Oryctolagus cuniculus (rabbit): 100342629
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Entry
100342629 CDS
T03373
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100342629
Membrane trafficking [BR:
ocu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100342629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
Crescentin
Motif
Other DBs
NCBI-GeneID:
100342629
NCBI-ProteinID:
XP_008257688
Ensembl:
ENSOCUG00000016191
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All DBs
Position
8:98840013..99016128
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AA seq
1036 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGLFDCQSPTSPFMGSLRALHLVEDLRGLLE
VMETDEKEGLRCQVPDSTAETLVAWLQSHLTNGHLPGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLK
LKLTAVEKDRLDYEDRFRDTEGLVQEISDLRLKVTEMDNEKLQYEKKLKSTKSLMAKLSS
MKIRVGQMQYEKQRMEQKWASLQEELASLKEQLEEKECEVKRLQEKLACRMRGEGVEILD
RDENFKKKLKEKNIEVQKMKKAVESLMAANEEKDRKIEDLRQCLNRYKKMQDPMGSAQGK
QGRDGDYDDLLHSSSVSTLLDAQGFSDVEKSPSPTPGMGSPSCDPFNTSVPEEFHTSTLQ
VTIPSLLPAPGSMETSEKVKLPSKPEASFEENDGKITLGNAAETQLSDGLLTSSLQKSSS
LGNLKKETAEGEKESLSKSSEEPAPGDSSPVASLPPQTRRHEASADDNPFGTRKARSSFG
RGFFKIKSGKRTASAPNLDRNRSASAPTLAETEKEASEHLDLAGTSSRPRESQGHSPFQI
SPPSPDSKKKSRGIMKLFGKLRRSQSTTFNPDDMCEPEFKRGGTRATAGPRLGWSRDLGQ
SNSDLDMPFAKWTKEQVCNWLVEQGLGSYLSSGKHWIASGQTLLQASQQDLEKELGIKHS
LHRKKLQLALQALGSEEETNHGKLDFNWVTRWLDDIGLPQYKTQFDEGLVDGRMLHYMTV
DDLLSLKVVSLLHHLSIKRAIQVLRLNNFEPNCLRRRPSDENSITPSEVQQWTNHRVMEW
LRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPNKTLLRRHLATHFNLLIG
AEAQHQKRDAMELPDYVLLTATAKVKPKKLTFSNFGNLRKKKQEDGEEYVCPMELGQVSG
SASKKGFKPGLDMRLYDEDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDDMFKDF
AACSPSTSITDEDSNV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgacgcaagtgacatgttggcggcggcgctggagcagatggatggcatcata
gcaggttctaaggcgctggagtattccaatgggctctttgattgccagtctcccacgtct
ccgttcatggggagcctgcgcgcgctgcacctcgtggaggacctgcgtgggctgctggag
gtgatggagacggatgagaaggaaggcctcaggtgccaggtcccggactccacggcggag
acgctggtcgcttggctgcagagccacctgacgaacggacacctccctgggaacggagac
gtgtatcaggagaggctagcacgcttggaaaatgataaagagtcgctcgttctccaggtg
agtgtgctaacagaccaggtggaggcccagggagagaagattcgagacctggagttctgc
ctggaggagcacagggagaagctgaacgccacggaggagatgctgcagcaggagctcctg
agtaggacgtccttggagactcagaagttagatctcatggcggaaatttccaacttgaag
ttgaagctgacggctgtggagaaggacagactggattacgaggacagattcagagacacg
gaagggctggttcaggagatcagtgacctgaggttgaaggtcactgagatggacaacgaa
aaacttcagtacgaaaagaagctcaagtccaccaaatctctaatggccaaactttctagc
atgaaaatcagagttggtcagatgcagtatgaaaagcagcggatggagcaaaagtgggcg
tccctgcaggaggagctggcgtctctgaaagagcagctggaagagaaggagtgtgaggtc
aaaaggctgcaggagaagctggcctgcaggatgagaggagagggggtcgagattctggac
agagatgaaaattttaaaaagaagctcaaagaaaaaaatattgaagtccaaaaaatgaaa
aaggccgtggagtctctcatggcagcgaatgaagaaaaggatcggaaaatagaagatctt
cggcagtgcctgaacaggtacaagaaaatgcaagacccaatgggatcggcccagggtaag
caaggcagagatggtgactatgacgacctgctccattccagttccgtctctaccctgctg
gacgctcagggcttcagtgatgtggagaaaagcccctcgcccacccctgggatggggtct
cccagttgcgacccatttaacacgagtgttccagaagagttccacaccagcaccttgcaa
gttacaatcccttcattactgccagcacctggaagcatggaaacttctgaaaaagtcaag
ttgccttccaagccggaagcttcattcgaagagaacgatggaaaaataacccttggcaat
gctgctgaaacccagctgtctgatggtcttctaacttcgagtctgcaaaagtccagcagc
ctgggcaacctgaagaaagagacagcagaaggggagaaggagtccctttcaaagtcatct
gaggagccagccccgggggacagcagccctgtggcgagcctgccgccccaaacccggcga
cacgaggcctccgccgacgacaacccgtttggcactcggaaagccaggtcttccttcggc
cggggcttctttaagataaagagcggcaagaggacggcgagcgcgccgaacctggaccgt
aatcgaagtgccagtgcacccaccctagctgagacagaaaaggaggcatccgagcacctg
gatctggctggtacgtcttctcggccaagagagtcgcaggggcacagtcccttccagatc
tctcccccgtctccagattccaaaaagaaatccagaggtatcatgaaactgttcggaaaa
cttcggagaagtcagtccactacattcaacccagatgacatgtgtgagcctgaattcaaa
agaggagggacaagggcaacagcagggccccgactgggttggtctcgagatttgggccag
tctaacagtgacttggatatgccatttgccaagtggaccaaggagcaagtttgcaactgg
cttgtggaacagggcttgggctcctacctgagttccggcaagcactggattgcatctggc
caaacacttttgcaagcttctcagcaagatctagaaaaggaacttgggatcaagcattca
cttcatcgaaagaagctgcagctggcactgcaagccctgggatcagaggaagaaaccaac
cacgggaagctggatttcaactgggtcactagatggctggatgatatcggcctcccccag
tataagacccagtttgatgaaggactggttgatggtcggatgctgcattacatgaccgtt
gatgacttgctgtcgttgaaggttgtgagcctgctccaccacctcagcatcaaaagggcc
atccaggtcctgcgcctcaacaacttcgaacccaactgcctgcggaggcggccctcggac
gagaacagcatcaccccctccgaggttcagcagtggaccaaccatcgcgtgatggagtgg
ctacgctccgtggacctggcggagtacgccccgaacctcagaggcagcggcgtccacggc
gggctcatggtgctcgagccgcgtttcaacgtggaaaccatggctcagttactgaacatc
ccacccaacaagaccctgctgcgcaggcacctggccacccacttcaaccttctgatcggc
gccgaggcccagcaccagaagcgagacgccatggagctgccggactacgtcctgctcacg
gccacggccaaagtgaagccaaagaaacttaccttcagcaattttgggaacctgagaaag
aagaagcaggaagatggggaagaatatgtttgtccgatggagttgggacaggtgtcagga
agtgcatccaagaaaggatttaaacctggtctggacatgcgtctctacgacgaggacgac
ctggaccggctagagcagatggaagattccgaagggacggtcagacagattggcgccttc
tccgagggtatcaacaacctgacgcacatgctcaaggaggatgacatgttcaaagatttc
gccgcctgctcaccgagcaccagcatcacggacgaagactccaacgtctga
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integrated database retrieval system