Entry |
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Name |
(RefSeq) exportin-1 isoform X2
|
KO |
|
Organism |
ocu Oryctolagus cuniculus (rabbit)
|
Pathway |
ocu03008 | Ribosome biogenesis in eukaryotes |
ocu05166 | Human T-cell leukemia virus 1 infection |
|
Brite |
KEGG Orthology (KO) [BR:ocu00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100343451
03008 Ribosome biogenesis in eukaryotes
100343451
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100343451
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100343451
05164 Influenza A
100343451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ocu03019]
100343451
03009 Ribosome biogenesis [BR:ocu03009]
100343451
03016 Transfer RNA biogenesis [BR:ocu03016]
100343451
03036 Chromosome and associated proteins [BR:ocu03036]
100343451
Messenger RNA biogenesis [BR:ocu03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100343451
Ribosome biogenesis [BR:ocu03009]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100343451
Pre-60S particles
100343451
Transfer RNA biogenesis [BR:ocu03016]
Eukaryotic type
tRNA transport factors
tRNA export factors
100343451
Chromosome and associated proteins [BR:ocu03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100343451
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
2:125076643..125126208
|
AA seq |
1071 aa
MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGTQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD |
NT seq |
3216 nt +upstreamnt +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagctcgccagctgcttgatttcagc
caaaaactggatatcaaccttttagacaatgtggtgaattgcttataccatggagaagga
gcccagcaaagaatggctcaagaagtactgacacacttaaaggagcatcctgatgcgtgg
acaagagtcgacacaattttggaattttcacagaatatgaacacgaaatattatggacta
caaattttggaaaacgtgataaaaacaaggtggaagattcttccgagaaaccagtgtgaa
ggaattaaaaaatatgttgttggcctcattatcaagacgtcatctgatccaacttgtgta
gagaaggaaaaggtgtatattggaaagttaaatatgattcttgttcagatactgaaacaa
gaatggcccaaacattggccaactttcatcagtgacattgttggagcaagtaggaccagt
gaaagtctttgtcagaataatatggtgatacttaagcttttgagtgaagaagtatttgat
ttctctagtggacagataactcaagtgaaagctaagcatttaaaagacagcatgtgcaat
gagttctcacagatatttcagctgtgtcagtttgtgatggaaaattctcaaaatgctcca
cttgtacatgcaaccttggaaacactgctcaggtttctgaactggattccactgggatat
atttttgagaccaagttaattagcacattaatttataagttcctgaatgttccaatgttt
cgaaatgtctctctgaagtgcctcaccgagattgctggtgtgagtgtaagccaatatgag
gaacaatttgtaacgctatttacactgacaatgatgcagctaaaacagatgcttccttta
aataccaatattcgactagcatattcaaatggaaaagatgacgaacagaactttattcaa
aacctcagtttgtttctctgcacctttcttaaggaacacggtcaacttatagaaaaaaga
ttaaatctcagggaaacactcatggaggctcttcattatatgttgctggtatcagaagta
gaagaaactgaaatctttaagatttgtcttgaatactggaatcacttggcagctgaactc
tatagagagagcccattttctacatctgcctctccattgctgtcaggaactcaacatttt
gatgttccccccaggagacagctctatctgccagtgttatccaaggtccgtttattgatg
gttagtcgtatggcgaaaccagaggaagtattggttgtagaaaatgatcagggagaagtt
gtgagagaattcatgaaggatacagattccataaatttgtataaaaatatgagagaaaca
ttagtttatcttactcatctggattatgtagatacagaaagaataatgactgaaaagctt
cacaatcaagtgaatgggacagagtggtcatggaaaaatttgaatacattgtgttgggca
ataggctccattagtggagccatgcatgaagaggatgaaaaacgatttcttgttactgtt
ataaaggatctattaggattatgtgaacagaaaagagggaaagataataaagctattatt
gcatcaaatatcatgtacatagtaggtcaatatccaagatttttgagagctcactggaaa
tttttgaagactgtagttaacaagctgtttgaattcatgcatgagacccatgatggagtc
caggacatggcttgtgatacttttattaaaatagctcagaagtgccgcaggcattttgtt
caagtccaggttggagaagtaatgccatttattgatgaaattttgaacaacattaacact
atcatttgtgatcttcagcctcaacaggttcatacattttatgaagctgtgggctacatg
attggtgcacaaacagaccagacagtccaagaacatctgattgaaaaatacatgctgctc
cccaatcaagtgtgggatagtataatccagcaggcaaccaaaaatgtggatatactgaaa
gatcctgaaacagtcaaacagcttggtagcatattgaagacaaatgtgagagcttgtaaa
gctgttggacacccttttgtaattcagcttggaagaatttacctagatatgcttaatgtg
tacaagtgcctcagtgaaaatatttctgcagctattcaggctaatggtgaaatggttaca
aagcaaccattgattagaagtatgcgaacagtaaaaagggaaacattaaagttgatatct
ggttgggtaagccggtccaatgatccacaaatggtagctgaaaattttgttcctcctctg
ttggatgcagttctcattgattatcagagaaatgtcccagctgctagagaaccagaagtg
cttagtaccatggccattattgtcaacaaattaggaggacatataacagctgaaatacct
caaatatttgatgctgtttttgaatgcacattgaatatgataaataaggactttgaagaa
tatcctgaacacagaacaaactttttcttactacttcaagctgtcaattctcattgtttc
ccagcatttctagctattccacctgcacagtttaagcttgttctggattccatcatttgg
gctttcaaacatactatgaggaatgttgcagatacaggcttacaaatactttttacactc
ttacaaaatgttgcacaagaagaagctgctgcccagagtttctatcagacttatttctgt
gatattcttcagcatatcttttctgttgtgacagacacctcacatactgctggtttaaca
atgcatgcatcaatacttgcatatatgtttaatttggttgaagaaggcaaaataagtaca
ccattaaatcctgggaacccagtgaacaaccagatgtttattcaggaatatgtggctaat
ctccttaaatctgcattccctcatttacaagatgctcaagtgaagctctttgtgacagga
cttttcagcttaaatcaggatattcctgctttcaaggaacatctaagggatttcttagta
cagataaaggaatttgcaggtgaggacacgtctgatctgtttttggaagaaagagaaaca
gctcttcgacaggctcaggaagagaaacataaacttcaaatgtctgtccctggcatcctt
aatccacatgaaattccggaagaaatgtgtgattaa |