Oryctolagus cuniculus (rabbit): 100342919
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Entry
100342919 CDS
T03373
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
ocu03420
Nucleotide excision repair
ocu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100342919
09124 Replication and repair
03420 Nucleotide excision repair
100342919
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100342919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100342919
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100342919
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100342919
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100342919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
100342919
NCBI-ProteinID:
XP_002721410
Ensembl:
ENSOCUG00000017633
UniProt:
G1TE38
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVNTTDSSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNGEPSSIDGNSGDADCFQPAVKRAKLQESIEYEDL
GKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPRLTQVLS
SGAASCTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFPVNT
PFLEEKVIKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQSRR
LMKKT
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcctctgaagaagtattgctgattgtaaagaaggtgcgacagaagaaacag
gatggagctctgtacctcatggcagaaagaattgcttgggcacctgaaggcaaagatagg
tttacaatcagccatatgtatgcggacattaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcagcttcagctggtcctgcatgcaggggacacaacaaacttccatttttcc
aatgaaagcacagcagtgaaagagcgtgatgcagtaaaggaccttcttcagcagctgctg
cccaaatttaagaggaaagcaaataaagaactggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagacctggttgtgagtcaagtgatcagtgctgag
gaattctgggccaatcgcttaaatgtgaacacaacagatagttcttccacatccaaccat
aagcaggacgttggcatttctgcagcatttctggctgatgtccggccccaaacagatggc
tgtaatggtttgagatacaatttaacttctgatatcattgagtccatttttaggacttac
ccagcagtaaaaatgaaatatgcagaaaatgttcctcacaacatgacagaaaaggaattc
tggacgcggtttttccagtcccattattttcatagggacaggctgaatacagggtcaaag
gatctctttgcagaatgtgccaaaatagatgaaaaaggattaaaaacaatggtttcatta
ggagtaaagaacccactactggatttgacagctttagaggataagccattagatgagggc
tatggcatttcctccgtgccgtctgcttccaattctaagtccataaaggagaatagtaat
gctgccatcatcaagaggttcaaccatcacagtgccatggttctggcagcaggtctcagg
aaacaagaagcacaaaatggtgagcccagcagcattgatggaaattccggagatgccgac
tgctttcagccagcagtcaaaagggcaaagttacaagaatccattgaatatgaagacttg
ggaaaaaataattctgtaaaaacaattgcactaaaccttaagaagtctgataggtattat
catggtccgactccaatccagtcactacagtatgcaacaagtcaggacattattaattct
tttcaaagtattaggcaagaaatggaagcttatacacctaggttaactcaggttctctca
agtggtgctgccagttgtaccattacagcattgtcacccggaggagcacttatgcaagga
gggacacagcaagccataaaccagatggtgccaaatgatattcagtctgaattgaaacac
ttgtatgtggctgttggagaacttctgcggcatttctggtcctgttttcctgttaataca
ccattcctagaagaaaaggtaataaaaatgaaaagtaatttggaacgattccaggttaca
aagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaatttggtgagc
cacatagaagagatgctgcagacagcctacaacaagctccacacgtggcagtctcggcgt
ctaatgaagaaaacgtga
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