Oryctolagus cuniculus (rabbit): 100343053
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Entry
100343053 CDS
T03373
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100343053
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocu01001
]
100343053
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100343053
Enzymes [BR:
ocu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100343053
Protein kinases [BR:
ocu01001
]
Serine/threonine kinases: Other
Other
100343053
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100343053
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mahjong_helical
DCAF1_helical
DCAF1_N
DCAF1_4th
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
100343053
NCBI-ProteinID:
XP_008258945
Ensembl:
ENSOCUG00000010328
UniProt:
G1SZ31
LinkDB
All DBs
Position
9:97371443..97461195
Genome browser
AA seq
1507 aa
AA seq
DB search
MTTVAVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVASRLESKRPSPRKLSSEPLLPLDEEAVDMDYGDMTGDAVDGEQEEASGDVEIS
FHLDSSHKTSSRVNSVTKPEEGGLKKNKSAKQGDRENFRKAKQKLGFSSSDPDRVFVELS
NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI
DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL
SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY
DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK
QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL
LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS
IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEH
TLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL
FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ
SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP
RTPRIANGIATRLGSHAAVGASAPSAPAVHPQPRPPQGSLALPGPSYAGNSPLIGRISFI
RERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEFLREQHARCK
NPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRF
RPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITH
LEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIA
HIYDIQIGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM
NISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDD
LMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNM
DTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED
ENNENAAEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD
IILSLNE
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagcggtacatgtggactccaaagctgagctcactaccctgctggagcag
tgggaaaaagaacatggcagtgggcaagacatggtccctattcttaccaggatgtctgaa
ttgatagaaaaagaaactgaagaatatcgtaaaggagatccagacccatttgatgatcga
catcctggtcgagctgatccagagtgtatgctgggccacttgctgagaatactcttcaag
aatgatgatttcatgaatgcactggtaaatgcatatgtgatgacaagccgagaaccacct
ttaaacactgcagcttgcagactcctgctggacatcatgccagggctagaaactgctgtt
gtatttcaggaaaaggaaggaattgttgagaatcttttcaaatgggcccgagaggctgat
cagccattgaggacatattctactggactgttaggaggtgctatggaaaatcaagacatt
gctgccaactacagggatgaaaattcacaattggtggctatagtgcttcgaaggttgagg
gagctacagcttcaggaagtggcttcgcggctagaaagcaaacgtcccagcccacggaag
ctctcttctgagccccttctgcctctggatgaggaagctgtggatatggactatggtgac
atgacgggagatgcagtggatggagaacaagaggaagcttctggagacgtggagatctcc
tttcatcttgattcaagccacaagaccagtagtagagtgaattcagtaaccaaacctgag
gaaggaggactgaagaaaaacaagtcagcaaaacagggtgatagagagaactttaggaaa
gccaagcagaagttggggttctcctcttcggatccagatcgcgtgtttgttgagctgtct
aatagcagctggtcagaaatgtccccctgggtgattgggaccaattacaccctttatcct
atgactcctgctattgagcagcgcctcattcttcagtatttgacccctctaggagagtat
caggagttacttcccatattcatgcaacttggatcacgagaattgatgatgttctatatt
gacctgaaacagactaatgatgtcctgcttacgtttgaggccctcaagcacttagcatct
ctcctgctccataacaaatttgccacagaatttgttgctcatggtggagtacagaaattg
ctggaaattcctcgaccgtctatggctgcaactggtgtatccatgtgcttgtattacctg
tcttacaaccaggacgccatggaaagagtttgcatgcatccacacaacgttctatctgat
gtggtaaactataccctgtggttaatggagtgttctcatgcctcaggatgctgccatgct
accatgtttttctcaatttgtttctcatttcgagctgtcttggagctctttgaccgctat
gatggtcttcgtcggctggtgaacttgatcagtactttggagattctaaatttggaagat
caaggtgcacttctgagtgatgatgaaatatttgctagccgccaaactgggaaacatacc
tgcatggccttgcgcaagtactttgaagctcacctggccattaaattggaacaagtgaag
cagtcgcttcagaggactgagggtggcattcttgttcaccctcaacccccatacaaggca
tgttcatatacccatgaacagattgtggagatgatggagtttttgatagaatatggccca
gcacagctatactgggaaccagctgaagtcttcctcaaactgtcttgtgtgcaactcttg
ttgcagcttatttctattgcctgcaattggaagacctattatgcaaggaatgatactgtg
cgctttgctttggatgtcctggctattcttactgtggtgccaaaaatccagcttcagttg
gcagaatcagtggatgtgttggacgaagctggctctaccgtctccactgtgggtatcagc
attattttgggagtggctgagggtgagttctttatccatgatgctgaaattcagaagtca
gcacttcaaattatcatcaattgtgtgtgtggcccagataaccgaatatccagtattggc
aaatttatctctggaactcctcggagaaagctgcctcagacccccaaaagcagcgagcat
accctggccaagatgtggaatgtggtccagtccaacaatggcatcaaggttctcttgtca
ttgctgtccattaagatgcccatcaccgatgcagaccagatccgtgccctggcctgcaag
gccctggtgggcctgtctcgcagtagcactgtccggcagatcatcagcaaactgcccctt
ttcagcagctgccagatccagcagctgatgaaggagcccgtgctacaggacaagcgcagt
gaccacgtcaagttctgcaaatatgcagctgagctcattgaacgggtgtcaggaaagccg
ctcctcattggcactgatgtgtccctagcacgactgcagaaggcagatgttgtcgcccag
tcaaggatctccttccctgagaaagagctacttctgttgatacgaaaccatctcatttct
aaagggcttggagaaacagcgacggtgctgacgaaagaggccgacctgcccatgactgct
gcctcccattcttctgccttcaccccagtaactgctgctgcttcacctgtctctcttccc
cgaacccctcgaattgccaatggcattgcaactcgactgggcagccatgctgccgtgggt
gcctctgccccctctgcccccgctgttcatcctcagccacggccccctcagggttcacta
gctttgcctggcccatcttatgcaggcaactcccctttgattggtaggatcagttttatc
agagagaggccatcaccttgcaatggcaggaaaatcagagtgttgcggcaaaagtcggac
catggcgcctacagccaaagcccagccataaaaaagcagctggacagacatcttccttcc
ccgcctacgctggacagtatcatcacagagtttcttagagagcaacatgctcgatgcaag
aacccagttgctacttgcccacctttctctctctttactcctcaccagtgtcctgagcca
aaacagaggcggcaagcgccaataaactttacctcacggctaaaccgcagggcatcattt
ccaaagtatggaggggtagatggtggatgctttgataggcaccttatctttagcagattc
cgtcctatttcagtgttccgggaagccaatgaagatgagagtggcttcacctgctgtgcg
ttctcagcacgggagaggttcctgatgcttggcacctgcacagggcagctgaagctctat
aatgtgtttagtggacaggaggaggccagttacaactgtcacaactcggctatcacacac
cttgaaccttctagggacgggtccttgctgctgacatctgctacttggagccagcctttg
tctgcactttggggaatgaaatcagtatttgatatgaagcattccttcacagaagaccac
tatgttgagttcagtaagcactctcaggatcgagtcataggcacgaagggagacattgcc
cacatttatgatattcagattggcaacaagctgttgactctgtttaacccagatcttgct
aacaactacaagaggaactgtgccacctttaatcctacagatgatcttgtcttaaatgat
ggcgtcctctgggatgtccgctctgcacaggccatccacaagtttgacaagttcaacatg
aacatcagtggcgtttttcatccgaatgggctggaagtcatcattaatactgagatttgg
gaccttcgaactttccatctcttacacactgttcctgctttggatcagtgtcgtgtggtg
ttcaaccatacggggactgtgatgtatggagctatgttgcaggcggacgatgaagatgac
ttaatggaagaaaggatgaagagcccttttgggtcatccttccgaacatttaatgcaact
gactacaaacctatagcgaccattgatgtgaaacggaacatctttgacttgtgcacggac
accaaagactgctatcttgctgtcattgagaatcaaggtagcatggatgccctgaacatg
gacacagtgtgcagactgtatgaagtaggcaggcagcggctggcagaggatgaagatgaa
gaagaggaccaggaagaggaagagcaggaggaagaagacgatgatgaagatgacgacgac
actgatgatttggatgagctggacacggatcagctgctggaggcagagttggaggaggat
gagaacaatgagaatgctgcagaggatggggacaatgacttctctccttctgacgaggag
ctggccaacctcctggaggagggagaggatggcgaagacgaagactctgatgcggatgaa
gaagtggaactgatcctgggggacaccgacagctcggacaactctgatctggaagatgac
atcatcttatctctgaatgagtga
DBGET
integrated database retrieval system
