Oryctolagus cuniculus (rabbit): 100341427
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Entry
100341427 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100341427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100341427
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100341427
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
HECT type E3
100341427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
100341427
NCBI-ProteinID:
XP_051705005
Ensembl:
ENSOCUG00000016726
LinkDB
All DBs
Position
7:1781575..1931596
Genome browser
AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTTELSRGHLSKRSCSSSSAVIVPQPEDPERANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPKALQHTESPSETKKPHSKSKKRHLDQEQQLKSAQLPSTSKAHTRKS
GATGSSRSQKRKRTESSCVKSASGSESTGAEERSAKPTKLASKSAASAKAGCSTITDSSS
AASTSSSSSAVASVSSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAETRRQEKMADPESNQEAVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSESKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLSDIFSVYFRREGVMHQVKHLAESEALLTSPP
KVCTNGSGSLGSTTSVSSATATAATNATADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEP
ARTAGVSGLARAAAKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREI
RLKRFLHVFFSSPLPGEEPIGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
TGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDEGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVSNPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDG
FESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMRDKLLTAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgacgcggtaggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactactactgagctgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaggatccagagagagccaatacttcagaaaggcag
aaaacggggcaagtgcctaagaaagacaattctcgaggagtgaaacgcagcgctagtcca
gactacaacaggaccaattctcctagctctgcgaaaaaacccaaagcacttcagcatact
gaatctccatcagaaacgaagaagccacatagtaagtcaaagaagagacatttagaccag
gagcaacagctgaaatctgcacaattgccgtcaacaagcaaggctcacaccagaaagagt
ggggccactggtagttcacggagtcagaaaagaaagaggacagaaagttcttgtgtaaag
agtgcttctgggtccgaatcaactggtgccgaagagagatctgcaaaacctaccaagctg
gcttcaaaatcagccgcctcagccaaagctgggtgtagcaccatcaccgattcttcttct
gctgcctctacttcctcctcatcttctgctgttgcctccgtctcctccactgtaccacca
ggagccagggtgaaacaaggaaaagaccagaacaaggccaggcgttcccgttcagcatcc
agtcccagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgtttcagcccgaaagttagccttcctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaaggaaatctaccaagaaacgcagtgagtccccacctgccgagctcccc
agtttgaggaggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaaaagaggagcagctgagactcgtcgacaggaaaaaatggcagat
cctgaaagcaaccaggaggcagtaaattcttcagctgcacggacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggggctgttggcatgaccacttctggggagagt
gaatcagatgattccgagatgggacgattgcaagctctgttagaggccaggggtcttcct
cctcacctgtttggtcctcttggtcctcggatgtcacaacttttccatagaacaattgga
agcggagctagttctaaggcccagcagcttctacaaggactgcaagccagtgatgaaagt
cagcagctgcaggcagttattgaaatgtgtcagttgttggtcatgggcaatgaggagaca
ctgggagggtttcctgtcaagagtgttgttccagctttgataacgttactacagatggaa
cataatttcgatattatgaaccatgcttgtcgagccttaacatacatgatggaagcactt
cctcgatcgtctgctgttgtggtagatgctattcctgtcttcttagaaaagctgcaagtt
attcagtgtatcgatgtggcagagcaggccttgactgccttggaaatgttgtcacggaga
cacagtaaagccattctacaggcgggtggtttggcagactgcttgctgtatctagaattc
ttcagcatcaatgcccaaagaaatgcactagcaattgcggccaactgctgccaaagtatc
acaccagatgaatttcattttgtggcagattccctcccgttgcttacccaaaggctaact
catcaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgtcttgtggacaac
ttccaacatgaggagaatttactccagcaggttgcttccaaagatctgcttacaaatgtt
caacagctgttggtagtgactccacccattttgagttctgggatgtttataatggtggtt
cgaatgttttctctgatgtgctctaactgtccaacattagctgttcaacttatgaagcag
aacattgcagaaacgcttcacttcctcttgtgtggtgcctccaatggaagttgtcaggag
cagattgatcttgttccacggagtcctcaagaactatatgaactgacatctctgatttgt
gaacttatgccgtgtttaccaaaagaaggcatttttgcagttgataccatgttgaagaaa
ggaaatgcacagaacacagatggtgcgatatggcagtggcgtgatgaccggggcctgtgg
catccctataacaggattgacagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaggacacgggaacagcacgtgccattcaaagaaaacctaaccccttagcc
aatactaacactagtggacattcagagtcaaagaaggacgatgctcgagcacagcttatg
aaagaggatccggagctggctaaatctttcattaagacgttgtttggtgttctttatgaa
gtgtatagttcctcagcaggacctgcggtcagacataagtgccttagagcaattcttaga
ataatttattttgcggatgccgaacttctgaaggatgttctgaaaaatcatgctgtttca
agtcatattgcttccatgctatcaagccaagacctgaagatagtagtcggagcacttcag
atggcagaaatcttaatgcagaagttatctgatatttttagtgtttacttcagaagagaa
ggtgtaatgcaccaggtaaaacacctagcggaatccgaggctttgttgacaagtccacca
aaggtgtgtacgaatggatcaggatccttggggtccacaacgtcggtcagcagtgcaaca
gctacagctgccactaatgccacggctgacttgggatcacccagcctgcagcacagcaga
gatgactctctagatctgagccctcaaggtcgattaagtgatgtcctaaagaggaaacga
ctgccaaaacgaggaccacgaaggccaaagtactcccctccaagagatgacgacaaagta
gacaatcaagctaaaagccccaccactactcagtcacctaaatcttctttcctggcaagc
ttgaatccaaaaacatggggaaggctcagcgcacagtccaacagcaacaatatcgagcca
gcgcggactgcaggagttagtggtcttgccagggctgctgcaaaggacactatatccaat
aatagggaaaagattaaaggttggattaaggaacaggcccataaatttgtagaacgttac
ttcagttctgagaacatggatgggagcaaccctgccctgaatgtcctccagagactttgt
gctgcaactgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatt
cgtagcatagtctcggaatcagatgtttcatcatttgaaatccaacatagtggattcgtg
aagcagcttttactttacttgacatctaaaagtgaaaaagatgctgtgagcagagagatc
agattaaagagatttcttcatgtatttttttcttctccacttcctggagaagagccaatt
ggaagagtagaaccagtgggaaatgcacctttgttggcgttagttcacaaaatgaacaac
tgcctcagccagatggaacagtttccagtcaaagtacatgatttccctagtggaaatggg
acgggaggcagcttttctctcaacagaggatcacaggctttaaaattcttcaacacacat
cagttaaaatgccagttgcagagacatcctgactgtgcaaatgtgaagcagtggaaaggt
ggacctgtcaagattgaccccctggctttggtacaggctattgagagataccttgtggtc
agagggtatggaagagtgagagaagatgatgaagacagtgacgacgaggggtcagatgag
gagatagacgagtctctggctgctcagttcttaaattcaggaaatgtaagacacaggcta
cagttttacattggagaacatttgctaccatataacatgactgtgtatcaggcagtccgg
cagttcagtatacaggcggaagatgaaagagaatccacggatgatgagagcaatccccta
gggagagctggtatttggacaaagactcatacaatatggtacaaacctgtgagagaggat
gaagaaagtaataaagattgtgttggtggtaaaagaggaagagcccaaacagctccaaca
aaaacttcccctagaaatgcaaaaaagcatgatgagttatggcatgatggagtgtgtcca
tcagtatcaaaccctttagaagtttacctcattcccacaccacctgaaaatataacgttt
gaagacccgtcattagatgtgatccttcttttacgagttttacatgccatcagtcgatat
tggtattacttgtatgataatgcaatgtgcaaggagattattccaactagtgaatttatt
aacagtaaattgacagcaaaagcaaataggcagcttcaagatcctttagtaatcatgaca
ggaaatatccctacatggcttactgagctaggaaaaacttgcccatttttctttcctttt
gatactcggcaaatgcttttttatgtaactgcatttgatcgggaccgagcaatgcaaaga
ttacttgataccaacccagaaatcaaccagtctgattctcaagacagcagagttgcacct
agattggacagaaaaaaacgcactgtgaacagagaggagctgctgaaacaagccgagtct
gtgatgcaggacctgggcagttcccgggccatgttagagatccagtatgaaaatgaggtt
ggtacaggtcttggacctacgctggagttctatgcacttgtatctcaggagctgcagaga
gctgatctgggtctctggagaggtgaagaagtaactctgagcaatccgaaaggaagccaa
gaagggaccaagtacattcaaaatctccagggcctgtttgcacttccctttggtaggaca
gctaagccagctcatattgcaaaggttaagatgaagtttcgattcttaggaaaattaatg
gccaaggctatcatggatttcagattggtggaccttcctcttggtttacctttctataag
tggatgctacggcaggaaacttcattgacgtcacatgacttgtttgacattgacccagtt
gtagccagatcagtgtatcacctagaagacatcgtcagacagaagaaaagacttgaacaa
gataaatcccagaccaaagagagtctacagtatgcattagagaccctgaccatgaatggt
tgctcagtggaagatctaggattggatttcactctgcctgggtttcccaacattgagctg
aagaaaggagggaaggatatacccgtcacgatccacaatttagaggagtatctgagactg
gttatattctgggcactgaatgaaggtgtttctaggcaatttgattccttccgggatgga
tttgaatcagttttcccactcagtcatcttcagtacttctacccagaggaactggatcaa
ctgctatgtggcagtaaagcagacacgtgggatgcaaagacgttgatggagtgctgcagg
cctgatcacggttatactcacgacagtcgggctgtgaagttcctgtttgagattctcagt
agttttgataatgagcagcagaggttatttctccagtttgtgaccgggagcccaagattg
cctgttggaggattccggagtctgaatccacctttgacaattgtccggaagacattcgag
tcaacagaaaacccagatgacttcttaccctctgtgatgacctgtgtgaactatctcaaa
ctgccggactattcgagcattgagataatgcgagacaaactgctgacagcagcacgagaa
gggcagcagtcattccatctctcctga
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integrated database retrieval system
