Oryctolagus cuniculus (rabbit): 100341484
Help
Entry
100341484 CDS
T03373
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04517
IgSF CAM signaling
ocu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100341484
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100341484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100341484
NCBI-ProteinID:
XP_051701608
Ensembl:
ENSOCUG00000004401
LinkDB
All DBs
Position
1:54855824..55040572
Genome browser
AA seq
2125 aa
AA seq
DB search
MLETIDKNRALQAAERLQAKLRERGDVANEDKLSLLKSVLQSPLFSQILNLQTSMQQLKD
QVNIATCTTSDVEYAHIPHLSPAVIPTLQSESFLLSPSNGNLEALTASGAPHINGKPACD
EFDQLIKNMAQGRHVEVFELLKPPCGGLGFSVVGLRSENRGELGIFVQEVQEGSVAHRDG
RLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIARGSLPPLISPIVSRSPSAA
STISAHSNPVHWQHVETIELVNDGSGLGFGIIGGKATGVIVKTILPGGVADQHGRLCSGD
HILKIGDTDLAGMSSEQVAQVLRQCGNRVKLMIARGAVEESAAPSSLGITFSSSPSSTPE
MRVDASTQKSEENETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDG
RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVRLTLMRRGTKQEAELTSRDHNTKDA
DLSLVNANMSKENYEKDEDSSSLRRNTSILPIEEEGSALLSAEIEEQEDAQQEEAALLTK
WQRIMGINYEIVVAHVSKFSENSGLGISLEATVGHHFIRSVLPEGPVGHSGKLFSGDELL
EVNGITLLGENHQDVVNILKELPIEVTMVCCRRTVPPTTESELSSLDLCDIELTEKPHVD
LGEFIGSSETEEPVLPVTDVVQNTEAVQAPLAMWEAGIQHIELEKGSKGLGFSILDYQDP
VDPTSTVIVIRSLVPGGVAEKDGRLLPGDRLMFVNDVNLESSSLEEAVEALKGAPSGTVR
IGVAKPLPLSPEEGYVSAKEDSFLYPPHSCEDEGLTDKALFRADLALVDTNDADLADEST
FESQYSPDKDSVYSPQASLLSLHGSAGSDGMNYGSSLPSSPPKEVTEHSSDPVLDLHMSL
EELYTQNLLQRKDENPPSVDLSMGPASGFTINDYTPANAIEQQYKCENTIAWTETHLPSE
VIARTELTSPVLLDSTGKGSEYLTEQNSLVSNSECVMLQNLSKESFVKTITAAKGNSSLG
MTVSANKDGLGMIVRSIIHGGAISRDGRIAVGDCILSINEESTISLTNAQARAMLRRHSL
IGPDIKFSAAPADYRAPFYVITYVPAEHLEEFRMSLGQQSGGIMSLDALPSYTVRDMPEL
PEREEGEGEESELQNAAYSNWNQPKRSKDNHHDGICHSIISVAQVELWREPSKSLGISIV
GGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLRPGDRIVEVDGMDLRDASHEQAVEA
IRKAGNPVVFMVQSIINRPRKAPLPSVPHNLYPKYSFSSTNPFADSLQFNAYKELQSSSR
VFFHCSPTNPFAPTPFKAPSQSEAEEEKAPLCDVPAPTPSGLAEMGSDLTQSASKTSEDA
DKEDEFGYSWKNIRERYGTLTGELHVIELEKGRSGLGLSLAGNKDRSRMSVFIVGIDPNG
AAGKDGRLQIADELLEINGQILYGRSHQNASSIIKCAPSKVKIIFIRNKDAVSQMAVCPG
HTGEPLASTSESLQSKEMESGVTMSEVAVGLSSFKNVQHLELPKDQGGLGIAISEEDTIS
GVIIKSLTEHGVAAKDGRLKVGDQILAVDDEVVVGCPVEKFISLLKTAKTTVKLTICAKN
PDSPATSVAGAANGGKRSSSQSPVVPQSSSPEPEPIRSTSRSSTPAIFASDPATCPIIPG
CETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDL
RKATHDEAINVLRQTPQRVRLTLYRDEAPYKEEDVCDALTVELQKKPGKGLGLSIVGKRN
DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGR
IKAGPFHSERRPSQSSQVSEGSLSSFTLPISGTSTSESLESSSKKNALASEIQGLRTVEI
KKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPNGVAAQTQKLRVGDRIVTICGTSTEGMT
HTQAVNLLKSASGSIEMQVVAGGDVSVVTGHQQEPANSALPFTGLTSSSIFQDDLGPPQC
KSITLDRGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSL
EGVTHEEAVAILKRTKGTVTLMVLS
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaaccatagacaaaaatcgagccctgcaggcagcagagcgcctgcaagctaag
ctgcgggaacgtggggatgtagcaaacgaagacaagctgagcctcctgaagtcagtcctg
cagagcccactcttcagccagattctgaacctccagacttccatgcaacagctcaaagac
caggtaaacattgcaacttgtacaacttcagatgttgaatatgctcacattcctcatctt
agtccagctgtaattcctactctgcaaagtgaatcatttttattatccccaagtaatggg
aatctggaagcacttacagcatctggtgctccacacattaatggaaagccagcttgtgat
gaatttgatcagctgattaaaaatatggcccagggtcgccatgtagaagtttttgagctc
ctcaaacctccgtgtggaggccttgggtttagtgttgtgggactaaggagtgaaaacagg
ggtgagctgggaatatttgtacaagaagttcaggagggcagtgtggctcacagagatgga
agattgaaggagacagatcagatccttgctatcaatgggcaggcacttgaccagacaatt
actcatcagcaggctatcagcatcctccagaaagccaaagatactgtccagctggttatt
gccagaggctccttgcctccacttatcagccccatagtttcccgttctccatctgcagcc
agtacaatttcagctcactctaatccggttcactggcagcatgtggaaactattgaactg
gtgaatgacggatctggtctgggatttggcatcataggaggaaaagcaactggtgtgata
gtaaaaaccattttgcctggaggagtagctgatcagcatgggcgattatgcagtggagac
cacattctaaagattggtgacacagacctggcaggaatgagcagtgagcaggtagcacaa
gtcctcaggcaatgtggaaacagagttaagttgatgattgcaagaggtgctgtggaagaa
tctgctgcaccctcctctttgggcattaccttctcctcctccccttcttctacaccagag
atgcgggttgatgcctctactcagaaaagtgaagaaaatgagacatttgatgtagaactc
acgaaaaatgtccagggattaggaattaccattgctggttacattggagataaaaaatta
gaaccttcaggaatctttgtaaagagcattaccaaaagcagtgctgttgaacatgatgga
agaatccaaattggagatcaaattatagcagtagatggcacaaaccttcagggttttacc
aatcaacaagcagtagaggtgctgcgacacacagggcaaactgtgcgcctgacactaatg
aggagagggacaaagcaggaagctgagctcacgtcaagggaccacaacacaaaagatgcg
gatttatctcttgttaatgccaacatgagcaaagaaaattatgaaaaagatgaagattct
tcatctttgaggagaaataccagcatattaccaattgaagaagaagggtctgcattactg
tcagccgagatagaagaacaagaagatgcacagcaagaagaagctgctctgctcacaaag
tggcagcggattatgggaatcaactatgaaatagtggtggcccatgtgagcaagtttagt
gagaacagtgggctggggataagtctggaagcaacagtggggcatcatttcatccgatct
gttctaccagagggtcctgtcggacacagtgggaagctcttcagtggagatgagctgttg
gaagtgaatggcatcactttgcttggagaaaatcaccaagatgtggtcaatattttaaaa
gaactgcctatagaagtgacaatggtgtgctgtcgccgaactgtgccacccacaacagaa
tcagaactgagtagcctggacttatgtgatattgagctaacagaaaagcctcatgtagat
ctaggagagttcatcgggtcctcagaaacagaggagccagtgctgccggtgacggatgtg
gttcagaatactgaggcggttcaagcacctttggccatgtgggaggctggcattcagcac
atcgagctggaaaaagggagcaaaggacttggttttagcattttagattaccaggatcca
gttgatccaacaagcactgtgattgtcattcgttctttggtacctggtggagttgctgaa
aaggatggtcgccttcttcctggagatcgcctcatgtttgtcaatgatgtgaacttggaa
agcagcagtcttgaagaagctgtagaggcgctgaagggagcaccctcaggaactgtgaga
ataggagttgctaagcctttacctctttcaccagaagaaggttatgtctctgcgaaggag
gattcctttctctacccaccacactcctgtgaggatgaagggctgactgacaaagccctc
ttcagggctgacttggctctggtggacacaaatgatgctgacctggcggatgagtccaca
tttgaatctcagtactctcctgataaggacagtgtctactctcctcaagcctctctttta
tctcttcatggcagtgctggtagtgatggtatgaactacggttcctcccttccatcatcg
cctcccaaggaagttactgagcattcttccgatccagttcttgatctgcatatgtccttg
gaggaactctatacccaaaatctgctgcaaagaaaggatgagaatccaccttcagtggac
ttgagcatggggcctgcttctgggtttaccataaacgattatacacctgcgaatgctatt
gaacagcaatacaaatgtgaaaacacaatagcatggactgagactcacttaccaagtgag
gttatagcccgtacagaacttacctcacctgtgctacttgattcaactggaaagggctct
gagtacttgactgaacagaactccctggtttctaattctgaatgtgtcatgctccaaaac
ctatccaaagaatcttttgtgaaaactattactgcagcaaaaggcaattctagcctaggg
atgacagtaagtgctaataaagatggattggggatgatagttcggagcattattcatggt
ggtgccattagtcgagatggcaggattgcagttggggactgtatcttgtccattaatgaa
gaatctaccatcagcttaaccaatgctcaggcacgagccatgctgagaagacattctctc
attgggcctgacataaaattttctgcagcacctgctgactatcgagcccccttttatgta
attacgtatgtgcctgcagaacatctggaagagttcagaatgagcttgggacaacaatct
ggaggaataatgtccctagatgcgttgccttcatacactgtcagagacatgccagaacta
ccagagcgagaagaaggagaaggagaagaaagcgaacttcagaatgcagcgtacagcaat
tggaatcagcccaagcgatctaaagataaccatcatgatggaatctgtcattcaataata
tctgttgcacaggttgaactttggagagaaccaagcaaatccttgggcatcagcattgtt
ggtggacgagggatggggagtcgtctaagcaacggtgaagtgatgaggggcattttcatc
aaacatgttcttgaagatagtccagctggcaaaaatggaaccttgagacctggagacaga
atagtagaggtggatggaatggacctcagagatgcaagccatgaacaagctgtggaagcc
attcggaaagcaggcaaccctgtagtctttatggtacagagcattattaacagaccaagg
aaagcccccttgccttctgtgccgcacaacctttaccctaagtacagcttcagcagcact
aacccatttgctgactccctccagttcaacgcctacaaggaattacagagttcaagtaga
gttttcttccattgttccccaactaacccctttgctcccacaccatttaaggcacccagt
cagtcagaggcagaggaagagaaggctcctctgtgtgatgtgcccgcacccactccttca
ggattggcagaaatgggcagtgatctcacacagtctgcaagtaaaacctcagaagatgcg
gataaagaggatgagtttgggtacagctggaaaaatatcagagagcgttacggaacacta
acaggagagctccatgtgattgaactggagaaaggtcgtagcggtttgggtctcagtctt
gctggaaacaaagaccgatccagaatgagtgtctttatcgtggggattgatccaaacgga
gcagcagggaaagatggtagattgcagattgccgatgagcttctagagatcaatggtcaa
attttatatggaagaagtcatcagaatgcttcatcaatcattaaatgtgccccttctaaa
gtaaaaataatttttatcaggaataaagatgcagtgagtcagatggctgtatgtcctgga
catacaggagaaccattggcttctacctcagagagccttcaaagtaaggagatggagtct
ggtgttactatgtctgaggtagctgtgggcctcagttcatttaaaaatgtgcaacatctg
gagcttcccaaggatcaaggaggtttgggcattgctatcagtgaagaagatacaatcagt
ggagtcatcataaagagtttaacagagcatggagtggcagccaaggatggacgactcaaa
gttggagatcagatcttggctgtagatgatgaagttgttgttggctgtccagttgaaaag
tttattagccttctgaagacagcaaagacgacagtaaaacttaccatttgtgccaagaat
ccagactcgccggctacttcagtagctggtgcagccaacggaggaaaaaggagcagctct
cagtctccagtggtgccacagtcgagctctccagaaccagagcccattcgaagtacaagc
aggtcatcaacaccagcgatctttgcttctgatcctgccacctgccccattatccctggc
tgtgaaacaacaattgagatttccaaagggcgaacaggactgggcctgagcattgtgggc
gggtcagacacactgctgggtgccattatcatccatgaagtatatgaagaaggagcggca
tgcaaagatggaagactctgggctggagaccagatattagaggtgaatgggattgaccta
agaaaggccacacatgatgaagccatcaatgtcctgcgacagacgccccaaagagtgcgc
ctgacactctacagagacgaggccccctacaaggaggaggacgtgtgtgatgccctcacc
gtggagctacagaagaaacccggcaaaggcctgggactaagtattgttgggaaaaggaat
gatactggagtgtttgtgtcagacattgtcaaaggaggaattgcagacgcagatggaaga
ctgatgcagggagaccagatattaatggtgaatggagaagatgtccgtaatgccacccag
gaagctgtagctgccttgctgaagtgttccttaggcacagtcaccttggaagttggaaga
atcaaagctggcccatttcattcagagaggagaccttcacaaagcagccaggtaagtgaa
ggcagcttgtcctctttcactttgccaatttctggaacaagtacatctgagtcactggaa
agcagctcaaagaagaatgcattagcatctgaaatacagggattaagaacagttgaaata
aaaaagggacctactgactctctgggaatcagcattgctgggggagtgggcagccctctg
ggtgatgttcctatatttattgccatgatgcacccaaatggagtagcagctcagacacag
aaactcagagttggggataggattgtgacgatctgtggcacatccacggaggggatgact
cacacccaagcagtcaacttactgaaaagtgcttctggctccattgaaatgcaggtggtt
gctggaggagatgtgagtgtggtcacagggcatcagcaggagcctgccaattctgctctt
cctttcactgggcttacgtctagcagcatatttcaggatgatttaggacctccccagtgt
aagtctattactctggaccggggaccagatggcctaggcttcagtatagtaggaggctat
ggcagccctcatggagacttacccatttacgttaaaactgtgtttgcaaagggagcagcc
tccgaagatgggcgtctaaaaaggggtgatcagatcattgccgtcaacggacagagtcta
gaaggggtaacccacgaagaagctgttgccattcttaagcggacaaaaggcacagtcact
ttgatggttctctcctga
DBGET
integrated database retrieval system
