Oryctolagus cuniculus (rabbit): 100343652 Help Entry 100343652         CDS       T03373                                  Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism ocu  Oryctolagus cuniculus (rabbit) Brite KEGG Orthology (KO) [BR:ocu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ocu03037]     100343652 Cilium and associated proteins [BR:ocu03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    100343652 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N Arm_2 Motif Other DBs NCBI-GeneID:  100343652 NCBI-ProteinID:  XP_008259681 Ensembl:  ENSOCUG00000001384 LinkDB All DBs Position 9:5872911..6097338 Genome browser AA seq 2228 aa AA seqDB search MVLTGLIRKLGHQLAEIRERALRSILCKVEHGLVGYADLVHERLLFLHLLEWFNFPAVPL RAEVLSLLGRLVEFPAAVQHLVDLGAVEFLSTLRPHVEPSLQAEIDGILDGLFSLPAEAP ALCAAAYQTNDTEMSQQPVTLTGYFPQDKSNFQQMEGPSRPIVNQNVKCLKFSTFPWLPL TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLA FGGDGKHRLALQSVSCLQQLCVYLRNRLNFHRDPGFFCSKQDTVSQNSSLSYGHEARGTH HSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGGSSHAHINSRISVHSPLDAGHI DLPELETEDTLELRFQQLSLPQFCISILESALPLLRTGSRQMIIRVLELLADDMILIGEA ISSDIWDDSSLFAIDMKEKLLLILGSLGETICYHKSSVSVEQPEAMLVHHRMAFVSTALF AVRLLQMLLPVEKASEFLPEPMSAALFLLSLDMPVSLEYPNIHEAVVAYLEQLNSENYSI YKRTAEAVYSIECTCNFLSEVGKEGEKNLLELVELADQALRSFSYHQHFPLIKEIICICS KIWKSAQASPLLQGESQKVFLRMLSHPVPQVKVETYHCCLEIVKECLGVHNVTKPVSSLC NGINFLLHPKVLYEISAFGIQEPKNEVSAAAKAILLYLLQGRLMMTALTWNKFIESLCPV IPVLQGYADTEDPLGNCILLLSKAGPEAGQEILPCTTRLKSMLRLLLVKKPSVRSLALKL LAFHLTNEEGADTKRPLIDARVLSRVTNLFIVKKPIELKLDDRRELVIKLETVERVYEIF TSDDVDLLLRKSAAEQLAVIMQDIKMHAVVKKLCLIDKIIEYLNECVGQHGKVVECLTQP CLTLLRKVLCADPVVRVSLSQQSSLLILLFRVSLIFHEDCTVVTEVGALFCLLLFDEVSR MDMWSVDPSSKPTLSSVFSLPVSVFRRYHLPVYVVGHHAVSPYSIVLPLSADCLALKPVT DMLRIAWNLSWYHGSDNLLKQMNSETKIHEFLDALKLSTEDTLILKITHMASGLQDCLHS IVQAASHRDVRAAVARMSFYLLNDRLSLKGGTGPCGLTLKSMAWHTALNRFLQVLPASTE DEKLLIDIIHFLNKLMKEQRRNLSVELLNWILELFLRHSSAPLLDLLVLTESQAREETDD IRAAVRQQLQKELIALFNTLLLSFMAVTDRKCSELFYVFQTQLALKLLQCLRVTNAPHFY GLPSLERTLRGMAQLTAFPGWSSHSPLTKPLEICVKYLSGLLEVITSFYVERGGNAMSFM GKGVTKSTVLCLLHLSHEMMAQAQSSEWMSLWFLPLGSHCEEHAAAAAQRGLTWLIPLWV DRDPEVRFTSLALGAALTTLDTGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAA FILQNLLVIPMPTEIIKDSTWQGPSVHDEDSGLSLTGKPALQALLYHCHFYEHVNQMIKH CYLGQYVFDSNFPAFDGTSEGSDPNGLDDSLKFWMASSRMSSQDRDPSSLSTSETMVAPS LGSAEFQPLSPSTALLPEPSHDQFVAQGQHETASPRPPRDSSFSAPLPKQCVFVTPSLLS AMCSLLDNLLAIAPGDTANAFRQAHLIELLCSIADATLIETCVQDLKTPLPSSPPVEHTQ AQVFFLLEYLSSLSRLLQSCLLVDPNLVIQDKILKPLITNAVGVLTICTKDVELIPTLHY TWTQLFNLLATLLRKAGAVCLPSVTMALAKNWAAVLDMFCKCVDLSLTSPTLYTAGLQFL SILLTEEAKRHLQDKGKRSSSPSPTITSLLDTTQENLKRLERFNEVILQCYEGKSSNDVL KRVAANALMSLLAVSRRAQEHALKANLIENCMEQMKHIHAQLNLDSLRPGKAALKKKEDA FIKELSITMQLLRNCLYQNEECKEAALGAHLVPVLHSLWPWLLMDDSLIQIALQLLCVYT ANFPNGCSSLCWSSYGQHPVQAAHRGAPSSSLMLCILKLASQVPLENTTVQQMVFMFLSN LALSHDCKGVIQKSNFLQNFLSLTLPKGGNKHLSNLTVLWLKLLLNMSSGEDGQQMILRL DGCLDLLTEMSQYKHKSSPYIPLLIFHNICFSPANKPKILANEKVITVLAACLESENQNA QRIGAAALWALIYNYQKAKTTLRNPSIKRRVDEAYSLAKKAFSNSEENSLNAYYLKCLEN LVQHLNSS NT seq 6687 nt NT seq  +upstreamnt  +downstreamnt atggtgttgaccgggctcatcaggaaactcggtcaccagctggcggagatccgggagcgc gcgctgcggagcatcctgtgcaaggtggagcacggcctggtcggctacgcggacctcgtt cacgagcggctgctcttcctgcacctgctggagtggttcaacttccccgccgtgccgctg cgggccgaggtgctcagcttgctcggcaggctggtggagtttccggctgcggtccagcat ctggtcgacctcggcgcagtggagttcctgtccacgcttcgtcctcatgtggagcccagt ctacaggctgaaatcgatggcattctggatgggctttttagtcttcccgcggaagctcct gcgctgtgtgctgccgcttaccaaaccaatgacactgaaatgtcacaacagcctgtaacc ttaacaggatattttccccaagacaaaagtaatttccagcagatggaagggccttcacga ccaatagtgaatcagaatgtgaagtgtttgaagttttctacttttccttggctacccctc accacaacagatagacatgttctctcctctaatgaaagctctttgagaagtagtaaccac actttaatatggaacacttgtgaattattgaaggatgttatcatgcaagattttcctgct gagattttccttcaaaggccaaaaattgttcagagccttttgtctctgttgaaactggcc tttggaggcgatggaaagcatcgtctggcattgcagtcggtgtcctgcttgcagcagctg tgtgtgtatttaagaaacagactcaactttcaccgagatccaggttttttctgtagtaaa caagacacagtttcccagaattcttctttgtcttatggtcatgaagcacgaggtactcat cattcccagaatccctccccagggagcagcagccctcggccctccgtggttgggcgtaca ggccagcgacccagaggagatggccaggactgggatgctgtgtcttccagtggcggtagt agtcatgctcacataaactccaggatatctgtccattcacctttggatgcgggacacata gatctgccagagctggaaactgaggacacgttggaattacgattccagcagcttagtctt ccccagttctgcatctccattctggaatcagcacttcctctcttaagaacaggtagtaga cagatgataattagagttctggaattgcttgcagatgatatgatacttattggtgaagca atttcatcagatatctgggatgacagcagcctttttgctatagatatgaaagagaagctg ctcctgattttgggatctcttggagaaacaatatgctaccataaaagcagtgtcagtgtg gaacaaccagaggcaatgctggtgcaccacagaatggcctttgtcagcactgcactgttt gcagtccgcctgttgcaaatgcttctccctgttgaaaaggccagtgagtttttaccagag ccgatgtcagcggcgttgtttcttctttctttggacatgcctgtttctttggagtatcca aatattcatgaagctgttgtggcctatttggaacagctgaattctgaaaactacagtatt tacaaacgaactgcagaggctgtttattcaatcgaatgtacttgtaatttcctgtctgag gttgggaaggagggagagaagaatctcttggaattagtggagctggcagaccaagccttg cgtagcttttcctatcatcagcatttccccctgataaaggaaatcatctgcatttgttca aagatctggaagtctgcacaggccagtccattattacaaggagaaagtcaaaaggtgttc ctacgtatgttgtctcacccggtgccacaagtgaaagttgagacttaccactgctgtctg gaaattgttaaggaatgtttaggtgtccataatgtcactaaacctgtgtcttcgctttgt aatggaattaattttctacttcatccaaaagttctatatgaaatctctgcatttggcata caagaacccaaaaatgaggtgagtgcggctgccaaggccatcctgttgtatctgcttcag ggacgactgatgatgacagcactgacttggaacaagtttattgagtctctctgtcctgtc attccagtactacagggctatgccgacacagaagaccctttgggtaactgcattctcctg ctaagcaaagcgggtcctgaggcagggcaggagattctcccttgtactactcgattaaag tccatgctgcggcttctgcttgtgaaaaaaccatcagttcgttcactagcattaaagctt ttagcatttcatcttacaaatgaagaaggggctgacacaaagcgccctttaatagatgcc agagttctctccagagttactaatttatttattgtgaaaaaacctattgaactcaaattg gatgacagaagagaactggttattaagttggagacagttgaaagggtttatgaaattttc acctcagatgatgttgatcttcttttgagaaagtcagctgctgaacagttagctgtgatt atgcaagatattaaaatgcatgctgtggtgaaaaagttatgcttaattgacaagataatt gaatacttaaatgaatgtgtgggtcagcatggtaaggtggtagagtgcttgacccagcca tgcctcacgctcttgaggaaggttctatgtgctgatccagttgtgcgtgtttccctctcg caacagtcttctctcttgatcctgttattcagagtttccttgatatttcatgaagactgt actgttgtgactgaagttggcgcattgttttgtcttctgttatttgatgaggtatcaaga atggatatgtggtctgtagatccttccagtaaacctactttgtcatcagtcttcagtttg cctgtttcagtttttagaaggtatcatctaccagtatatgtcgttgggcatcatgctgtg agtccttactcaatagttttgccattgtctgctgattgtttggccttgaaacctgtgaca gacatgctgagaatagcttggaacctgtcatggtatcatgggagtgataatcttttgaag cagatgaactctgaaacaaaaatccatgaatttttagatgcattgaagttatccacagag gacacccttattctgaagataacacacatggccagcgggctgcaggactgtctccattcc atcgttcaggctgcatcccacagggatgtcagggctgctgttgctaggatgagcttttat cttctgaatgacagattgtctttaaagggtggcactggcccatgtgggctcaccttgaag tccatggcttggcacactgcactaaacaggtttttacaagtgcttcctgctagtactgaa gatgagaaactgctaatagacatcatacattttttaaataagctaatgaaggaacagaga agaaatctatcagtagagcttctaaattggattctggaattatttcttagacatagttca gccccactgttagacctgctggtgctgacggagtcgcaggcacgagaagaaacagatgat atacgcgctgctgtcaggcaacagctgcagaaggaactgattgctcttttcaataccctg ctcctcagcttcatggctgtcactgacaggaaatgctcagaacttttttacgttttccaa acgcaactggctctgaaattgctccagtgtctgagagtcacgaatgctcctcatttctat ggcctgccttcccttgagcgcacattacgagggatggctcaactcacagcgtttccaggg tggagctcacattctccccttacaaagccccttgaaatttgtgtgaagtacttgtcaggt ctcctggaggttattacttctttttatgtggaacgtggaggaaatgccatgtctttcatg ggaaaaggtgttacaaagagcacagttctttgcttgcttcacttatcccatgagatgatg gcccaggcgcagagttcggagtggatgtcgctttggttcctgcctttaggtagtcactgt gaagagcatgctgctgctgctgctcagcgaggcttgacttggttgattccactgtgggtt gaccgggatccagaggtgaggttcacttccctggcattaggagcagctctgaccaccctt gacactggctgtgtggccttggcaaacagctgtcagaacatttctggtgggctctgggga actgtagtgaacattcttctggaccagtcagaatgtagcatggtgcgtcgggaggctgca tttattcttcagaatctccttgtaattccaatgcctacagaaattataaaggattctact tggcagggcccctccgtgcatgatgaagactctggcctgtcactcacaggaaaacctgcc cttcaggcgcttttgtatcactgccatttctatgagcatgtgaatcagatgataaaacat tgttatctaggacaatacgtatttgattcaaatttccctgcttttgatggaacttcagaa ggcagtgatccaaatgggttagatgactcattgaagttttggatggcttcatctaggatg tccagtcaagatcgtgatcccagttctctgtccacctcggaaacaatggtggcaccctca ttggggagtgctgaatttcaaccactttcgccatcaacagcgcttctgcctgaaccttcc catgaccagtttgtggctcaaggtcagcatgagactgcatcaccacgacctcctcgtgat tcctccttttctgctcccctccccaaacagtgtgtttttgttactccatctcttctgtct gccatgtgcagcctcttagacaacctcttggcgattgccccaggagacactgcaaatgcc tttcgacaggcccacctcatagagctgctctgtagcattgctgatgctaccctcattgag acgtgtgttcaggacctcaagaccccattgccttcgtctcctccagttgagcacactcaa gctcaggttttctttctcctggaatatctgtcctctttgtccagacttctgcagtcatgt ttgttggtagatcccaaccttgtgattcaggacaagattctgaaacctctcatcactaat gctgttggcgttcttaccatatgcaccaaagatgtagagcttataccgactcttcattat acgtggacacagctgtttaaccttctggccacacttctgaggaaagctggtgctgtctgt ctcccttctgtcaccatggctttggctaagaactgggcggccgtgcttgatatgttctgc aaatgtgtggacttgtctctcacaagccctactctatatactgctggcctgcagttcctt tctattcttttaactgaagaagcaaaacgacatctccaggataagggtaaaagaagttca tcccccagtccaacaatcacctcacttcttgatacaactcaggaaaatctgaaacgtcta gaacgatttaatgaagtaattcttcagtgctatgaaggaaaatcctccaacgatgtccta aaaagagttgctgcaaatgcactgatgtcacttctggcagtcagtagaagagcacaggaa catgctttgaaagctaatctcatagagaactgcatggagcagatgaagcacattcatgca caactgaacctagattctctgaggcctggaaaagcagcactgaaaaaaaaggaggatgct tttattaaagaattgagcattaccatgcagctcctaagaaactgtctttaccaaaatgaa gaatgtaaagaagcagctctcggtgctcaccttgtccctgtcttgcactctctctggcct tggcttttgatggatgattcactgatacaaattgccttgcagctactttgtgtctatact gcaaattttccaaatggttgcagctctctctgttggtcaagttacggacagcaccctgtt caggctgcacacagaggagcccccagcagctctctgatgctgtgcatcctaaagctggct tcccaggtgcctctcgagaacaccacagttcagcagatggttttcatgtttctttcaaac ctggccttgtctcatgactgcaaaggagtcattcagaagagtaacttcctacagaacttt ctctccctaacattgccaaaaggaggaaataaacatctcagcaatctgactgttctctgg ctgaagcttctcctgaatatgtcgtctggagaggatggacagcagatgatcctgaggctt gacggctgtttagacttgctgactgaaatgagccagtacaagcacaagagcagtccttat ataccgcttctcatctttcacaatatttgctttagtcctgctaataagcccaagatcctg gctaatgaaaaagtcattactgtgctagctgcctgtctggaaagtgagaatcaaaatgct cagaggattggagcagctgcgctttgggctctaatttacaattatcagaaggcaaaaaca actttgaggaatccatcaataaaaagaagagtggatgaagcatattctttagcaaagaaa gctttctcaaactcagaagaaaactcactaaatgcctattatttgaaatgtcttgaaaac cttgtgcaacaccttaactcttcctaa

DBGET integrated database retrieval system