Oryctolagus cuniculus (rabbit): 100341571
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Entry
100341571 CDS
T03373
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu03250
Viral life cycle - HIV-1
ocu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100341571
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100341571
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100341571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100341571
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100341571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
UL20
Motif
Other DBs
NCBI-GeneID:
100341571
NCBI-ProteinID:
XP_002720909
Ensembl:
ENSOCUG00000003064
UniProt:
G1SIZ4
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MASGAGGMGGGGGGKIRTRRCHQGPVKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
KTEDVCSCSTDTSGVPHWPENRENDHMIYANEENSNINDGRITPEPAVSTEEPSTTGTAS
NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHEDDN
ISTTSGFSSRASDKDIAVSKNTSVPPLWSPEAESSHSLSQHTATNSKKPAFNLSAFGTLS
PSLGNSSILKTSQLGDSPFYPGKTMYGGAAAAVRQSKQQNTPYQAPVRRQMKAKQLNAQS
YGVTSSTARRILQSLEKMSSPLADAKRIPSVSSPLNSPLDRSGINISDHQAKSQKVDSQY
PPVQRLMTPKPISVAANRTVYFKPSLTPSGELRKINQRIDKRHSIGREKNMTSGQSGEKQ
ESGFSYPDFSMPAANGLSSAVRGGGGKMRRERTRFVGSKPPEEEEEMELPVLPKISLPIA
SSSLPIFNFSSPVSTASSLSPINPSQSLTNKVQMTSPSSTGSPMFRFSSPIIKSTEADIL
PPTSIGFTFSVPIAKTELTGSISTSESITNSSAQDTTAVTSSTICMKRQGEDYEGPFRPA
KIMKEGSVLDLLKNPDFTSPKVDSLAAQPTTTSPVVYTRPAISSFSSSGSGFGENLKVAP
SWQCDTCLLQNKLTDNKCVACQAAKSPPRENAKQTGIGTPSKSSKATLPASGTGFGDKFK
PPVGTWDCDTCLVQNKPEATKCVACETPKPGTGVRRALTLTATSESAVTVTASSSSCTVT
TVSLGFGDRFKRPVGSWECPICCVTNNAEDNKCVSCMSEKPGSSVPASSSSTIPVPVSSG
GCLGLDKFKKPEGSWDCDVCLVQNKADSTKCVACKCAKPGTESESIGLGTSSSSSNPSGS
PFKFGISSSSSGPSQTLTNTGNFKFGDQGGFKIGVSSDSGSVNPLSEGFKFSKPVGDFKF
GVSSDSKPEEVKKDSKNDNKFKFGFSSGLSNPTSSAPFQFGVSNLGQQEKKEEPPKSSSA
NFSFATGIVNPTPATSNTLVTSENKSSFSFGSIETKSVSMTPFTCKTPEAKKEEMPAPKV
GFTFGNMEPASMPSASMFALGRTEEKQQEPVTSTSLILGKKADKEEPKCQPLFSFGNSEQ
TKDESSSKSTFSFSMAKTSEKEAEQPAKTTFAFGAQTSTTADQGTAKPVFSFLNNSSSSS
TPATSAGGGIFGSSTFSSSQPMTAFVFGQSSNPVSSPAFGNSTEPSTSQSLLFSQDSKPA
TTSSTSTAATSFVFGSGTSSNSAATSGFAFGATTTSSSAGSSFVFGTGASAPSASPAFGA
SQTPAFGQSQGASQPNPPGFGSISSTALFSAASQPAQPTFGAVSSSSQPPVFGQQPSQST
FGSGTAPNSNSVFQFGSSTANFNFTSNNPAGVFTFGANFSTPAASTQPSGSGSFPFNPSQ
ATFTVGSNGKSMFSSSGTSVSGRKIKTAVRRKK
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggggcaggaggaatgggagggggcggtggcggcaagatcaggacgcggcgc
tgccaccaggggccagtgaagccttaccagcaggggcgacaacagcaccagggcattctt
agcagggttacagaatctgttaagaatattgtgccagggtggctacaaagatacttcaac
aaaactgaagatgtatgcagctgttcaacagatacaagcggggtgccacactggccagaa
aatagagaaaatgatcatatgatatatgccaatgaggagaactctaacattaatgatggc
agaatcactcctgagccagcagtcagtacagaagaaccttcaacaactggtactgcgtca
aattatccagatgtattaacaaggccttctctccatcggagccatctgaatttctctatg
ttggaatcccctgcattacactgtcagccatccacatcctctgcattcccaattggcagt
tctggattttcccttgtgaaggaaattaaagattctacctctcagcatgaggatgataac
atctcaactaccagtggtttttcttcaagagcttctgataaagacatagctgtctcaaag
aacacttcagtgccacctctgtggtccccagaagctgaaagttctcattcactctcacag
cacactgccaccaactcaaaaaaaccagcattcaatttgtctgcttttggaacgctttcc
ccttcacttgggaattcttcaatccttaaaacaagtcagcttggagattctcctttttat
cctgggaaaacaatgtatggtggagcagcagctgccgtaagacagtctaaacaacaaaat
acaccgtatcaggcaccagtcagaagacagatgaaagctaagcaacttaatgcacaatct
tatggtgtgaccagttcaacagctcgacgaatattgcagtctttagagaagatgtcaagc
ccgctagcagatgcaaaaagaattccatctgtttcttcacctttaaattctcctcttgat
aggagtgggataaatatctcagatcatcaggctaaaagccaaaaggtggactctcagtat
cccccagtgcagagacttatgaccccaaagccaatttctgtagctgcaaatcgaactgtt
tattttaaaccatctctgaccccatctggtgaactaaggaagattaatcaaagaatagat
aaaaggcacagtattggacgtgaaaaaaacatgacatcaggacaaagtggagaaaaacag
gaaagtggcttttcatacccagattttagtatgccagcagccaatggtttatcttctgca
gtacgtggtggaggtggcaagatgaggcgagagagaacacgttttgttggttctaaacct
ccagaagaggaagaggaaatggaattaccagtgttgccgaaaatttctctacctattgcc
agttcttcactgcctatcttcaattttagttcacctgtgagcacagcatcctctctgtca
cccatcaatccttctcagtcactaacaaacaaggtacaaatgacctctcccagcagcact
ggcagtcccatgtttagattctcatctccaattataaaatctactgaggcagatatacta
cctccaacatctattggatttacatttagtgtgcctattgcaaaaacagagcttactggc
tctattagtacttccgaatcaatcacaaatagttctgctcaagataccactgcagtgacc
agcagtacaatctgtatgaagaggcaaggtgaagattatgagggtccttttagacctgca
aaaattatgaaagagggaagtgtcctagatcttctgaaaaaccctgatttcacatcacca
aaggtagattctcttgcagctcagcctaccacaacaagcccagtagtttatacaagacca
gcaataagtagcttttcttctagtggaagtggatttggtgaaaatttgaaagtagcacca
tcgtggcagtgtgatacgtgtctactacagaacaaacttactgataacaagtgtgtagcc
tgtcaagcagcaaaatcaccaccgagagagaatgctaaacagactggaattgggacacca
agcaaaagcagcaaagcaactcttcctgcatcaggaacaggctttggagacaaatttaaa
ccaccagtaggaacttgggattgtgacacatgtttggtgcagaataaacctgaagcgaca
aaatgtgtagcctgtgaaacaccaaaacctggaactggtgtgaggcgcgcccttactttg
acagctacgtcagaaagtgctgtgactgtgactgcttcatcttccagctgcactgtgacc
actgtttccttaggatttggagatagattcaaaaggcctgtagggtcttgggagtgtcca
atatgctgtgttactaataatgcagaagacaataaatgtgtgtcctgtatgtctgagaaa
ccaggaagttctgtacctgcttcaagtagcagcactatccctgtccctgtgtcttctgga
ggttgtctgggattggacaagttcaagaaacctgaggggagctgggactgtgacgtgtgc
ctagtacagaataaagcagactctaccaaatgtgtagcatgcaagtgtgcaaagccgggc
acagaatctgagtctataggccttgggacgtcctcctcatcttcgaacccatcgggctca
cccttcaaatttggtatctcatcatcctcttctggtccttctcaaactttaacaaacact
ggaaattttaaatttggagatcagggtggattcaaaataggtgtatcatctgattctggg
tctgtaaaccccttgagtgaaggttttaagttttctaaaccagtaggagattttaaattt
ggagtttcatctgattctaaacctgaagaagttaagaaagacagtaagaatgataataaa
tttaagtttggattttcttctgggttaagcaacccaacttcttcagctccttttcagttt
ggagtgtctaatcttggacagcaagaaaagaaagaggaacctccaaaatcttcatctgca
aactttagttttgctacaggtatagttaaccccactcctgccacttctaacaccttagtg
acctctgagaacaagagcagtttcagctttggaagtatagaaaccaagagtgtctccatg
actcccttcacatgtaagacaccagaagcgaagaaagaagaaatgcctgcccctaaagta
gggtttacttttggcaatatggaacctgcctctatgccatctgcctcaatgtttgctttg
ggacggacagaagagaaacaacaagagcctgtcacttctacttctctaattttggggaag
aaggctgacaaagaagagccaaagtgtcaaccattgttttcctttgggaattcagagcaa
accaaagatgagagttcttcgaagtcaacatttagtttcagtatggcaaagacatctgag
aaggaagctgaacagccagcaaaaaccacttttgcttttggagctcaaaccagtacgaca
gctgatcaaggtacagcaaaaccagtttttagtttcttgaacaattcttcgagttcaagt
acaccagctacttctgctggtggtggcatatttggtagttccaccttttcctccagtcag
cctatgactgccttcgtgtttggacagtccagcaatcccgtgagcagccctgcttttggt
aactccactgagcccagtacatctcagtctttgctgttctctcaagatagcaaaccagcg
accacatccagcacgagtaccgctgccacttcatttgtatttggttcaggcaccagcagt
aacagtgctgcaacctctggcttcgcctttggagctaccaccacgtctagctcagcagga
tcctcctttgtatttggtacaggagcttcagcaccatctgccagtccagcatttggtgct
agccagaccccagcatttggacaaagtcaaggtgccagccagcctaatcccccaggcttt
ggatctatatcttcaacagcgttgttttctgcggcttctcagcctgcacaacccactttt
ggagcagtgtcaagcagtagccagcctcctgtgtttggacaacagcctagtcagtctaca
tttggctctggaacagctcccaattctaattcggttttccaatttggcagcagcacggca
aatttcaacttcacaagcaataatccagcaggagttttcacatttggtgcaaattttagc
acacctgcagcctccacccagccgtcaggctccgggagctttccctttaacccgtctcaa
gctacatttacagtggggtcaaatgggaaaagcatgttctcgtcttctggaacttcagtt
tctggtcgcaagataaagactgctgttagacgaaagaaataa
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