Oryctolagus cuniculus (rabbit): 100342202
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Entry
100342202 CDS
T03373
Name
(RefSeq) synaptobrevin homolog YKT6 isoform X2
KO
K08516
synaptobrevin homolog YKT6
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04130
SNARE interactions in vesicular transport
ocu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100342202
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100342202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100342202
Membrane trafficking [BR:
ocu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
100342202
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
100342202
NCBI-ProteinID:
XP_008260041
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All DBs
Position
10:41724108..41734175
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AA seq
198 aa
AA seq
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MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRASVQEFMTFTSQLIVERSAKGSRASVK
EQEYLCHVYVRNDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIEWPVGSPATIQY
TALDGHLSRYQNPREADPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCAIM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctacagcctcagcgtcctctacaaaggcgaggccaaggtggtgctgctcaaa
gccgcgtacgacgtgtcctccttcagcttcttccagagggccagcgtccaggagttcatg
accttcacaagtcagctgattgtggagcgctcggccaaaggcagcagagcttccgtcaaa
gagcaagagtacctgtgccatgtctatgtccggaatgacagtctcgcgggtgtggtcatt
gctgacagtgagtacccgtcccgggtcgccttcaccctgctagagaaggtactggacgag
ttctccaagcaggtcgacaggatagagtggccagtggggtcccctgccacaatacagtac
acggcactggacggtcacctcagcagataccagaaccctcgagaagcagaccccatgact
aaggtacaagcggaactagacgagaccaaaatcattctgcacaacaccatggagtctctg
ttagagcgaggggagaagctggatgacctggtgtccaagtcggaagtgctgggaacacag
tctaaggccttctacaagactgcccggaagcagaactcctgctgtgcaatcatgtga
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