Oryctolagus cuniculus (rabbit): 100343517
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Entry
100343517 CDS
T03373
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03030
DNA replication
ocu03410
Base excision repair
ocu03420
Nucleotide excision repair
ocu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100343517
03410 Base excision repair
100343517
03420 Nucleotide excision repair
100343517
03430 Mismatch repair
100343517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocu03032
]
100343517
03036 Chromosome and associated proteins [BR:
ocu03036
]
100343517
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100343517
DNA replication proteins [BR:
ocu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100343517
DNA Replication Termination Factors
ELG1-RFC complex
100343517
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100343517
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100343517
Check point factors
HRAD17(Rad24)-RFC complex
100343517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_16
AAA_14
Viral_helicase1
Mg_chelatase
RCF1-5-like_lid
AAA_24
AAA_11
Rad17
RuvB_N
AAA_assoc_2
nSTAND3
AAA_19
DNAX_ATPase_lid
MipZ
AAA_5
AAA_18
AAA_28
ABC_tran
AAA_25
AAA_30
AAA_23
NTPase_1
MeaB
SLFN-g3_helicase
DUF815
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
100343517
NCBI-ProteinID:
XP_008247305
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MGRGLGAAGSGRESMEVQENGAVQDAAPVASKASSSAGHYELPWVEKYRPVKLNEIVGNE
DTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGID
VVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNAS
DKIIEPIQSRCAVLRYTKLTDAQILARLLNVIEKEQVPHTDDGLEAIIFTAQGDMRQALN
NLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPED
IIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggggcggggcctcggggcggcgggaagcggacgcgagagtatggaggtgcaggagaat
ggtgcggtccaggacgctgcgcctgtcgccagcaaggcgtccagcagcgccggccactac
gagctgccgtgggtggagaagtacaggccggtgaagctgaatgaaattgtggggaatgaa
gacacggtgagcaggctggaggtctttgcccgagaagggaacgtgcccaacatcataatt
gctggccccccgggaacgggcaaaacgaccagcatcctgtgtttggcccgagcgctgctg
ggcccggcccttaaggatgctgttctggaactcaatgcctcgaatgacaggggcattgac
gtcgtgaggaataaaatcaagatgttcgcccagcagaaggtcaccctccccaagggccgg
cacaagatcatcatcctggacgaggccgacagcatgacggacggggcccagcaggctttg
aggaggaccatggagatctactccaagacgactcgctttgctctggcatgcaacgcttcg
gacaaaatcatagagcccatccagtcgcggtgcgccgtcctgcgctacaccaagctcacg
gacgcacagattctcgccaggctgctgaacgtcatcgagaaggagcaggtgccacacacg
gacgacggcctggaggccatcatcttcacggcgcagggcgacatgcggcaggcgctgaac
aacctgcagtccaccttctcggggttcggtttcatcaacagcgagaacgtgttcaaggtc
tgcgacgagccccaccccctgctggtcaaggagatgatccagcactgtgtgaatgccaac
atcgacgaagcctacaagattctcgcgcacctgtggcacctgggctactccccagaagac
atcattggcaacattttccgggtgtgtaaaaccttccagatggcggagtacttgaagctg
gagtttatcaaggaaatcggatacacgcacatgaaagtcgcagaaggcgtgaactctctg
ctgcagatggcggggctgctggccaggctgtgccagaagacaatggccccggtggccagt
tag
DBGET
integrated database retrieval system