KEGG   Oryctolagus cuniculus (rabbit): 100343811
Entry
100343811         CDS       T03373                                 
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100343811
   04121 Ubiquitin system [BR:ocu04121]
    100343811
Enzymes [BR:ocu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100343811
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100343811
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100343811
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP Prok-RING_4 zf-C3HC4 RING_XB3-XBAT31 KH_2 KH_DEAH11_2nd zf-RING_UBOX
Other DBs
NCBI-GeneID: 100343811
NCBI-ProteinID: XP_008259545
LinkDB
Position
9:24438636..24461815
AA seq 663 aa
MPSGSSAALALAAAPAPLPQPPPPPPPPPLPPPAGGPELEGDGLLLRERLAALGLDDPSP
AEPGAPTLRAAAAAVAAAAAAAQGQARRAAGLSPEERAPPGRPAAPEAAELELEEDEEEA
EEAELDGELLEEEELNEAEEEDRPSLLLLSPPAAAASQSQPIPGGPLGSVLLPAAGFDAR
EAAAAAGVLYGGDDAQGMMAAMLSHAYGPGGCGAAAAAAALNGEQAALLRRKSVNTTECV
PVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREILSA
AEHFSMIRASRNKNGPALGGLSCSPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQT
HTYIVTPSRDKEPVFEVTGMPENVDRAREEIEMHIAMRTGNYIELNEENDFHYNGTDVSF
EGGTLGSAWLSSNPVPPSRARMISNYRNDSSSSLGSGSTDSYFGSNRLADFSPTSPFSTG
NFWFGDTLPSVGSEDLAVDSPAFDSLPTSAQTIWTPFEPVNPLSSFGSDPSGNMKTQRRG
SQPSTPRLSPTFPESIEHPLARRVRSDPPSTGNHVGLPIYIPAFSNGTNSYSSSNGGSTS
SSPPESRRKHDCVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQ
IHS
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgccgagcggcagctccgcggccctggccctggcggcggccccggcccccctgccgcag
ccgcccccgccgccgccgccgccgccgctgccgccgcccgcgggcggcccggagctcgag
ggggacgggctgctgctgagggagcgcctggccgcgctaggcctcgacgaccccagcccg
gcggagcccggcgccccgacgctccgggccgcggcggcggcggtggcggcggcggcggcg
gcggcgcagggccaggcccggcgggcggcggggctgtctcctgaggagcgggcgccgccc
ggccggcccgcggccccggaggcggccgagctggagctggaggaggacgaggaggaggcg
gaggaagcggagctggacggagagctgctggaggaggaggagctgaacgaggccgaggag
gaggaccggccgtcgctgctgctgctgtcgccgcccgcggccgccgcctcgcagagccag
ccgatcccgggcgggcccctgggctcggtgctgctgccggccgcaggcttcgatgcgcgg
gaggcggcggcggcggcgggggtgctgtacggaggggacgatgcccagggcatgatggcg
gcgatgctgtcccacgcctacggccccggcggctgcggggcggcggcggcggcggccgcg
ctgaacggggagcaggcggccctgctgcggaggaagagcgtcaacaccaccgagtgcgtg
ccggtgcccagctccgaacacgtcgccgagatcgtgggccgccagggttgtaaaattaaa
gcactgagagccaagacaaacacgtatatcaagacacctgttcgtggtgaagagcccatt
tttgttgtgactggacggaaagaagatgttgccatggccaaaagagaaatcctctcagct
gcagagcacttctccatgattcgtgcatctcgaaacaaaaacggccctgccctgggaggg
ctgtcatgtagtcctaatctgcccggtcagaccaccgtccaagtcagggtcccctatcgt
gtggtggggttagtggttggacccaaaggagcaactattaaaagaatacagcagcaaacc
catacctacatcgtaactccaagcagagataaggagcctgtcttcgaagtgacagggatg
ccggaaaatgtagaccgagcgcgggaagaaatagagatgcatattgccatgcgtacagga
aactatatagagctcaatgaagagaatgatttccattacaatggtaccgacgtaagcttt
gaaggtggcactcttggctctgcgtggctctcctccaatccagttcctcctagtcgcgca
agaatgatatccaactatcgaaatgatagctccagttctctaggaagtggttccaccgat
tcctactttggaagcaataggctggctgacttcagtccaacaagcccatttagcacagga
aacttttggtttggagatacactaccatctgtgggctcggaagatcttgcagttgactct
cctgcctttgactctttaccaacatctgctcaaactatctggactccgtttgaaccagtt
aacccactctctagctttgggagtgatccttctggtaacatgaagactcagcgtagagga
agtcagccatctactcctcgtctgtctcctacatttcctgagagcatagaacatccactt
gctcggagggttaggagcgacccacctagtacaggcaaccatgttggccttccaatatac
atccctgctttttctaatggtaccaatagttactcctcttccaatggtggctccacctca
agctcacctccagaatccagaagaaagcacgattgtgtgatttgctttgagaatgaagtt
attgctgccctagtgccatgtggccacaacctcttctgcatggaatgtgccaacaagatc
tgtgaaaagagaacgccatcatgtccagtttgccagacagctgttactcaggcaatccaa
attcactcttaa

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