Oryctolagus cuniculus (rabbit): 100341925
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Entry
100341925 CDS
T03373
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN isoform X4
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocu03032
]
100341925
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100341925
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100341925
DNA replication proteins [BR:
ocu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100341925
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
100341925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
SAM_GIDA_C
Motif
Other DBs
NCBI-GeneID:
100341925
NCBI-ProteinID:
XP_017194550
Ensembl:
ENSOCUG00000012620
LinkDB
All DBs
Position
2:complement(77014020..77151779)
Genome browser
AA seq
1398 aa
AA seq
DB search
MNEKRLETAAEQRKFPKWMSVESKRCAIEETKASTRKSVLEDDLPFLEFTGSIVYSYDSS
DCSFLSEDISMSLSDGDVVGFDMEWPPVYTKGKSSRVALIQLCVSESKCYLFHISSMSVF
PQGLKMLLENKAIKKAGIGIEGDQWKLLRDFDIKLKSFVELTDVANEKLKCAETWSLNGL
VKHLLGKQLLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYRKLEILGDAVQMFAIS
EGEEILPSDMKKQLTSISEEVMDLANQLPDTLRKLENPQRISILLKAISENVYSLRKMLF
GSTDMNTELGPSSDFNLPSSDDSTQIIEHKIDNDERRGATHYNLVTRNAEDIFGNETKQE
DGFEDGIENTSKENMERFCLMSLDITEYELQMLEQQAQEKAVSDVPNTSAEHLSPKDNEN
ENDSSYIIESDEDLELEMLKSLENLNSGMVEPMHSKCLEVERHVDLPAEEDEDENEALEE
EGDDEDHLLPEPNAKQVICLKTYFGHFSFKPVQWKVIHSVLEERRDNVVVMATGYGKSLC
FQYPPVYVGKIGVVICPLISLMEDQVLQLEMSNIPACFLGSAQSKNVLEDIKLGKYCIVY
MTPEFCSGNLDLLQQLDASIGITLIAVDEAHCISEWGHDFRSSFRSLGSLKTALPLVPIV
ALTATASSSVREDIVRCLKLSNPQITCTSFDRPNLYLEVGPKTGNILQDLKQFLVKKTSS
DWEFEGPTIIYCPSRKMTEQVTAELRKLNVACGTYHAGMSCSRRKEVHHSFMRDDIQCVI
ATIAFGMGINKADIRKVIHYGTPKEMESYYQEIGRAGRDGLQSSCHLLWAAADSNLNRHL
LMEIRDEKFRLYKLQMLTKMEKYLHSSRCRRQIILSHFEDKQLRKASLGIMGTEKCCDNC
RSRLGHSHPVDASDEDTSQDFGPQAFQLLSAVAILGQKFGIGVPILFLRGSSSQRVADKY
RSHSFFGIGKDQTESWWKAFSRLLINEGFLVEVPGSSKFVKICTLTKKGRVWLDTARGES
PQRLVLPASDLCPRTCPLPSSKTASSGSEHSASHMPIELTAEKKQYNLEKMYSYKAVDKI
SSGSNIPPKSIMLQSPGKSYSFSEPVISAQEQETQTVLYGKLVEARQKHANKMDVPPAIL
ATNKILIDMAKMRPTTVENVKRIDGVSEGKAAMLAPLLEVIKHFCQVNSVETDLFPTAKP
QEEQKESVVARNKKCSLSQSAAITYSLFQEKKMSVESIAENRILPLTAVGMHLSQAVRAG
CPLDMERAGLTLEVRKIIADVIRNPPVNSDMSKVKLIRTLVPENIDTYLIHMAIDILEND
HDSRPSGHRTVCDSSKKRCFPSAEESCSDSKRSKEETGTNTKTSTETSKRVLPKWFAKTV
SDTSKKPVAKTKKEGLFS
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaaagattggaaacagctgcagagcagcggaaatttcccaaatggatgtct
gtggagagtaaaagatgcgccatagaagaaacaaaggcatctactcgcaagagtgttttg
gaagatgacctccctttcttagaattcaccgggtccattgtgtatagttacgattccagt
gactgctctttcctatcagaagatattagcatgagtctgtctgatggtgacgtggtggga
tttgacatggaatggccaccagtgtacactaaagggaaatcaagtagagttgcactaatt
cagttgtgtgtgtcagagagcaaatgttatttgtttcacatttcttctatgtcagttttt
ccccagggattaaaaatgttgcttgaaaataaggcaattaaaaaagcaggcataggaatt
gaaggagatcagtggaaacttctccgtgactttgacatcaaattgaagagctttgtggag
ttgacagatgttgccaatgaaaagctgaaatgtgcagagacctggagcctcaatggtctg
gttaagcacctcctaggtaaacagcttctgaaagacaagtccatccgctgtagcaattgg
agtaattttcctctcactgaggaccagaaactgtacgcagccactgacgcttacgctggt
ctcatcatttatcgaaaacttgaaattttgggtgatgctgtgcaaatgtttgctataagt
gaaggggaagaaatcctacctagtgatatgaagaaacagttgacttcgatctctgaggag
gtgatggatctggccaaccagcttcctgacactttgagaaaattggaaaatccacagagg
atttctatactattgaaggctatttcagaaaatgtatattcactgaggaagatgctgttt
ggttcaactgacatgaacacagagctggggcccagcagtgattttaacttaccgtcatcg
gatgactcaactcaaattatagaacataaaattgataacgatgagagaaggggcgcaaca
cattataatttagttacacgcaatgcagaagatatatttggaaatgaaacaaaacaagag
gatggatttgaagatggaatagaaaatacatcaaaagagaatatggaaagattttgtttg
atgtcgttagatattacagaatatgaactccaaatgttggaacagcaggctcaggaaaaa
gctgttagcgatgttcctaacacatctgctgagcatctatctcctaaggataatgaaaat
gaaaatgattcatcttatataattgaaagtgatgaagatttagaattggagatgcttaag
tctttagaaaacctaaacagtggcatggtagaaccaatgcattctaaatgcttagaagtg
gaaagacacgtggatcttcctgctgaagaagatgaagatgaaaatgaagctcttgaagag
gaaggtgatgatgaggatcatttgttgccagaacccaatgcaaagcaagttatttgcctc
aagacatattttggccattttagtttcaaaccagttcagtggaaagtgattcattctgta
ttggaagaaagacgagataatgttgttgtcatggcaaccggatacggaaagagtttatgt
ttccagtatccgcctgtttacgtaggcaagattggcgttgtcatctgtcctcttatttct
ctgatggaagaccaagtgctgcagctggaaatgtccaacattccagcttgtttccttgga
tcagcacagtcaaaaaacgttctagaggatattaaattaggcaaatactgtattgtgtac
atgactccagaattctgttcaggtaacttggatctactccagcaacttgatgctagcatt
ggtatcacactcattgcagtggatgaggcccattgtatttctgagtgggggcatgacttt
agaagttcattcaggagcttgggctccctaaagacagcactcccactggttccaattgtt
gcacttactgccactgcaagttcttcagtgcgggaagacattgttcgttgcctgaagctg
agcaatcctcagattacctgcacgagctttgatcgaccaaacctgtatttagaagttggg
ccaaaaacagggaatatccttcaggacctaaagcaatttctcgtcaaaaagacaagttct
gactgggaatttgaaggtccaaccatcatctattgtccttcccggaagatgacagaacaa
gttacagctgaacttcgtaaactgaatgtggcctgtggaacgtaccatgcaggcatgagc
tgtagcaggaggaaggaggttcatcatagtttcatgagagacgacattcagtgtgtcata
gctaccattgcttttggaatgggcattaataaggctgatattcgcaaagtcattcattat
ggtactcccaaggaaatggaatcctattaccaggaaattggtagagctggccgtgatgga
cttcagagttcttgtcacctactgtgggctgcagcagattctaacttgaataggcaccta
cttatggagatacgtgatgagaagtttcgattatataaattacagatgttgacaaagatg
gaaaaatatcttcattccagcagatgtcggcggcagatcatcttgtctcattttgaggac
aaacaactgcgaaaagcctcgttgggtataatgggaactgaaaaatgctgtgataattgc
aggtccagactgggtcattctcatcctgttgatgcttcggatgaggacacgtcacaggac
ttcggcccacaagcattccagctgctgtctgctgtggccatcctggggcagaagtttgga
attggggttccaattttatttctccgaggatctagttctcagcgtgtggcagataaatat
cgcagtcacagtttctttggtatcggcaaggatcaaacagagagttggtggaaggccttt
tcccgtctgcttatcaatgagggattcttggtagaagttcctgggtctagcaaatttgta
aagatttgcacccttacaaaaaagggtagagtttggcttgatacagcccgtggggagtct
cctcagagacttgtccttcctgctagtgacctgtgtccaaggacgtgtcccctgccaagt
tctaaaactgcgtcttcaggcagtgaacattccgctagtcacatgccgattgaattgact
gcagagaagaagcagtataacttggagaagatgtattcttacaaagcagttgataaaatt
tcttctgggagtaacattcctccaaaaagtatcatgctgcagtcaccgggaaaatcttac
agtttctcagaacctgttatttcggcccaagagcaagagactcagactgtgttatatggc
aaattagtagaagcaagacagaaacatgccaataagatggatgttcctccagctattctg
gcaacaaataagatactgatagatatggccaaaatgagaccaacgacagttgaaaatgtg
aaaaggattgatggtgtttctgaaggcaaagctgctatgttggcccctctgttggaagtc
atcaaacacttctgccaagtaaacagtgttgagacggacctttttccaactgcaaaacct
caagaagaacagaaggaaagtgtggtggcaagaaataaaaaatgctcactttcacagtct
gcggccatcacttactccttattccaggagaagaagatgtctgtggagagcatagctgag
aacaggattctgcctctcacagcggttggcatgcacttatcccaagccgtgagagctggc
tgccccctggacatggagcgggcaggcctgactctggaggttcggaagatcattgctgat
gttatccgaaatccccctgtcaactcagatatgagtaaagttaaattaattagaacgcta
gttcctgaaaacattgacacataccttatccacatggcaattgatatcctggaaaatgac
catgacagcagaccgtcaggccacagaactgtatgtgattccagcaagaagagatgcttc
cccagtgctgaagagagctgttcagattctaagagaagcaaggaagagacaggcactaat
accaagacttcaactgaaacttcaaagagagtattacctaagtggtttgccaaaacagtt
tctgataccagcaagaaaccagtggcaaaaacaaaaaaagaaggtctttttagttaa
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