Oryctolagus cuniculus (rabbit): 100343712
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Entry
100343712 CDS
T03373
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03082
ATP-dependent chromatin remodeling
ocu04714
Thermogenesis
ocu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100343712
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100343712
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100343712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100343712
03036 Chromosome and associated proteins [BR:
ocu03036
]
100343712
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100343712
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100343712
PBAF complex
100343712
GBAF(ncBAF) complex
100343712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
100343712
NCBI-ProteinID:
XP_051688729
Ensembl:
ENSOCUG00000017375
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPDIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKSVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSEEPE
RIGPEESGTDEARAEGQATDEKKEPKEPREGGGAGEEEAKEKTSEAPKKDEEKGKEGDSE
REPEKSDADSMADPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALA
AAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQL
LADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPTLPPGSQPIPPTGAAGPPAVHGLA
VAPASVAPAPAGSGVPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG
PSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADPISI
NLPPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAA
QSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactataagaagtatatccaa
gctgaaccacccaccaacaagtcgctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcgccactcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggaggcgttacgatttccagaacccatcacgcatggaccgcaat
gtggaaatgtttatgaccattgagaagtccttggtgcagaataactgcctgtctcgacct
aacatttttctctgcccagatattgagcccaaactgctagggaagttaaaggacattatc
aagagacaccagggaacagtcactgaggataagaacaatgcctcccacgttgtgtatcct
gtcccagggaacctcgaagaagaggaatgggtacggccagtcatgaagagggataagcag
gttcttctgcactggggctactaccctgacagttacgacacctggatcccggcaagtgaa
attgaagcatctgtggaagacgcaccaactcccgagaaacctagaaaggttcatgcaaag
tggatcctggacacagacaccttcaatgagtggatgaatgaggaagactatgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagctaagacactgacagacgag
gtgaacagcccggattcagatcgtcgagacaagaagggagggaactataagaagaggaag
cgttccccttctccttcaccaaccccagaagctaagaagaaaaacgctaagaaaggccct
tcaacaccttacaccaagtcaaagcgtggccacagagaggaggagcaagaagacctgaca
aaggacatggatgagccctcaccagtccccaatgtagaagaggtgacactgcccaaaaca
gtgaacactaagaaggactcggagtcagctcccgtcaaaggaggcaccatgaccgacctg
gatgaacaggaggatgagagcatggagaccacgggcaaggatgaggacgagaacagcacg
gggaacaagggggagcagaccaagaatccagacctgcatgaggacaacgtgactgagcag
acacaccacatcatcattcccagctatgctgcctggtttgactacaacagtgtgcatgcc
attgagaggagggctctccccgagttcttcaacggcaagaacaagtccaagaccccagag
atctacctggcctaccgaaacttcatgattgacacttaccgacttaacccccaagagtac
ctcacctccactgcctgccgccggaacctggccggggacgtctgtgccatcatgagggtc
catgccttcctcgagcagtggggtcttattaactaccaggtggatgccgagagccgacca
acccccatggggcctccgcccacctctcacttccatgtcttggccgacacaccgtcgggg
ctggtgcctctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccaacaaatgctcaactttcctgacaaaggcaaagagaaacca
acagacatgcagaacttcgggctgcgcacagacatgtacacgaagaagagcgtcccctcc
aagagcaaagccgcagccagtgccactcgagagtggacagaacaggagaccctgctactc
ctcgaggcactggaaatgtacaaagatgactggaacaaagtatctgagcacgtgggaagc
cggacacaggatgagtgcatcttgcatttccttcgtcttcccattgaagacccctacctg
gaggactcggaggcctccctgggccccctggcctaccagcccatccccttcagtcagtcg
ggcaaccctgtcatgagcactgttgccttcctggcctctgtcgtcgatccccgcgtcgcg
tctgctgctgcaaagtctgccctagaggagttctccaaaatgaaggaagaggtgcccaca
gccttggtggaagcccacgttcggaaagtggaggaagcagccaaagtgacaggcaaggcc
gacccagcctttggcctggaaagcagcggcatcgcaggaaccacctctgaggagcctgag
cggatcggcccagaggagagcgggactgacgaagcccgggcggagggccaggccacagat
gagaagaaggagcctaaggagccccgggaaggaggaggggctggagaggaggaggccaag
gagaaaactagcgaggcccccaagaaggatgaggagaaagggaaagaaggcgacagcgag
agggaaccggagaagagtgatgctgactcaatggctgatcccgagaaggagaaggagcca
aaggaagggcaggaggaagtgctgaaggaggtggtggagtcggagggggaaaggaagacg
aaggtggagcgggacattggggagggcaacctctccaccgccgctgccgctgccctggct
gccgccgctgtgaaagccaagcacttagctgccgtcgaagaaaggaagatcaagtctttg
gtggctctgctggtggaaactcagatgaaaaagttggagatcaaactccggcacttcgag
gagctagagacgatcatggaccgggagcgagaagcactggagtatcagaggcagcagctc
ctggccgacagacaagccttccacatggagcagctaaagtacgcggagatgagggcccgg
cagcagcacttccaacagatgcaccaacagcagcagcagccaccgccaaccctgccccca
ggttcccagcctatcccccctacaggggctgctgggccacccgcagtccatggcttggcc
gtggctccagcctctgtggcccctgctcctgctggcagtggggtccctcctggaagcttg
ggcccttctgaacagattgggcaggcagggtcaacggcagggccacagcagcagcaacca
gctggagccccccagcctggggcagtcccaccaggggtacccccccctggaccccatggc
ccctcaccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggc
agcgggcacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcct
cctcctcctcctgctccatccatcatcccatttggtagtctagccgaccccatcagtatt
aaccttccccctcctcctaacctgcatgggcatcaccaccatctcccgttcgccccgggc
actctccccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccg
gcgaccaccaccatgccatcctccttgcctctcgggccggggctcggatccgccgcagcc
cagagccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactg
ccagacccaggcacccctctgcctccagaccccacagccccgagcccaggcacagtcacc
cctgtgccacctccacagtga
DBGET
integrated database retrieval system
