Oryctolagus cuniculus (rabbit): 100342533
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Entry
100342533 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04137
Mitophagy - animal
ocu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100342533
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100342533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100342533
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
100342533
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100342533
Multi subunit type E3
ERAD complex
100342533
LMBR1L-GP78-UBAC2 complex
100342533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
SVIP
Motif
Other DBs
NCBI-GeneID:
100342533
NCBI-ProteinID:
XP_002711572
Ensembl:
ENSOCUG00000017212
UniProt:
A0A5F9DBB0
LinkDB
All DBs
Position
5:complement(12734267..12778199)
Genome browser
AA seq
643 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALSQPEAGPGEQEPLTASLQPKAPAP
AGPGPEGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPM
SSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIH
LWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLF
HNSCLRSWLEQDTSCPTCRMSLNIADSNRVREDHQAENLDENLVPVAAAEGRPRLNQHNH
FFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDL
QLTRSVEITTDNILEGRIQVPFPTQRSDSVRPALTSPVERPSSDQDENEVSPQAERMPLD
LNPRLEEPVDFSELEAEPGEVEDFEARGSRFSKSADERQRMLLQRKDDLLQQARKRFLNK
SSEEDAAAESLLPPAGPSPDPVALRRRMLAAAAERRLQKQQTS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctcgagcgcttcccctggcccagcctccgcacctacacgggcctc
agcggcctggccctgctcggcaccatcgtcagcgcctaccgcgccctcagccagcccgag
gccgggcccggcgagcaggagccgctaacggcctcgctgcagcccaaggcgcccgcgccc
gcggggcctggccccgagggaccccgggcccgcgacgtggcccagtacctgctttcggac
agcctcttcgtgtgggttctggtgaatactgcttgctgtgttttgatgttggtggctaaa
ctcatccagtgcattgtgtttggccctcttcgagtgagtgagagacagcacctcaaggac
aagttttggaattttattttctacaagttcattttcatttttggtgtgctgaatgttcag
acagtggaagaagtggtcatgtggtgcctctggtttgctggacttgtatttctgcatctg
atggttcagctctgcaaggaccgatttgaatatctttccttttctcctaccaccccgatg
agtagccatggccgagtcctgtccctgttgattgctatgctgctttcctgctgtgggtta
gctgttgtctgctgtgtcactggctacacccatgggatgcacaccttggctttcatggct
gcagagtctcttcttgtgacggtgaggactgctcatgtgattttacgatatgtcattcat
ctctgggacctcaaccacgaggggacctgggaaggcaaggggacgtacgtgtattacaca
gattttgtcatggagctcacactcttgtccctcgacctcatgcaccacattcacatgttg
ttatttggcaacatctggttatccatggccagcctggtcatcttcatgcagctgcgttac
ctgttccatgaggttcagcgtcgaattcgtcggcacaagaattacctgcgggtcgttgga
aacatggaagccaggtttgcagttgcaactcctgaggagttggctgtcaacaatgacgac
tgcgccatctgctgggactccatgcaggctgcccggaaactgccctgtggacaccttttc
cacaattcctgtcttcgttcctggctagaacaagatacctcatgtccaacatgcagaatg
tctctcaacatcgctgacagtaatcgtgtcagggaggaccatcaagcagagaacttggat
gagaatttggttccggtagcagctgctgaaggcagacctcgcttaaaccagcacaaccac
ttcttccacttcgatgggtcccggattgcaagctggttgccgagtttttctgttgaagtg
atgcacaccaccaacatccttggcattacacaggcaagcaactcgcagcttaatgcgatg
gctcatcagattcaagagatgtttccccaggtgccataccacctggtgctgcaggacctc
cagctcacacgctccgtggaaataacgaccgacaacattttagaaggacggattcaagta
ccttttcctacacagcggtcagacagcgtgaggcctgcgttgaccagtcctgtggaaagg
ccaagcagtgaccaggacgagaacgaagtttctcctcaggcggaacgcatgccactggac
ctcaatccccgcctggaggagcccgtggacttcagcgagttggaagcagagcccggcgag
gtggaggactttgaggcgcggggcagccgcttctccaagtctgctgacgagagacagcgc
atgctgctacagcgcaaggacgacctcctgcagcaggctcggaagcgtttcttgaacaaa
agctccgaagaggatgcggccgccgagagcttgctcccgcccgcgggcccgtcccccgac
cccgtggcgctgcggcggcggatgctggcggccgccgccgagcgcagactgcagaagcag
cagacgtcctag
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