Oryctolagus cuniculus (rabbit): 100343174
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Entry
100343174 CDS
T03373
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100343174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100343174
03036 Chromosome and associated proteins [BR:
ocu03036
]
100343174
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100343174
Coactivators
SAGA/TFTC/STAGA complex
100343174
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100343174
STAGA complex
100343174
TFTC complex
100343174
SAGA complex
100343174
SLIK complex
100343174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Bromo_TP
TFIID-18kDa
Histone
Motif
Other DBs
NCBI-GeneID:
100343174
NCBI-ProteinID:
XP_051703714
Ensembl:
ENSOCUG00000023479
LinkDB
All DBs
Position
6:27603254..27609994
Genome browser
AA seq
716 aa
AA seq
DB search
MVRETGNSVLVGTLGCFPLCLLPVSPLQHPPSGRRSSRMAEEKKLKLSNTVLPSESMKVV
AESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEP
LYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQ
PAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGPLKSKGQGAAPADGKGKEKKAPPLLE
GTPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTF
ISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPD
VDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAE
LGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQSLLLKHCAPVLAKLRPPP
DNQDAYRAEFGSLGPLLCSHVVKARAQAALQAQQVNRTTLTITQPRPTLTLSQAPQPGPR
TPGLLKVPGSITLPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSASSTQQVLSLSTSAPG
SGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPA
SHPSPVPPPSSSPSPLGGSALCGGKQEAGDSPPPAPGTPKANGSQPSGSGSPQPAP
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggtaagggagactgggaattcggttttggtggggactttgggttgttttcctctttgc
ctcctccctgtctctcccctacagcatcctccttcagggaggaggagttccagaatggct
gaggagaagaagctgaaacttagcaacaccgtgctgccctcggaatccatgaaggtggtg
gccgagtccatgggcatcgcccagatccaggaggagacctgccagctgctgaccgatgag
gtcagctaccgcatcaaggagatcgcccaggacgctttgaagttcatgcacatgggtaag
cggcagaagctcaccaccagcgacattgactacgccctgaagctgaagaacgtcgagccc
ctctatggcttccacgctcaggagttcatccctttccgtttcgcctctggcgggggacgg
gagctgtacttctacgaggagaaggaggttgatctgagcgacatcatcaacaccccgctg
ccccgggtgcccctggacgtctgcctcaaagctcactggctgagcattgaaggctgccag
ccagctataccagagaacccacccccagctcccaaagagcagcagaaggctgaggccaca
gaacccctcaagtccacaaagccgggccaggaggaagatgggcccctgaaaagcaaaggt
caaggggccgcgccagccgacggcaaagggaaagagaagaaggcaccgcccctgctggag
gggacccctttgcgcctgaagccccggagcatccacgagttgtccgtggagcagcagctg
tactacaaggagatcacagaagcctgcgtggggtcctgcgaggccaagagagcggaggct
ctgcagagcattgctacggacccgggcctctaccagatgctgccgcgattcagcaccttc
atctcagagggggtccgtgtgaacgtagttcagaacaacctggccctgctcatctacctg
atgcgcatggtaaaggcgctgatggacaaccctacgctgtatctagaaaaatacgtgcat
gagctgattccagctgtgatgacctgcattgtgagcaggcagctgtgcctgcgacccgat
gtggacaatcactgggcactccgggattttgccgcccgcctggtggctcagatctgcaag
catttcagcacaaccactaacaacatccagtcccggatcaccaagaccttcaccaagagc
tgggtggacgagaagactccgtggacaactcgttacggctccatcgcaggcttggcggag
ctgggacacgatgtgatcaagactctgattctgccacggctgcagcaggagggggagcgg
atccgcagcgtcctggacgggcccgtgctgagcaatatcgaccgcatcggggccgaccac
gtgcagagcctcctcctgaaacactgtgcccctgttctggcaaagctgcgcccaccgcct
gacaatcaggatgcctatcgggcagaatttgggtccctcgggcccctcctctgctcccac
gtggtcaaggcccgggcccaggctgctctgcaggctcagcaggtcaacaggactacgctg
accatcacacagccccggcccacactgaccctctcacaggcccctcagcctggccctcgg
acccctggcttgctgaaggtgccgggctccatcacactgcccgtccagacattggtgtct
gcacgagctgccgccccaccccagccttcccctcctccaaccaagtttattgtaatgtcc
tcgtcctccagcgcctcatccacccaacaggtcctgtccctcagcacctcagcccccggc
tcaggctccaccactacctctcctgtcaccaccacggtccccagcgtgcagcccattgtc
aagctggtctccaccgccaccaccgcaccccccagcactgccccctctggtccgggcagt
gtccagaagtacattgtggtctcacttccccccacaggggagggcaaggggggccctgcc
tcccacccttctcccgtccctcccccatcatcttccccatccccccttgggggcagtgcc
ctctgtggggggaaacaggaagcgggggacagcccccctccagccccaggaactccaaag
gctaatggctcccagccttccggctcaggctcccctcagcctgctccatga
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