Oryctolagus cuniculus (rabbit): 100343716
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Entry
100343716 CDS
T03373
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100343716
03037 Cilium and associated proteins [BR:
ocu03037
]
100343716
Transporters [BR:
ocu02000
]
Other transporters
Pores ion channels [TC:
1
]
100343716
Cilium and associated proteins [BR:
ocu03037
]
Other cilia and associated proteins
Stereociliary proteins
100343716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
100343716
NCBI-ProteinID:
XP_051703427
Ensembl:
ENSOCUG00000003590
LinkDB
All DBs
Position
6:complement(8709401..8793075)
Genome browser
AA seq
957 aa
AA seq
DB search
MSSFYRNKGYVETPAYSGHSGSQNYTRGYSSTQDYPDFPDPLNNPDYPSASSSPSSAGSR
TSPDYLLSLPEPDYSDSQSSPYHRDSSRDLDYRGSQRNPEFAGSRSNGNYEGSRTSPDYL
VSLGEPDYPGAQGTFDSPIPRANSNLLGSRKNLQYAGSRVNPSTRSLGQPDYPGAENQPG
SSHFLGKPDYLVAENFQNSPAFWGNPDYPGAEDGQDYGSSDTLEVTRRSSGPLGVLGGDH
EDYPENIEMTSMRVANPYGPSLPGAPGNGYVNPAFGGEGSPIPAYGNPPLTESHWYKSPQ
GQKLIASLIPMTSRDRIKTIRNQPRTMEEKRNLRKIVDKEKSKQSHRALEFNCCAQCLSS
LSLGYRRAKSNVSELLNSVSLWQKTLKVIGGKFGTSVLSYFNFLRWLLKFNIFSFILNFS
FITIPQFTVAEKNTLQFTGLELLTGAGYFRDTVLYYGYYTNSTIQHEHSGVAYNMQLAYI
FTIGACLITCFFSLLFSMAKYFRNNFINPHIYSRGIAKLIFCWDFTVTHEKAVKLKQKNL
STEIRENLSEIRQENARLTFHQQLTRFSAHVVAWVVSTGVAVACCVAVYYLAEYNSEFLK
KHRDPWAVLLLPFVVSCINLVVPRFYSMFRLVERYEMPRHEVYTLLIRNIFLKMSIIGIL
CYYWLNIVALSGEECWETLIGQEIYRLLLMDFLFSLADSLLGEFLRRIIGMRFITSLGLQ
EFDIARNVLELIYAQTLVWIGIFFCPLLPFIQMITLFIMFYVKNISLMMNFQPPSKAWRA
SQMMTFFIFLLFFPSFTGVLCTLAITIWRLKPSADCGPFRGLPFFIHSIYSWIDTLSRRP
GYLWVVWIYQNLIGSVHFFFILTLIVLIITYLYWQITEGRKIMIRLLHEQIINEGKDKMF
LIDKLIKLQDAEKRANPSSLVLERREVEQQGSLHFGERQSTPDLRYRRSVQEDSTKA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccttctacaggaataaaggctatgtggaaactccagcttattctggccactca
ggctctcagaactacacgagggggtattcgagcactcaggattatccggattttccagat
cctctgaataatccagactaccccagtgccagcagtagtccgtcctctgcaggttctaga
acaagtccagactatcttctgtctctgccagagccagattacagtgactctcagagcagt
ccataccaccgcgactcatccagagatttggactaccgtggatctcaacggaatcctgag
tttgcaggttccagaagcaacgggaactatgaaggctctagaacaagtccagattatctt
gtctccttgggagaaccagactaccctggagcccagggcacctttgactcacccatcccc
agagccaattccaaccttctaggatccagaaagaatttgcaatatgctggttccagagtc
aacccatccacgcgatctctgggacagcctgattacccaggtgctgagaatcaacccggc
tcctcacactttttagggaagccagactatcttgttgctgagaactttcagaactctccc
gccttttgggggaaccctgattacccaggtgctgaggatggtcaggattatggctcttct
gataccctggaagtgaccagaaggagcagtggccccttgggcgttcttggtggagaccat
gaagattaccctgaaaacattgaaatgacatccatgagagtggcaaatccttacggcccc
tccctgccaggtgctcctggaaatggctatgtgaatcctgcttttgggggtgaaggtagc
cctatccctgcttatggaaacccaccgttgactgaaagtcactggtacaagtcaccccaa
ggacagaagttaattgcatctctgatccccatgacatccagagacagaattaaaaccatc
aggaaccaaccgcggaccatggaagagaagaggaacctcaggaaaatagtggacaaagag
aagagcaagcagtcccatcgtgccctggaattcaactgctgtgcccagtgcctgagctcc
ctctcactgggctaccggagagccaagagcaacgtgtcggagctcctcaactccgtgagc
ctgtggcagaagacactcaaggtcatcgggggcaaatttggaaccagcgtcctgtcctat
ttcaactttctgaggtggctcctgaagttcaacattttctcgttcatcttgaacttcagc
ttcatcacgatccctcagttcaccgtggcggagaagaacaccctccagttcactgggctg
gagcttctcacaggggcgggttattttcgggacaccgtgctgtactacggctactacacc
aactccacgatccagcacgagcacagtggggtcgcctacaacatgcagctggcgtacatc
ttcaccatcggagcctgtttgatcacctgcttcttcagtttgctcttcagcatggccaag
tatttccggaacaacttcatcaacccccacatttactccagaggcattgctaagctcatc
ttctgctgggacttcaccgtcacccatgagaaggccgtgaagctgaagcagaagaatctc
agcacggagatccgggagaacctgtctgagatccgtcaggagaacgccaggttaacgttt
catcagcagctgacccgcttctctgctcacgtagtagcctgggtggtctccactggagtg
gccgtggcctgctgtgtggctgtttactacctggctgagtacaactcggagttcctgaag
aagcacagggacccctgggcggtgctgctgctgcccttcgtggtgtcttgcatcaacctg
gttgtgccgcgcttctactccatgttcaggctagtggagaggtacgagatgccgcggcat
gaggtctacacgctcctgatccgaaacatcttcctgaagatgtcaatcattggcattctt
tgttactattggctcaacatcgtggccctgtctggcgaggagtgttgggaaaccctcatc
ggccaggaaatctaccggctccttctgatggatttcttgttctctttggcggattccctt
ctcggggagtttctcaggaggatcattgggatgcgattcatcacgagtcttggcttgcag
gaattcgacattgctaggaacgttctagaactgatctatgcacaaactctggtgtggatt
ggaatcttcttctgccccttgctgccctttatccaaatgatcacccttttcatcatgttt
tatgtcaaaaatatcagcctgatgatgaatttccagcctccgagcaaagcctggcgggcc
tctcaaatgatgactttcttcatcttcttgctctttttcccgtctttcactggagtcctg
tgcacgctggccatcaccatctggaggttgaaaccctccgccgactgtggccccttccga
ggcctgcctttcttcattcactccatctacagctggatcgacaccctaagcagacggcct
ggctacctgtgggttgtttggatctatcagaacctcattggaagtgtgcacttcttcttc
atcctcactctgattgtgttaatcatcacctatctttactggcaaatcacagaaggaaga
aagataatgatcaggcttctccatgaacagattatcaatgaaggcaaagataaaatgttt
ctgatagacaagttgatcaaactacaggatgcagagaagagagcaaaccccagctcactc
gtactggaaaggagagaggtggagcagcaaggatctttgcactttggggagcgtcagtct
acccctgacctgcgatacaggcggtccgttcaagaagacagtacgaaggcgtga
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