Oryctolagus cuniculus (rabbit): 100343596
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Entry
100343596 CDS
T03373
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocu00535
]
100343596
Proteoglycans [BR:
ocu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
100343596
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
DUF5928
Motif
Other DBs
NCBI-GeneID:
100343596
NCBI-ProteinID:
XP_051682989
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Position
X:26777266..26803854
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AA seq
493 aa
AA seq
DB search
MPQPGGSKPARRVTGRGMLVLLLHAVFLGLPCARAAEACTRACPAACTCSSVERGCAVRC
DRAGLLRVPAEFPCEAASIDLDRNGLRILGERAFGTLPSLRRLSLRHNNLSFITPGAFKG
LPRLAELRLAHNGDLRYLHARTFAALGRLRRLDLAACRLFSVPERLLAELPALRELAAFD
NLFRRVPGALRGLANLTHAHLERGRIEAVASSSLLGLRRLRSLSLQANRVRAVHAGAFGD
CGALEHLLLNDNLLAALPADAFRGLRRLRTLNLGGNALGLVARSWFADLVELELLYLDRN
SIAFVEEGAFQNLSGLLALHLNGNRLTVLAWAAFQPGFFLGRLFLFRNPWRCDCHLEWLR
DWMEGAGRVTDVPCASPGSVAGLDLSQVAFGRSSDGLCVDPEELNLTASSPGPSPEPVAA
TVSRFSSLLSKLLAPKGPVEEVANTTGGLVNASVPDNLPSRGVAGSGCGTTFLLASCLLL
AAAQHSVCDLQRN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgccacagccgggtggctctaagccagcaaggcgcgtgacaggcagagggatgctggtc
ctgcttctgcatgcggtgttcctcggcctgccctgcgcccgggccgcggaggcctgtact
cgcgcctgccccgccgcctgcacctgcagcagcgtggagcgaggttgcgccgtgcgctgc
gaccgcgcgggcctcctgcgggtgcccgccgagttcccgtgcgaggcggcctccatcgac
ctggaccgcaacggcctgcgcatcctgggcgagcgggccttcggcacgctgccgtcactg
cgccgcctgtcgctgcgccacaacaacctgtccttcatcacgcctggcgccttcaagggc
ctgccgcgcctggccgagctgcgcctggcgcacaacggcgacctgcgctacctgcacgcg
cgcaccttcgccgcgctcggccgcctgcgccgcctcgacctggccgcctgccgcctcttc
agcgtgcctgagcgcctcctggccgagctgcccgccctgcgcgagctcgccgccttcgac
aacctgttccgccgcgtgccgggcgcgctgcgcggcctggccaacctgacgcacgcgcac
ctggagcgcggccgcatcgaggcggtggcctccagctcgctgctgggcctgcggcgcctg
cgctcgctcagcctgcaggccaaccgcgtccgcgccgtgcacgccggcgccttcggggac
tgcggcgcgctggagcacctgcttctcaacgacaacctgctggccgcgctgccggccgac
gccttccgcggcctgcgccgtctgcgcacgctcaacctgggtggcaacgcgctgggcctg
gtggcgcgctcctggttcgccgacctggtcgagcttgagctgctctacctggaccgcaac
agcatcgccttcgtggaggagggcgccttccagaacctctcgggcctcctcgccctgcac
ctcaatggcaaccgcctcaccgtgctcgcctgggccgccttccagcccggcttcttcctg
ggccgcctcttcctcttccgcaacccgtggcgctgcgactgccacctggagtggctgcgg
gactggatggagggcgcagggcgcgtcaccgatgtaccgtgcgcgtccccgggctccgtg
gccggcctagacctcagccaggtggccttcggccgctcctccgatggcctttgtgtggac
cccgaggagctgaacctcaccgcgtccagcccgggcccgtccccagagccagtggctgcc
accgtgagcaggttcagcagcctcctctccaagctgctggccccgaaaggcccagtggag
gaggtggccaacaccacggggggtctggtcaatgcctccgtgcctgacaaccttccctcc
cgcggggtggcaggctcgggctgcgggaccacctttctcctcgcctcctgtctcctgctc
gccgcggcccagcactccgtgtgtgacttgcagaggaactga
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