Oryctolagus cuniculus (rabbit): 100341540
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Entry
100341540 CDS
T03373
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03250
Viral life cycle - HIV-1
ocu03272
Virion - Hepatitis viruses
ocu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100341540
03272 Virion - Hepatitis viruses
100341540
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100341540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100341540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100341540
Membrane trafficking [BR:
ocu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
100341540
Exosome [BR:
ocu04147
]
Exosomal proteins
Proteins found in most exosomes
100341540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CCDC93_N
AAT
Motif
Other DBs
NCBI-GeneID:
100341540
NCBI-ProteinID:
XP_051674552
Ensembl:
ENSOCUG00000017800
LinkDB
All DBs
Position
14:21859138..21936181
Genome browser
AA seq
873 aa
AA seq
DB search
MATFISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAALGRPLDK
HEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALNREPTVDLS
PDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKY
FYFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYV
SVKDFSDKISRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVNVPISQKFTDLF
EKMVPVSVQQSLAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTVPQ
SILTKSTSVIEQGGIQTVDKLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKFKER
WQRTASNDLYKPLRAEGSNFRTVLDKAVQADGQVKERYQSHRDTIALLCKPEPELNAAIP
SANPAKTMQGSEVVNVLKSLLTNLDGVKKEREGLENDLKAVNFDMTSKFLTALAQDGVIN
EEALSVTELDRVYGGLTSKVQESLKKQEELLRSIQVSHQEFSKMKQSNNEANLREEVLKN
LAAAYDNFVELVANLKEGTKFYNELTEILLRFQNKCSDIVFARKTERDELLKDLQQSIAR
EPSAPSIPTPAYQSSPAGGHAPAAPTPAPRTMPPTKPQPPARPPPPVLPANRTPSASAPA
PVGTGTPVPAPSQTPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPYPP
VYHQSPGQAPFPGPQQPSYPFPQPPQQSYYPQQ
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcatctcggtgcagctgaagaagacgtcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacctacccgagcggcggggaggagcaggcccagtactgc
cgcgcggccgaggagctcagcaaactgcgccgcgccgcgctcggccgcccgctggacaag
cacgagggcgcgctcgagacgctgctgagatattatgatcagatttgttccattgaaccc
aaattcccattttctgaaaatcagatctgcttgacattcacctggaaggatgcttttgat
aaaggttcactttttggaggctctgtaaaattagctcttgcaagcttaggatatgaaaag
agctgtgtgttgttcaattgtgcagccttagctagccagattgcagcagaacagaacctg
gataacgatgaaggattgaaaatcgctgctaagcattaccagtttgctagtggtgccttt
ttacacattaaggagactgtgttatctgccttaaaccgagagcctactgtggacctatct
ccagatactgtcgggaccctcagtcttattatgctggcacaggctcaagaagtatttttt
ttaaaagctacaagagataaaatgaaggatgccatcatagctaagctggctaatcaggct
gcagattattttggcgatgccttcaaacagtgccagtacaaagacactctccccaagtat
ttttatttccaggaggtgttccctgtcttggctgcaaagcactgtatcatgcaggccaat
gctgaataccaccagtctatcctggcaaaacagcagaagaaatttggagaagaaatagca
aggttacagcatgcagcggaattgattaagacagtggcatctcgctatgatgaatacgtc
agtgtaaaggatttttctgacaaaatcagccgtgcccttactgcagcaaagaaggataat
gacttcatttatcatgatcgagttccagaccttaaagatctagatcccattggcaaagcc
acacttgtgaaatctacccctgtcaatgtacctatcagccagaaatttactgatctgttt
gagaagatggttcccgtgtcagttcaacagtctctggctgcctacaaccagaggaaagct
gatttggttaacagatcaatcgctcaaatgagagaagccacgactttggcaaatggggta
ttagcttcacttaatcttccagcagcaattgaagatgtatctggagatacagtacctcag
tctatattgactaagtccacatctgtgattgaacagggaggcatccagactgttgataag
ttgatcaaagaactacctgaactactacaaagaaatagagaaatcctagatgagtcatta
agactactggatgaagaagaagcaacagacaatgacttaagagcaaaattcaaggaacgc
tggcaaaggacagcatccaatgacctctataagcctttgagagcagagggaagcaacttc
agaacagttttagataaagctgtgcaagctgatggacaagtgaaagaacgttatcagtct
catcgtgacaccattgcgcttctgtgtaagccggagcccgagctgaatgctgccatccct
tctgctaacccagcaaagaccatgcagggcagcgaggttgttaatgtcttaaaatcctta
ttgacaaatctcgatggcgtaaagaaggagagagaaggccttgagaatgacctgaaagcc
gtgaattttgacatgacaagcaagtttttaacagctctggctcaagatggtgtgataaac
gaagaagctctttctgttactgaactggatcgagtctatggaggtcttacgtctaaagtg
caggagtcgctgaagaagcaggaggagcttcttagaagtattcaggtctcacaccaggaa
ttttcaaaaatgaaacagtctaacaatgaagctaacctaagagaagaagttttgaagaat
ttggctgctgcttatgacaactttgttgaactcgtagctaatttgaaggagggcaccaag
ttttacaatgagctgacggaaattctgctcaggttccagaacaaatgcagtgatatagtg
tttgcacggaagacagaaagagatgaactcttaaaggacttgcagcagagcattgcccga
gaacctagtgctccttcaatccctacgcctgcctatcagtcctctccagcagggggacac
gcgccagctgctccgaccccagccccgaggaccatgccgcctacaaagccccagccccct
gcccggcctccacctcctgtgcttccagcaaatagaactccttctgcctctgctccggct
cctgtgggaactggaaccccagtacctgctccatctcaaacccctggctcggcccctcct
ccacaggcccagggcccaccataccccacctatccaggataccctgggtattgccaaatg
cccatgcccatgggctataatccttacgcgtacggccagtataacatgccctaccctcca
gtgtaccaccagagcccgggacaggctccgttcccaggaccccagcagccttcctacccc
ttccctcagcccccacagcagtcctactatccacagcagtaa
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