgcaagtttttgtgaagttctccgtg
ggacttgatgctgtggagcttttgaagcagatagatgagcttgatattctgcggctgaaa
ttagaaaacaacattgacatcattgatcagcttaacacactatcttctctgacagtaaat
atttcctcttgtgtattgtatgaccgtattcaagcattagaaaccatagatgaaatggag
agagaggctaaaaggctctctaaaagcaatgaactctttggaagtgttatttttaagctt
ccctctaacagaagccggcacagaggctatgactctgaaaatatctttcttcctcctgtc
ataaaatataccatccgcatgagcctcaagactgcacagaccacacgaagcctaagaacc
aagatctgggccccggggccacacaactctccatcacacaatcagatctatggcagggct
tttgtttatttacaggatagtattgaaagagcaatcattgaattgaaaactggcagaaac
tctcaggaaatagcagttcaagttcaggcaattccttatccatgcttcatgaaagacaat
ttcctaaccagtgtctcttattctcttccaattgtgctcatggttgcctgggttgtattt
atagctgcttttgtaaaaaagcttgtttatgagaaagatctgaggcttcatgagtacatg
aagatgatgggtgtgaactcctgcagccatttttttgcctggcttatagagagtgttgga
tttttactgattaccatcacaatcctcatcattatactcaagtttggcaatattcttcct
aaaacaaatgggttcattttgttcctgtatttttcggactacagtttctcagttattgcc
atgagctatcttatcagtgtcttcttcaacaacaccaacattgcagctctaattggaagc
ctcatctatgtcattgccttttttccatttattgttctgattacggtggaggatgaactg
agctatgtagttaaagtattcgtgagtcttctgtccccaacagcattcagctatgcaagc
caatacattgcacgatatgaggaacagggcattggcatgcaatgggaaaatatgtacagt
tccccagtgcaggatgacaccacctcatttggctggctgtgctgtctaatcctagctgac
tctttcatttatttccttattgcttggtatgtcaggaatgttttcccagggacatatggt
atggcagccccatggtattttccaatccttccttcctattggaaggagagatttggatgt
gcagaggtgaaacatgagaaaagcaatggccttatgtttactaatatcatgatgcagaac
accaacccatctgtcagtaagacaagtcctgagtgcatgtttccttccaacattgagcct
gaacctagagatctcacagtgggggtagctctgcatggcgtcacaaagatgtatggctca
aaaattgccgttgataacctcaatttgaacttttatgaaggccatattacttcattgctg
ggacccaatggagctgggaaaactacaaccatctctatgttaactgggctattcggaacc
agtgccggtaccatctttgtgtatggaaaagatatcaaaacagacctagacactgtccgg
aagaacatgggggtctgtatgcagcacgatgtcttgttcagctacctcactaccaaggaa
caccttctcctgtatggctccatcaaagttcctcactggacgagaaagcagctccacgag
gaagtgaaaaggactttaaaagatactggactatacagccatcgtcataaaagagttgga
acactgtcgggaggaatgaagaggaagttatctatatccatagctctcatcggtggatcg
agggtagtaattctggatgaaccatccactggagttgatccatgttctcgccgaagtata
tgggatgttatatgtaaaaacaaaactgccagaacaatcattctgtcaacacaccacctg
gatgaggctgaagtgctgagtgaccgcattgccttcctggagcagggtgggctcaggtgc
tgtgggtcccctttttatctcaaggaagcctttggggatggctatcatctcacactcacc
aagaagaagagtccaaatctcagcgcaagtacagtctgtgacacaatggccgtgacagcg
atgatccgatcacatctcccagaagcctacctcaaagaggatattgggggagagctggtt
tatgtgctccctccattcagcactaaagtctcaggagcctacttgtcactcctaagagca
ctggacaaggatatgggtaccctcaacatagggtgctatggcatttcagataccaccgtg
gaagaggtttttctgaacttaactaaagactcacaaaaaactactaatatgagtctggag
cacttaacacaaaggaaaattgggaattccagtgcaaatggcatctcgactcctgatgat
ttgtctctgagcagcagcaatttcacagaccgagatgacaaaatcctgacgagtggagaa
aggttggatggtgtggggctgctactgaaaaagataatggccatcctcatcaagaggttc
caccacacgcgcaggaactggaaaggccttatcgcacaggttatcctccctattgtcttt
gtaaccactgctatgggccttggtactctgagaaattccagcaacgattatccagagatc
cagatctccccctctctctatggtacctcggatcagacagccttctatgcgaattctcac
ccaagcacaaatgcattggtctcagcaatgtggaattttcctggcattgacaatctgtgt
ctgaacaccagtgatctgcaatgtttaaagagagagagtctggggaaatggaacaccagt
ggagaacctatcactaattttggtgtttgctcctgctcaaaaaatgtccaggaatgtcct
caatttaattactctccacctcatagaagaacttattcttctcaagtaatttataacctc
actgggcaccgcatggaaaattatcttatatcaactgcaaatgagtttgtccaaaaaaga
tatggaggttggagttttgggctgcctttgactacagaccttcgttttgatataacagcg
gttcctgccaatagaacacttgccaaggtgtggtatgatccagagggctaccactccctt
ccagcttacctcaacagcctgaacaatttcctcctgcgagttaacatgtctgaatacgat
gctgcccgacatggtatcatcatgtatagccatccttatcctggagtacaagaccaagaa
caagccacaatcagcagtttaatcgatattttagtggcactgtccatcctaatgggctac
tccgtcacgaccgccagctttgtcacctacgttgtaagggagcatcagacaaaggccaag
cagctgcagcacatttcaggcattggtgtgacgtgctactgggtaacaaacttcatatat
gacatggtcttctacttggtacctgtaacattttcaattggtgtcattgcaattttcaaa
ttacctgccttctatagtgaaaacaacctaggtgctgtatctctcctgcttctgctgttt
ggatatgcaacgttttcatggatgtacttactggctgggctcttccatgaaacaggaatg
gcctttatcacttatgtctgtgtcaacttgttttttggcatcaattccattgtttccctg
tctgtggtatactttctttccaaggaaaagcctaatgatccgactttagaacttatttct
gaaaccctcaagcgcattttcctgattttcccacaattctgttttggctatggtttgatt
gaactttctcaacaacagtcagtcttagacttcttaaaagcatatggagtggaataccca
agtgaaacctttgagatggataaactgggagcaatgtttgtggctttggttgctcagggt
accatgttctttctcttgcgactcctaatcaatgagtggctaatcaagaaattcagactc
ttcttcaggaaatttaattcttcacctgtaatggagacaatagatgaagatgaagatgtg
caggctgagagattaagagttgagagtggtgcagctgaatttgacctggtccaactccat
cgtctcacaaagacctaccagcttatccacaaaaagattgtagctgtaaacaacatcagt
attgggatacctgctggagagtgcttcggccttcttggggtgaatggagcaggaaagact
actatattcaagatgctgactggagacataattccttcaagtggaaacattctgatcaga
aataagactggatctctgggtcatgttgactctcacagctcattagttggctactgccct
caggaagatgccttagatgatctggtaactgtggaagaacatttgtatttctatgccagg
ctacatggaattccagagaaggatattaaagaaactgtacataaactcctgaggagactt
cacctgatgccctacaaggaccgacctacctctatgtgcagttacggcacaaagagaaaa
ttatccactgcgctggctttgataggaaaaccttccattcttctgctggatgagccaagc
tcagggatggatcctaagtcaaaacggcatctctggaagatcatttcagaagaagtgcag
agcaaatgttctgtcatcctgacatctcacagcatggaagaatgtgaagctctctgtacc
aggctggccattatggtgaatggaagattccaatgtattggatctttacagcacataaag
agcaggtttggacgtggatttactgtcaaagttcacttgaagaatgacaaagtaagcatg
gagaccctcacaaggttcatgcagctgcactttccaaaaacatacttaaaagatcagcac
cttagcatgctagagtatcatgtaccagtgacagcaggaggagtagcaaacatttttgat
ctgctggaaaccaacaagactgctttaaatattactaatttcctagtgagtcagaccact
ttggaagaggttttcatcaactttgccaaagaccaaaagtcctatgaaactactgacacc
agcagccaaggttctaccaccagtgttgactcacaggatgaccagttatag
DBGET
integrated database retrieval system
