Oryctolagus cuniculus (rabbit): 100341471
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Entry
100341471 CDS
T03373
Name
(RefSeq) THO complex subunit 5 homolog isoform X2
KO
K13174
THO complex subunit 5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100341471
09122 Translation
03013 Nucleocytoplasmic transport
100341471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100341471
03041 Spliceosome [BR:
ocu03041
]
100341471
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100341471
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100341471
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
100341471
NCBI-ProteinID:
XP_008272899
Ensembl:
ENSOCUG00000004109
UniProt:
A0A5F9CDJ0
LinkDB
All DBs
Position
21:complement(2693548..2739177)
Genome browser
AA seq
689 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGSQTEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKEVAVEIEERRIKSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKADVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSSQPPRQDKTLSV
AIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSV
MLDVKCKDDSVLHLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGD
HGKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVVADHSLS
ASHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIPHE
DYMELHFTKDIVEAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKG
EKTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEG
PKEFPQEKMCLRLFRKSSLPLGCIASSIK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcaagtaagaaacggaaacccaaagtcatccgaagcgacggatcccaa
actgaagggaagcggaaccgctcagacaccgagcaggaaggaaaatactacagcgaggag
gcggaggtggacctgcgggaccctggcagagactatgagctgtacaagtacacatgccag
gagctgcagaggcttatggctgagatccaggacctgaagagcaggggcggcaaggaagtg
gcagttgaaattgaagaacggaggatcaagagctgtgtgcatttcatgacgctaaagaag
cttaaccgattagcccacatcaggttgaagaaaggaagagaccagacccacgaggctaag
cagaaagtagacgcctatcacctgcagctacagaacctgttgtatgaggtgatgcacctg
cagaaggagatcaccaagtgtctggagtttaagtcaaagcatgaagaaattgatctggtc
agtttggaagagttttataaggaggctccgccagatatcagcaaggctgacgtcaccatg
ggagaccctcaccagcagactctggcgcgtctggactgggagctggagcagcggaagagg
ctggcagagaagtaccgagagtgcctgtccaacaaggagaagattctcaaggagatagag
gtgaagaaggaatacctgagcagcctacagcctcgcctcaacagcatcatgcaggcttcc
ctcccagtgcaggagtacctgttcatgccgttcgaccaggctcacaagcagtatgagaca
gctaggcacctgccgcctccactctacgtgctctttgttcaggccactgcctacgggcag
gcctgtgctcatatgaaatcctcctcccagccccctagacaggataagacgttgtctgtg
gcgatcgaaggcagtgtggatgaagccaaggctctgttcaagcctcctgaggactctcaa
gatgacgagagcgactctgatgccgaggaggagcagaccacgaaacgccggcggcccacg
ctgggggttcagttggacgacaagcgcaaggagatgctgaagcggcacccgctgtctgtc
atgctggacgtaaagtgtaaagatgacagtgtgcttcacctgaccttctactacctcatg
aacctcaacatcatgacagtgaaagccaaagtgacaaccgccacggagctgatcactccc
atcagtgcaggggacttgctatctcctgactcagtcctgagctgtttgtatcccggggat
catgggaagaaaactccgaatccagccaatcagtatcagtttgataaagttggcatcctg
actttgagagactatgtactcgacctgggtcacccttatttgtgggtacagaagctgggt
ggcctccacttccccaaagagcagccccagcacactgtggttgctgaccactcgctgagc
gctagccacatggagaccaccatgaagctgctgaagaccagggtgcagtcccgcctggcc
ctccacaaacagtttgcatccctggagcatggcattgtaccagttaccagtgattgccag
tacctcttccctgccaaggttgtctctcgcctggtgaagtgggtgacgattccccatgag
gattatatggagctccatttcaccaaagacattgtggaggcgggactggcaggagacacc
aatctctactatatggcgctcatcgaaaggggcacagccaaactgcaggctgctgtggtg
ctgaaccctggctactcctccatcccacctgttttccagctctgtctgaactggaagggg
gagaagacaaacagcaacgatgacaacattcgggccatggagagcgaggtcaacgtgtgc
tacaaggagctgtgcggcccccggcccagtcaccagctcttgaccaatcagctgcagcgg
ctgtgcgtgctgctggacgtctacctggagaccgagagccacgatgacagtgtggagggg
cccaaggagtttccccaggagaagatgtgtctgcggcttttcaggaagtcttctctaccc
ctggggtgcatcgcatcaagtatcaagtag
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integrated database retrieval system
