Oryctolagus cuniculus (rabbit): 100342733
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Entry
100342733 CDS
T03373
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100342733
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100342733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
100342733
NCBI-ProteinID:
XP_008267773
Ensembl:
ENSOCUG00000007531
UniProt:
G1ST93
LinkDB
All DBs
Position
17:65312616..65338807
Genome browser
AA seq
669 aa
AA seq
DB search
MQNSHIDEYRNSSNGSTNNSSEVVAEHPPDFSTEIMNVTEMEQSPDGSPSVNASAEESEM
TNAVDLPVTVAETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDK
FFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPG
DPETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKDHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPA
KLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQD
AIKNAKSNNESSFYAIKLARHLFKIQKNLQKSRKVLLEAIERDKENTKLYLNLLEMEYSG
DLKQNEENILSCFDKAVHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKE
QDSLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNY
GQYYPPPPT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattcccacatagatgagtacagaaattctagcaatggcagcactaacaacagt
tcagaggtagtggcagaacaccctcctgatttcagcactgagattatgaatgttacggaa
atggaacagtcacctgatggctctcccagtgtgaacgcatctgcagaagaaagtgaaatg
acaaatgctgtggaccttccagtgacagtggcagaaacagaagcaaatttccctccagaa
tatgaaaaattttggaaaactgtagaaaataatccacaggattttacaggctgggtatat
ttgcttcagtatgtagaacaggagaatcacttgatggctgccaggaaggcatttgacaaa
tttttcatacactatccgtattgctatggttactggaaaaagtatgcagaccttgaaaag
cgacatgacaacattaaacaatcagatgaggtttatcggcgggggcttcaggcaatacct
cttagtgttgacctttggatacattatataaacttcttaaaagaaacattggaccctggt
gatcctgagaccaacagtacaatcagaggaacttttgagcatgccgttctagctgcagga
acagatttccgatctgacagactgtgggaaatgtatataaactgggaaaatgagcaggga
aacctgagagaagttacagctatctacgatcgtattcttggtattccaacacagctgtat
agtcatcattttcagagatttaaagaccatgtacagaataacttgcctagagatctttta
actggtgaacagtttatccagctgagaagggaattagcgtctgttaatgggcatagtggt
gatgatggtccccctggtgatgatctcccatcaggaattgaagacataactgatccagca
aagctaattactgaaatagaaaacatgagacatcgaatcattgagattcatcaagaaatg
tttaattataatgaacatgaagttagtaaaaggtggacatttgaagaaggtattaaaaga
ccttattttcatgtgaaaccgttggaaaaggcacaacttaaaaactggaaagaatactta
gaatttgaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtc
atatcatgtgccctctatgaggagttttggatcaagtatgccaagtacatggaaaaccat
agcattgaaggagtgaggcatgtcttcagcagagcttgtactattcatcttccaaagaaa
cccatggtgcacatgctttgggcagcatttgaggagcaacagggcaatattaatgaagcc
aggaatatcttgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgcga
agagtaagtttagaacggcggcatggaaatatggaagaagctgaacatttgcttcaggat
gccattaaaaatgccaaatcaaataatgagtcatcattttatgctatcaaactagctcga
catcttttcaaaatacaaaaaaaccttcaaaaatcaagaaaggtgcttttggaagcaatt
gaaagagacaaagagaacacaaaattatacctcaatttacttgaaatggaatatagtggt
gatctcaaacaaaatgaagaaaatatcctcagttgttttgacaaagctgtacatggttca
ttacctattaaaatgagaattacgttctctcagagaaaagtggaattccttgaagatttt
ggttctgatgttaataagctcctgaatgcttatgatgaacatcaaaccctcctaaaagaa
caggattctttaaaaaggaaagcagaaaatggatcagaagaaccagaggagaagaaagca
cacacagaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaat
caagctgcttataattatagtgcctggtatcaatacaattatcagaatccttggaattat
ggacagtattatcctccccctccaacctga
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