Oryctolagus cuniculus (rabbit): 100342140
Help
Entry
100342140 CDS
T03373
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03030
DNA replication
ocu03410
Base excision repair
ocu03420
Nucleotide excision repair
ocu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100342140
03410 Base excision repair
100342140
03420 Nucleotide excision repair
100342140
03430 Mismatch repair
100342140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocu03032
]
100342140
03036 Chromosome and associated proteins [BR:
ocu03036
]
100342140
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100342140
DNA replication proteins [BR:
ocu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100342140
DNA Replication Termination Factors
ELG1-RFC complex
100342140
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100342140
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100342140
Check point factors
HRAD17(Rad24)-RFC complex
100342140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
DUF815
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
AAA_24
KH_DUF2096_C
Mg_chelatase
RuvB_N
AAA_28
SLFN-g3_helicase
AAA_19
AAA_5
ResIII
Viral_helicase1
AAA_7
Motif
Other DBs
NCBI-GeneID:
100342140
NCBI-ProteinID:
XP_002716498
Ensembl:
ENSOCUG00000005014
UniProt:
G1SN08
LinkDB
All DBs
Position
14:79931211..79951770
Genome browser
AA seq
364 aa
AA seq
DB search
MQAFLKGTSASTKLPPTKDRGVAASAGSSAETKKAKPVPWVEKYRPKCVDEVAFQEEVVS
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAEKENVIISNEGIAYLVKVSEGDLRK
AITFLQSATRLTGGKEVTENVITDIAGVIPPETINGIFAACQGGSFDKLEGVVKDLIDEG
HAATQVVNQLHDVVVENDDLSDKQKSIITEKLAEVDKCLADGADEHLQLLSLCATVMQQL
TQNC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctcaaaggcacatctgccagtactaagctgccaccgaccaaggatcga
ggagtagctgctagtgcaggaagcagtgcagagaccaagaaagccaaacctgttccgtgg
gtggagaaatatcgcccaaaatgtgtggatgaagttgctttccaggaagaagtggtttcc
gtgctgaagaagtctttagaaggagctgatctccctaatctgttattttatgggccacct
ggaactgggaaaacatccactatattggcagcagctagagaactctttgggcctgaactt
ttccggttaagggttcttgagttaaatgcatcagatgaacgtggaatacaagtagttcga
gagaaagtgaaaaattttgctcaattaactgtgtcaggaagtcgttcagatgggaagcca
tgtcctccttttaagattgtgatcttggatgaagcagattctatgacctcagctgctcaa
gcagctttaagacgtaccatggagaaagaatcaaaaaccacccggttctgtctcatctgt
aactatgtaagccgaataattgaacccctgacctctaggtgttcaaaattccggttcaag
cctttgtcagataaaattcaacagcagcgattactggacattgctgagaaggaaaatgtt
ataattagcaatgagggaatagcttatcttgttaaagtgtccgaaggagacttgagaaaa
gccattacttttcttcaaagtgctactagactcacaggtggaaaggaggtcacggaaaat
gtaatcacagacattgctggggtaataccaccagaaacaatcaatggaatatttgctgca
tgtcaaggtggctcttttgacaaactagaaggtgtggtaaaggacctaatagatgagggt
catgcagcaactcaggttgtaaatcaacttcatgatgtggttgtggaaaatgacgacctc
tctgacaaacagaagtccattattactgaaaaattggctgaagttgacaagtgcttagca
gatggcgctgatgagcatctgcaattgctcagcctttgtgccactgtgatgcagcagcta
actcagaattgttaa
DBGET
integrated database retrieval system
