Oryctolagus cuniculus (rabbit): 100342038
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Entry
100342038 CDS
T03373
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100342038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocu03009
]
100342038
Enzymes [BR:
ocu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
100342038
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
90S particles
Other 90S particles
100342038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
100342038
NCBI-ProteinID:
XP_002712792
Ensembl:
ENSOCUG00000003603
UniProt:
G1SK16
LinkDB
All DBs
Position
8:complement(78665004..78671863)
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AA seq
244 aa
AA seq
DB search
MAAPNGEFQPREWRSGEREEDWDAAAPKRPRLGAGSKSGGRRLIVVLEGASLETVKVGKT
YELLNCDKHKSMLLKNGRDPGEVRPDIAHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV
NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSV
PVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSLSNYPLSAALTCAKLTTAFEEV
WGII
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccccaatggtgaattccagcctcgtgagtggcgctctggggagcgggaagag
gactgggatgctgcggcgcccaagcggcctcgactcggggcaggaagcaagagcggaggc
cgcaggctcattgtggtgctggaaggggccagtctggagacagtcaaggtagggaagaca
tacgagctactcaactgtgacaagcacaagtccatgttgttgaagaatggacgagatccc
ggggaagtaagaccagacatagcccaccagagcttgctgatgctgatggacagtcccctg
aaccgagcgggcctgctgcaagtttatatccacacgcagaagaacgtgctgatcgaagtg
aacccgcagacgcgaattcccagaaccttcgaccgcttctgtggactcatggttcagctt
ttacacaaactcagtgttcgagcagctgatggcccccagaaactcttgaaggtgattaag
aatccggtgtcagatcacttcccagttggatgcatgaagattggtacttctttctccgtc
ccagtcgtcagcgacgtaagggagctggtgcccagcagcgaccctattgtttttgtggtt
ggggcctttgcccatggcaaggtcagcgtggagtacacagagaagatggtgtccctcagc
aactaccccctttctgcggctctcacctgtgcaaaactcaccacggcctttgaagaagtc
tggggcattatctga
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integrated database retrieval system
