Oryctolagus cuniculus (rabbit): 100343560
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Entry
100343560 CDS
T03373
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04622
RIG-I-like receptor signaling pathway
ocu05161
Hepatitis B
ocu05162
Measles
ocu05164
Influenza A
ocu05168
Herpes simplex virus 1 infection
ocu05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
100343560
05171 Coronavirus disease - COVID-19
100343560
05164 Influenza A
100343560
05162 Measles
100343560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ocu04054
]
100343560
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100343560
Pattern recognition receptors [BR:
ocu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100343560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
DUF3638
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100343560
NCBI-ProteinID:
XP_002712267
Ensembl:
ENSOCUG00000002863
UniProt:
G1SIH5
LinkDB
All DBs
Position
7:72074383..72131665
Genome browser
AA seq
1022 aa
AA seq
DB search
MSNGYSADKKFLYLLSCFRARVKMYIQVEPVLDHLTFLPADVREQIHRTADTSGNVQAVE
LLLSTLEKQIWPQGWAREFVEALKSAGSRLAARYLNPELADLPSPSFENTHDECFQLLNL
LQPTLVDSLLVRDVLDKCVEEDLLTTEDRNRISAAENNGNESGVRELLKRIVQKENWFST
FLDVLRQTGNDKLAQELTGTEFLESNAEAENVSQEDGPEVQELLYSTADQPSPEKEGWDM
ENNSSESSFADSSVVSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEDSAAVRR
SPEPELQLRSYQMEVAQPALEGKNIIICLPTGSGKTRVAVFIAKDHLDKKKKESNPGKVI
VLVNKVPLVEQLFRKEFKPFLKKWYRVIGLSGDTQLKISFPEVVKSHDVIISTAQILENS
LLNFENGEDAGVQLSDFSLLIIDECHHTNKEAVYNNIMRRYLKQKLKNNRLKKENKPVIA
LPQILGLTASPGVGGANKQAKAEEHILKICANLDAFTIKTVKENLDQLKDQMKEPCKKFA
IADDTREDPFKEKLLEIMTRIQTYCQMSPMSDFGTQHYEQWAIQMEKKAAKEGNRKDRVC
AEHLRKYNEALQINDTIRMIDAYNHLETFYNNEREKKLAVQEDASDESDNDDCGGNEDNF
NKPLEQDGTDRFLMALFFENKNMLKKLADNPEHENEKLIKLRNTIMEQYTRTEESARGII
FTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKI
NLLIATTVAEEGLDIKECNVIIRYGLVTNEIAMVQARGRARADESTYILVGCSGSGVVER
ETVNDFREKMMYTAIHRVQNMKPEEYEHKILELQMQSIMEMKMKIKRSIAKHYKENPSLI
TFLCKNCSVPACSGADIHVIEKMHHVNMTQEFKKLYIVRESKAQKKNFADYKTNGEIICK
CGQDWGTMMVHKGLDLPCLKIRNFVVVFKTNSAKKQYKKWVELPITFPDLDYSEYCLLSD
ED
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatggttattccgcagacaagaagttcctctatctcctctcatgcttccgggcc
agagtgaaaatgtacatccaggtggagcctgtcctggaccacctgacctttctgcctgca
gatgtgagggaacagatccacaggacagccgacacttctgggaatgtgcaagcagttgaa
ctgctcctgagcaccttggagaagcagatctggccccagggctgggctcgcgagtttgtg
gaggccctgaagagcgctggcagccgtttagcagcccgctacctgaatcctgagctcgcc
gacctgccctcgccatcattcgagaacactcatgatgaatgcttccaactgctgaacctc
ctgcagcccacgctggtagacagccttctagttcgagatgtcttagataaatgcgtggag
gaggacctgttgaccactgaagacagaaatcggatctctgctgcagaaaacaatgggaat
gagtcaggggtacgagaactactaaaaaggattgtgcagaaagaaaactggttttccaca
tttctggatgttctccgtcaaacaggaaatgataaacttgcgcaagagttaacaggcacc
gagttcttggagagcaatgcagaggctgaaaatgtatcacaagaagatggtcctgaagtt
caagagctgctttattcaaccgcagatcagccaagtccagagaaagagggatgggacatg
gagaacaattcatcagagtcatcctttgcagattcttctgtggtttcagaatcagacaca
agtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatg
ggcagtgattcaggcaccatgggaagtgattcagatgaagacagtgcagcagtaagaaga
tcccctgagccagagctgcagcttaggtcttaccaaatggaagttgcccagccagccttg
gaagggaagaacatcatcatctgccttcctacagggagtgggaaaacacgagtggctgtt
ttcattgccaaggatcacttggacaagaagaaaaaggaatctaatccaggaaaagttata
gttcttgtcaataaggtaccattagttgaacagctctttcgcaaagaattcaaaccgttt
ttgaagaaatggtatcgtgttattggattaagtggtgatacccaactgaaaatatcattt
ccagaagttgtcaaatctcatgatgttattatcagtacagcccaaattcttgaaaactcc
cttttgaattttgaaaatggagaagatgctggtgtccaattgtcagacttttccctcctt
atcattgatgaatgtcatcataccaacaaagaagcagtctacaataacattatgaggcgt
tatttgaaacagaagttgaaaaataatagactcaagaaagaaaacaagccagtgattgcc
ctacctcagattctgggactaacagcttcacctggtgttggaggagccaacaagcaagcc
aaagccgaagaacacattcttaaaatatgtgccaatcttgatgcatttaccattaaaacc
gtgaaagaaaatcttgatcagctcaaagaccaaatgaaggagccatgcaagaagtttgca
attgcagatgacacccgagaggatccatttaaagagaagcttctagaaataatgacaagg
attcaaacttattgccagatgagtccaatgtcagattttggaactcaacattatgaacaa
tgggccattcaaatggaaaaaaaagctgcaaaagaaggaaatcgcaaagaccgtgtgtgt
gcagaacacttgaggaagtacaatgaggccctgcaaattaatgacacaattcggatgatt
gatgcatataatcaccttgaaactttctataataatgagagagaaaagaaactcgcagtc
caagaagatgctagtgatgagagtgataatgatgattgtggtggcaatgaagataatttt
aacaaaccattggaacaggatgggacagatagatttcttatggcattattttttgaaaac
aaaaacatgttgaaaaaactagctgacaacccagaacatgaaaatgaaaagctgatcaaa
ttaagaaacaccataatggaacaatacacgagaactgaggaatcagcacgaggaataatt
ttcacaaaaacacggcagagtgcttatgccctttcccagtggattactgaaaatgaaaaa
tttgcagaagtaggcgttaaagcccaccatcttattggagctggtcacagcagtgagttc
aagcccatgacacagaatgaacaaaaagaagtcattagtaaatttcgcactggaaaaata
aatctgcttatagctaccacagtggcagaagaaggtctggatatcaaagaatgtaatgtc
attattcgttacggtctcgtcactaatgaaattgccatggtccaggcccgtggtcgagcc
agagctgatgagagcacctacatcctggttggctgcagtggctcaggagttgttgaacgt
gagacagtgaatgattttcgagagaagatgatgtatacagctatacatcgtgttcaaaat
atgaaaccagaggagtatgagcataagattttggaattacagatgcaaagtataatggaa
atgaaaatgaaaataaagagaagtatcgcaaagcattacaaggaaaatccatcgttaata
actttcctctgcaaaaactgcagtgtgccagcctgctctggggcagatatccatgtgatt
gagaagatgcatcatgtcaacatgacacaagaattcaagaaactctacattgtgagagaa
agcaaagcacaaaagaagaactttgctgactataaaacaaatggagagattatctgcaaa
tgtggccaagactggggcacgatgatggtacacaaaggcttagatttgccttgtctcaaa
ataaggaattttgtagtagttttcaaaactaattcagcaaagaaacaatacaaaaagtgg
gttgaattacctatcacatttcctgatcttgactactcagaatactgtctcttaagtgat
gaagattag
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