Oryctolagus cuniculus (rabbit): 100343626
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Entry
100343626 CDS
T03373
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X5
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu05014
Amyotrophic lateral sclerosis
ocu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100343626
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100343626
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100343626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100343626
03036 Chromosome and associated proteins [BR:
ocu03036
]
100343626
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100343626
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100343626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
100343626
NCBI-ProteinID:
XP_002708582
Ensembl:
ENSOCUG00000017583
LinkDB
All DBs
Position
1:complement(158463146..158595149)
Genome browser
AA seq
1799 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFSYGQNKTAFGTSTTGFGTNPGGLFGQPNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSAGTAFGTGTSLFGQTNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTNSGGLFGFGTNTSGNSIFGSKPAPGTLGAGLGTGF
GTALGAGQASLFGNNQPKIGGPLGTGGFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGTAKSQLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVNRD
SEDLASPSEYPENGERFSFLSKPVDENHQDGDDDSLVSRFYTNPIAKPIPQTPESTGNKH
NNSNSVDDTIVALNMRVALRNGLEGSSEETSFHDESLQDDREETENNAYHMHPAGIVLTK
VGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKE
VIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSRK
QGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTAPLPPAGQTTPF
QTALNGKPAPPPQSQSPEVEQLGRVVELDSDMIDITQEPVLDSMLEESVPEDQEPVSAST
HIASSLGINPHVLQIMKASLLADEEDIDMMLDQRFSHVPSKADASQEICSPRLPISASHP
SKSRSLGGGLLQSKFTSGTFLSPSASVQEFHTPRASSLMNIPSTSPWSVPPPLTAVFTVP
SPAPEFQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMGRSFRIGWGPNWTLANSGE
QLSGSQELENHQVSESVEYGFLPNPVAVKSLTESPFKVHLEKLSLRQKKLDEDVQLYQTP
LELKLKHSTIHVDELCPLIVPNPGVAIIHDYAVWVKEASGDLLEVPIVKHWSLTWTLCEA
LWGHLKELDSQLDEPNEYIQILERRRAFSRWLSHTAAPQIEEEVSLTQKDNPVEAVFSYL
TGNRIGEACSLAQQTGDHRLALLLSQLVGSQSVRELLTMQLVDWHQLQADCFIQDERLRI
FALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTASISRALSMYEEAFQNTSE
GDRYACSPLPSYLEGSGCVVEEEQDSRRPLRDICFHILKLYSDRHYDLNQLLEPRSITAD
PLDYRLSWHLWEVLRALNYTHLSEQCEGVLQVSYAGQLESEGLWEWAIFVLLHIDNSSMR
EKAVRELLTRHCQLIETPESWAKETFLTQKLCVPAEWIHEAKAVRAHMESDKHLEALYLF
KAGHWNRCHKLVVRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIQ
VIEMLHRIQQVDFSSYELEQLHTKVTSLCNRIEQIQCYNAKDRLAQSDMAKCVANLLRVV
LSLQHTPDATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcatttggaacaccctttgggggtggcacaggtggatttggcacaact
tcaacatttgggcaaaatactggctttggtactactagtggaggagcatttggaacatct
gcatttggttctagcaacaatactggaggcctatttggaaactcacagaccaaaccagga
ggattatttggtaccaattcatttagccagccagctacctccacaagcaccggctttggg
tttggtacatcaacaggaacgtcaaatagcttgtttggaactgcaagcacagggaccagt
cttttctcatcccaaaacaatgcctttgcacaaaacaaaccaactggctttggcaatttt
ggaacaagtactagcagtgggggactgttcggaactacaaataccacctctaaccccttt
ggtagcacatctggctcactctttggcccaagtagttttacagctgctcctactggaact
actattaaatttaatcctccaactggcacagatactatggtcaaagctggagtaagcact
aacataagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtctcta
gaggaacttcgtttagaggattatcaggctaatcggaaaggcccacagaaccaagtagga
gcaggtaccacgactggcttgtttgggtcttctccagccacatccagtgccacgggactc
ttcagctcctccactactaattcaggcttttcatacggtcagaacaaaactgcctttgga
actagtacaactggatttgggacaaatccaggtggtctctttggccagcctaatcagcag
actaccagtctcttcagcaaaccgtttggtcaggccacaaccacccagaacactggtttt
tcctttggtaataccagcaccttaggacagccaagcaccaacaccatgggtttgtttgga
gtaactcaagcctcacagcctggaggtctttttgggacagctacgaataccagcgctgga
acagcatttggaacaggaacaagtctttttgggcagaccaatactgggtttggtgctgtt
ggttcgaccctgtttggcaataacaagcttaccacatttggaaccagcacaaccagtgct
ccttcatttggtacaaacagtggcgggctctttggttttggcacaaataccagcgggaat
agtatttttggaagtaaaccagcacctgggactctgggagctgggcttggtacaggattt
ggaacagctcttggtgctggacaggcatctttgtttggaaacaaccaacctaagatcgga
gggcctcttggtacaggaggctttggggcccctggatttaataccacgacagccactttg
ggctttggagccccccaggccccagtagctttgacagatccaaatgcttccgctgctcag
caggctgtactccagcagcacctcaatagtctaacatactctccatttggagactcccct
ctcttccggaatcctatgtcagaccctaagaagaaagaagagagattgaaaccaaccaat
ccagcagcccagaaggctcttactacacctactcattataaactgacaccccgtcctgcc
accagagtccggccaaaggctttacaaacaacaggaacggccaagtcacagctctttgat
gggctggatgatgatgaaccatctctagccaatggcgcattcatgcccaagaagagcatt
aagaagttggttttgaagaaccttaacaatagcaatctcttttctcctgttaatcgtgat
tcagaagatctggcttcaccatctgaatatccagaaaatggagagagatttagtttcctt
agcaaacctgtggatgagaaccatcaggatggtgatgatgattcacttgtatcacgtttt
tataccaacccgattgcaaaacctattcctcaaaccccagagagtactggaaataaacac
aacaacagtaacagtgtggatgatacaattgttgctttaaacatgcgtgttgctttgcga
aatggactagaaggaagcagtgaagaaacttctttccatgatgagtcattacaggatgat
cgtgaagaaacagaaaataatgcttaccatatgcacccagcaggcattgttctcactaaa
gttggttactatactattccatctatggatgaccttgctaaaattaccaatgaaaaagga
gagtgcatcgtctctgatttcactattggtcgtaaaggttatggttcaatctattttgaa
ggagatgtgaatttaacaaatctaaatttggatgatattgtgcatatccgaaggaaagaa
gttattgtctacctagatgataaccagaagccacctgtgggtgaagggctaaacagaaag
gctgaagtgacattggatggagtttggccgacagacaaaacatctcgttgtttaataaag
agtccagatcgacttgctgatatcaactatgagggaagattagaagcagtttcaaggaaa
caaggagctcagttcaaagagtatcggcctgaaactggttcttgggtgtttaaggtctcc
catttttctaagtatggtcttcaagattctgatgaagaagaagaggaacgtccatccaag
actagtaccaagaagttgaagactgcccctttgccccctgcagggcagactacccctttc
cagacggctcttaatggcaaacctgcacctccaccccagagtcagagtccagaggtggaa
cagttagggagggttgtggaactggacagtgacatgatagatatcacccaggagccagtt
ttggattccatgttagaagagagcgtgcctgaagatcaggaacctgtgtctgcttccacg
cacattgcatcttcactgggaattaatccacatgttttacagatcatgaaagcatcactg
cttgctgatgaagaagatatagacatgatgctggatcagcgcttcagtcatgttccttcc
aaagcagatgcttctcaagaaatctgttctcccagactccccatttcagcatcccaccca
tcaaaatctcgttcactaggtggtggattactgcaatcaaaatttacaagtggaactttt
ctttcaccaagtgcctctgtgcaagaatttcacactcccagagcatcatctttaatgaat
atcccgtccacatccccttggtctgtccctccacccctgactgctgtgtttacagtgccc
agcccagcccctgaatttcaattgaaaacagtgggcacacgcagacaacctggcctagtc
cctcttgagaagtcggtcacttatggcaaggggaaactcttgatggacatggctctattt
atgggacgctcatttagaattggatggggtcccaactggactcttgctaatagtggagaa
cagctgagtggctctcaagaactggaaaatcatcaagtttctgaatctgtggaatatgga
tttctacccaatccagtagctgttaaatctctaactgagtctccattcaaagttcatttg
gaaaaactcagtttgagacaaaagaagctggatgaagacgtgcaattataccagacacct
ctggagctcaaattaaaacatagcacaatccatgtggatgagctgtgtcctctcattgtc
cccaatccaggagttgctatcattcatgactatgcagtttgggttaaggaagcatcagga
gacttattggaagtaccaattgtaaagcactggagcctaacgtggacactatgtgaagcc
ctttggggtcatctgaaggagctcgacagccagctggatgagcccaatgaatacattcaa
attctggagcgacgaagagctttctcccgctggctgtcccatacagctgcacctcaaatt
gaagaagaagtctccttaacgcaaaaagacaaccctgtggaagctgtgtttagctacctc
acaggcaataggatcggtgaggcctgttctctggcccagcagacaggtgatcatcgcctt
gcccttctgttatctcagttggtggggagccagtccgtccgggagctgctcactatgcag
ctggtggattggcatcaactccaggctgactgcttcatccaggatgagagactgcgcata
tttgccctgttagctggaaaaccggtatggcagctctcagaacagaagcaaatcaacgtg
tgttcccagctagattggaaacgctccctggctgtccatctgtggtatttgcttccacca
acagcttccatttccagggcactcagcatgtatgaagaagcatttcagaatacctctgag
ggtgacagatatgcctgttccccacttccttcatacctggagggctctggctgtgtggta
gaggaggaacaagactcacggagaccacttcgggacatctgctttcacattctaaagctg
tacagtgacagacattatgatctcaaccagctgttggaacctcgaagcataacagcagat
cctttggactaccgcctaagctggcatttgtgggaggttctacgggctcttaactacacc
catctctcagagcagtgtgagggtgtgctgcaggtcagttatgcaggccaactggaaagc
gagggactctgggagtgggccatctttgtcctcctccacattgacaactcaagcatgcgt
gagaaggctgtccgagagctgcttacccggcactgccagctaatagagacccctgagtct
tgggctaaggagactttccttacccagaagctttgtgtacctgctgagtggattcacgag
gccaaagcagtgagagcacacatggaatctgacaagcacttggaggccctttatttattt
aaagctggccactggaaccgctgccacaaacttgtcgtccgacacttagcttctgatgcc
atcattaatgagaactatgactacctgaaaggattcttggaagatctggcacctccagaa
cgcagcagcctaattcaggactgggaaacttctgggcttgtttacctggactatattcag
gttattgaaatgctccaccgtatacaacaggtggatttctcgagttatgagctggagcag
ttacacaccaaagtcacttcactgtgcaatcggatagagcagattcagtgttacaatgcc
aaggatcgcctggctcagtcagacatggccaagtgtgtcgccaatttgctgcgggtggta
ctgagcctgcagcacacccctgatgccacctctgattcaacgccagaccctcagcgagtt
cctttgcgcctgttggctccccacattggccgcctccccatgcctgaagactatgccttg
gaggaactgcgcagcctcacacagtcctatctgcgagaactgactgttgggagccagtga
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integrated database retrieval system
