Oryctolagus cuniculus (rabbit): 100341419
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Entry
100341419 CDS
T03373
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100341419
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100341419
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100341419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100341419
NCBI-ProteinID:
XP_008255265
Ensembl:
ENSOCUG00000004982
LinkDB
All DBs
Position
4:92154683..92174279
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AA seq
650 aa
AA seq
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MRGGGFGDRDRDRDRGGFGARGGGGLPLKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRAETDRAGYANGSGY
GSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGAGTYGASSTTTTGRSSQSSSQQF
SGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtggcggcttcggggaccgggaccgggatcgtgaccgtggagggtttggagca
agaggtggtggtggccttcccctgaagaaatttggtaatcctggggagcgtttacgtaag
aagaaatgggatttgagtgagcttcccaagtttgagaagaatttttatgtggaacatcca
gaagtagcaaggctgactccatatgaggttgatgagctacgccggaagaaagagatcaca
gtgagagggggagatgtttgtcctaaacctgtgtttgccttccatcatgccaacttccca
cagtatgtaatggatgtgttgatggatcagcacttcacagaaccaacaccaattcagtgc
cagggatttccattggctcttagtggtcgggatatggtgggcattgctcaaactggatct
gggaagacattggcgtatttgctgcctgcaattgttcatattaaccaccagccatacttg
gaaaggggagatggcccaatttgtctagtgctggctcctaccagagagctcgcccagcaa
gtgcagcaggtggctgacgactacggcaaatgctccagattgaagagcacctgcatctac
ggcggcgctcccaaagggcctcagattcgggacttggagcgaggtgttgagatctgcata
gctactcctggacgcctaatagatttcctggagtcgggaaagacaaatcttcgtcggtgt
acttaccttgtactggatgaggctgacagaatgcttgatatgggctttgagccccagatc
cgtaaaattgttgaccaaatcaggcctgataggcagactttgatgtggagtgcaacctgg
ccgaaagaagtccggcagctcgcggaggacttcctgcgtgattacacccagatcaacgtg
ggcaatctggagctgagcgccaaccacaacatcctccagattgtggatgtctgcatggag
agcgaaaaggaccacaaattgatccagctgatggaggaaatcatggctgaaaaggaaaac
aaaacaatcatatttgtggagacaaagagacgctgtgatgacctcactcggaggatgcgc
agagatgggtggccagctatgtgtatccatggggacaagagtcaaccagaaagagactgg
gttcttaatgagttccgttctggaaaggctcccatcctcattgccacagatgtagcctcc
cgtgggctagatgtggaagatgtcaagtttgtgatcaactatgactatccaaacagctca
gaggactatgtgcaccgtattggccgaacggctcgtagcaccaacaagggcactgcgtat
accttcttcaccccagggaacctgaagcaggccagagagctgatcaaggtgctggaggag
gccaatcaggccatcaaccccaagctgatgcagctggtggaccacagaggcggcggcggc
ggagggggaggccgttctcggtaccggaccacttcctcagccaacaatcccaacctgatg
tatcaggatgagtgtgaccggcggcttcgaggagtcaaggatggtggccggagagactct
gcaagctatcgagatcgtgctgaaaccgatagagccggttatgctaatggcagtggctat
ggaagtccaaattccgcctttggagctcaagcaggccaatacacctatggtcaaggcacc
tatggggcagctgcttatggcaccagtggctatacggcccaggaatacggtgctggcact
tacggagccagtagcaccaccacaactgggagaagttcacagagctctagccagcagttt
agtgggataggccggtctgggcagcagccacagccactgatgtcacaacagtttgcacag
cctccaggagctaccaatatgataggttacatggggcagactgcctaccagtacccgccc
ccccctccgcccccgcctccttcacgtaaatga
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