Oryctolagus cuniculus (rabbit): 100343812
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Entry
100343812 CDS
T03373
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100343812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100343812
Membrane trafficking [BR:
ocu04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
100343812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WDR55
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF12
WDR72_alpha-sol
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
Beta-prop_DCAF4
LRS4
Motif
Other DBs
NCBI-GeneID:
100343812
NCBI-ProteinID:
XP_051707149
Ensembl:
ENSOCUG00000002512
LinkDB
All DBs
Position
9:complement(18589737..18965783)
Genome browser
AA seq
1513 aa
AA seq
DB search
MRFENTMAGNSLVLPIVLWGRKAPTHCISAVLLTDDGDTIVTGCHDGQICLWDLSVELEV
NPRALLFGHTASITCLSKACASSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGI
QFYQFSVGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQE
DTVVALSVTGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVC
SKYWRVFDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASD
SFRSDVGKAVENLIPPVQYSLLDRKDKELLICPPVTRFFYGCREYFHKLLIQGDSSGRLN
IWNISDIADKQGEEELEMTTSVSLQEAFDKLSPCPAGIIDQLSVVPNSNEPLKVTASVYI
PAHGRLVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQ
VSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICS
VASDHSVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALD
RCVMGITAVEILSACDEVVPAAVDSLSHPAINLKQAMTRRSLAALKNMAHHKLQTLATNL
LASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALI
SPENLQKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREE
SDPEYRASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSF
GLLSRGGHMSLMLPGYNQSAFKPPHGKAEAGRKLPATEGVGKGTYGVSRAVTTQHLLSII
SLANTLMSMTNATFIGDHMKKGPARPPRPSTPDLSKARGSPPTSSNIVQGQIKQETAVPQ
FSPLYFFCFPLQVAAPVVSARSDADHAGSDPASTPALHTCFLVNEGWSQLAAMHCVMLPD
LLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQY
MDHVISPGVTAEAMQTISTAPDASGPEAKVQEEEHDLVDDDITTGCLSSMPQMKKISTSY
EERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCK
ALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLA
NITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNMHTT
TLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFY
MVSYYERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDS
HISFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVI
LMAHDGKEHRFMV
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttgaaaacacaatggcaggaaacagccttgttctacccatcgttctttggggc
cgcaaagcaccaacacattgcatctcagcagtacttttgacagatgatggggacacgatt
gtaacaggatgccacgatggacaaatatgtctctgggatctttcagtagaattggaagtt
aatcctcgggctctgttatttggtcatacagcttcaatcacttgcttatctaaagcttgt
gcttccagtgacaaacagtatattgtgagtgcatctgagagtggagagatgtgcctctgg
gatgtgaatgatggcagatgtattgaatttacaaagttagcctgcacacatactggcata
caattctaccaattctcagttggaaaccagcgggaaggaaggcttttgtgccatggacat
taccctgaaatcctggttgtggatgctactagccttgaggtgctctactccttagtatca
aagatctcaccagactggattagctccatgagtattattcgatcccaccgaacacaagag
gacactgtggtggcactctcggtgacgggcatcctgaaggtgtggatcgttacctctgaa
ataagtggcatgcaggatactgagccaatatttgaggaggaatccaaacctatttattgt
cagaattgccaaagcatctccttttgcgcattcacacaaagatcacttttggttgtgtgc
tccaaatactggagggtatttgatgctggagactattccctgttgtgttcaggtcccagt
gaaaatggccagacgtggactggaggggattttgtatcagcagataaagtcatcatttgg
actgaaaatgggcaaagttacatttacaaactccctgctagttgtcttccagctagtgat
tcattccgtagtgatgtggggaaagcagttgaaaatctaattcctcctgtacaatatagc
ctcttggatcgaaaagataaagagttgcttatttgtcctcctgttactcgattcttctat
ggatgccgggaatacttccataaactgttaattcaaggggattcctctggaagattaaat
atctggaacatctcagacatagctgataaacaaggtgaagaagagctggagatgacaact
tctgttagtttgcaagaggcatttgataaactgagtccttgtcctgctggaattatagat
cagctgagtgtggttcccaatagtaatgaacctctgaaagtgactgcaagtgtgtacata
ccagcacacgggcggcttgtttgtggccgtgaagatggaagcataattattgtacctgcc
acacagacggccatagtacagctgttgcaaggggaacacatgctcagaagaggttggcca
cctcacagaacactccggggtcatcggaacaaagtcacatgtttgctatatcctcatcag
gtctcagctcggtatgaccaaagatacctgatatctggaggtgtggatttttccgtcata
atttgggacatattttctggagaaatgaaacatatcttctgtgttcatggaggcgagatt
actcaacttctagttccgcctgaaaactgtagtgcaagagtgcagcactgcatctgctcc
gtcgccagtgaccactcagtaggacttctaagtttgcgtgagaaaaagtgcatcatgctg
gcatcacgtcaccttttccctattcaggtcatcaagtggaggccttcagatgattacctg
gtagtgggatgctcagatggctctgtgtatgtctggcaaatggatactggtgcattggat
cgttgtgtgatgggaataacagcagtggagatactgagtgcttgtgatgaagtggttcct
gctgccgtggattcactcagtcacccagcaattaacctcaaacaagctatgacaagacgt
agtctcgctgccctcaaaaatatggcccatcataagcttcaaaccctggcaacaaacctc
ttggcttctgaagcatctgacaaggggaatttacctaaatattctcataactccctgatg
gttcaagcaataaagacaaacctaacagatccggacatacacgtgcttttctttgatgtg
gaagcgttgattattcaactcctgactgaagaagcctctaggccgaatactgcgcttatt
tccccggagaatttgcaaaaagcatctggcagttcagacaaagggggctcttttctaact
ggaaaacgagcagcagttctcttccaacaagtgaaagaaactatcaaagagaacataaag
gaacacctccttgatgatgaagaggaggatgaggagataatgaggcagagaagagaagaa
agtgatcccgagtaccgggccagcaaatcgaagccattgactctcttagagtataattta
acaatggacacggcaaaactgttcatgtcctgcctccatgcctggggtttgaatgaagtt
ctggatgaagtttgcctcgatcgccttggaatgctgaaaccccactgcacagtatcattt
ggcctcttatcaagaggaggccatatgtcactgatgcttcctggttataatcagtctgct
tttaaaccaccacatgggaaagcagaagcaggaaggaagcttccagcaacagagggcgta
ggaaaggggacttacggagtgtcccgagccgtcaccacacagcacctcctgtcgatcata
tctttggcaaatactttaatgagtatgaccaatgcaacctttattggggatcatatgaag
aagggccctgccaggccacctagaccaagcaccccagacctttctaaggcaaggggttcc
cctccaacttccagtaatattgtgcaaggacagattaaacaagaaactgctgtacctcaa
ttctctcctctttatttcttctgttttcctctgcaagtcgctgcacctgtcgtttccgct
cggtctgatgctgatcatgctggctctgaccctgcttctactcctgctttacatacctgt
ttcttagtaaatgaaggatggagtcagttagctgctatgcattgtgttatgctgcccgac
ctgctgggactggataaatttaggcctccacttctagagatgctggctcgcagatggcaa
gatcgatgcttggaggtcagagaagctgcacaagcccttcttctagcagaactgagaaga
attgaacaggcaggacggaaagaagccatcgatgcctgggctccttatttacctcagtat
atggaccatgtcatatcacctggggtcacagcagaagccatgcagactatctccactgct
cccgatgcctcaggccctgaagccaaagtccaggaggaagagcatgaccttgtggatgat
gacatcaccacgggttgtttatcaagtatgccccaaatgaaaaaaatttccacatcttat
gaagaaagacgcaagcaagctactgctatcgttttgctaggagtaataggagctgaattt
ggtgctgaaattgaacctccaaaactgttgaccagacctcgaagctctagtcagattcct
gaaggatttggtttgaccagtggtggatccaactactccctggccagacatacttgcaag
gccctgacatttcttctgctgcagccaccaagccccaaacttcccccacacagcactatc
cgaagaacagccattgatctgattggacgaggtttcacagtttgggagccttacatggat
gtgtctgctgttctgatggggcttctcgaactttgtgctgatgctgaaaagcagcttgcc
aacatcacaatggggctgcctctgagcccagcagctgactccgcccgctctgcgaggcat
gccctctcgctcattgccactgccagaccacccgccttcatcactaccatagccaaagag
gtgcacagacatacagctcttgcagcaaatacccagtcacaacagaatatgcacaccaca
actcttgcacgagctaaaggggaaatcctgagagtcattgaaattctaattgaaaagatg
cccacagatgttgtggatcttcttgtggaggttatggacatcattatgtactgccttgaa
ggatccttagttaaaaagaaaggtcttcaggagtgtttcccagccatctgcaggttctac
atggtcagctattacgagcggaatcacagaatagcagtgggggcgcggcatggttcagtg
gccctgtacgacatccggactggaaaatgtcagaccatccatggacacaagggaccaatc
actgcagtggcctttgctcctgatggacgatacctggccacctactccaacactgacagc
cacatttccttctggcagatgaacacgtcactcctgggaagcatcggcatgctgaactcg
gcacctcagctacgctgcattaaaacttaccaggtgccccccgtgcagccggcctccccc
ggctcccacaacgccctcaagctggcccggctcatctggacttccaaccgcaacgtcatc
ctcatggcccacgacgggaaggagcaccgcttcatggtctag
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integrated database retrieval system
