Oryctolagus cuniculus (rabbit): 100343902
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Entry
100343902 CDS
T03373
Symbol
SKIC3
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100343902 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100343902 (SKIC3)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
100343902 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_8
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_12
ANAPC3
TPR_9
ARM_TT21_C
ARM_TT21_2nd
TPR_15
Sel1
Fis1_TPR_C
ARM_TT21_5th
Sey1_3HB
BTAD
TPR_5
TPR_30
Suf
TPR_20
ARM_TT21_N
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
100343902
NCBI-ProteinID:
XP_002713968
Ensembl:
ENSOCUG00000010853
UniProt:
G1T057
LinkDB
All DBs
Position
11:74299025..74390856
Genome browser
AA seq
1562 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKSSHLNAKDDLPGVYQKLLDLYESVDKAKWCDVCK
KLVDLYYQEKKHLEVARTWHKLIKTRQEEGADDRELHQLWRKLTQLLAERTEDQNNETQQ
LLLTAFENALDLTEKIPSEDHQMLYKHFIHCLSKFPHESARLKKACEGMINIYPTVQYPL
EVLCLHLIESGNLTDEGQQYCCRLLEMDSKSGPGLIGLGIKALQDKKYEDAVRNLTEGLR
ESPLCTTGWYHLAETQVKMHRPKEAVLSCNEALKSTENAGASPSSLQQKNQCLRLKAEAL
VQVSDSDSSEEAVRTLEQVSDANNIPGLLVLKSLAYLNKGSVDEATKIMEDLLSSYPDLA
EVHALEALIHFTKKDYLQAEKCFQRALEKDADVAAYHYQLGLTYWFMSEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDADSEAGAAAVDLSVE
LEDVETALAVLTAVTQKASAGTAKWAWLRRGLYYLRAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGSYTTALKSFTKASELNPESIYSVFKVAAIQQILGKYKEAVAQYQLIIK
KKGDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWALQQRADVSCLWKLI
GDACTSLYAVSPSKVHIHVVGVLLGQKEGKQVLKKSELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQVQHLAETGSSMSDLEELLEKSLHCLKKAVRLDSNNHLYWNALGVVACYSGI
GNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYRYNILQMN
AIPAAQVVLCKYIERIQNYAPAFTMLGYLNEHLQLKKQAADAYQRAILLSAEDKDTYNVT
VRHYGRLLCSIGEYDKAIQAFKSTPLEELEDIVGFALALFMKGLYKESSKAYERALSIVE
SEQDKAHILTALALAEYKQGKLDVAKTLLFKCSILKEPTTESLQALCALGLAMQDATLSK
AALNELLKHGKHRGSDYQRCLLTSAIHALQGRSVAVQRQASKAVHSNPADPALWSLLARV
VAQHAQRNAKGGAVAGNVAHILDSHHGKKALLYTAANQLAMGSRSAEDEKNVALKTIQKA
ALLSPGDPAVWAALMAACHADDKLALVNNTHPKRMDLYLALLSAVSASIKDKEFLENYKQ
SLETWSLSQAVTGLVDTGRTAEAEALCTKNLKSNPDQPAVILLLRQVQCKPLLEAQKQLP
DAVLEELQKAVVSNSTSVPAWQWLAYVYQSQGMMSAAEMCYRKSLQVASQQGSWSGKLSS
LLRLALLALEVCRANISGDHWPSLVQEATAEAMKLCFCPLAVLLQALLQFSRKMGARETR
RLLERVVYQPGYPKSVVSTARWYLLRHLHAKNDDELIEVLVKNAETHRDTRALKLHQKLS
SQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtgaagacggctctaaaaagtgctagagatgcaatcaggaacaaa
gaatacaaagaagctttgaagcactgtaagacagtgttgaaacaagagaagaataactat
aatgcctgggtttttattggtgttgctgcggctgagctagaacaacctgaccaggcccag
ggggcctataagaaagctgcagagctagagccagaccagttgcttgcgtggcagggatta
gcaagcctgtatgagaaaagtagtcacttaaatgctaaggatgacttgcctggtgtttac
caaaagcttctggatctttatgaaagtgttgacaaggcaaagtggtgtgatgtctgtaag
aaactcgtggatctctattaccaagaaaagaagcacctagaggtggctcgaacatggcac
aaactgatcaagacacggcaggaggagggtgcggacgatcgagagcttcaccagctgtgg
aggaaactgactcagttgctggccgagaggacagaggatcagaacaatgaaacccagcag
ttgcttttaactgcatttgagaatgcactggacttaacagagaagattcctagtgaagat
catcaaatgctttataagcatttcattcattgtttatccaaatttcctcatgagtctgcc
aggctgaagaaggcctgtgaaggaatgataaacatctatcccactgtgcagtatccatta
gaagttctttgcttgcacttaattgaatcaggaaatcttactgatgagggacagcagtat
tgttgtagactattagaaatggattcaaaaagtggtccaggccttattggcttaggcata
aaagcactgcaagacaaaaagtatgaagatgctgtcaggaacctaacagaagggttaagg
gaaagtcccctctgcacaaccggatggtatcatctggcagaaacccaagtcaaaatgcat
agacctaaggaagctgttctttcatgcaatgaagctttgaagagcacagagaatgctggt
gcctctccgagcagccttcaacagaagaatcagtgtcttcgtttgaaagcagaggctttg
gttcaggtttcggatagcgactcttcagaggaggcagtccgcaccctggagcaggtttct
gatgcaaataatattccaggccttctggttctcaaaagcttggcctatctgaacaaaggc
tcagtagatgaagctacaaagattatggaagacctcctctcctcttatcctgaccttgct
gaagttcatgcccttgaggctttaattcattttaccaaaaaggactacctacaagccgaa
aaatgttttcagcgagcgctggagaaggatgctgacgtggccgcataccattaccagctg
gggttaacgtattggttcatgagtgaagagacaagaaaagataaaacaaaggctctcacc
cactttctgaaggctgcaagactggacacatacatgggcaaagtcttctgctatttgggt
cattactacagagatgtggtgggagataagaacagagcccgtgggtgctacaggaaggcg
tttgaactggacgatgctgacagtgaagcgggagccgctgcagttgacctgagcgtggag
ctggaagatgtggaaactgccctagctgtcctaacagcagtaactcagaaggcaagtgct
ggaacagcaaagtgggcctggctcaggcgtggactgtactacttgcgagccggtcagcat
tctcaagcagtggctgatttacaggcagcattaagggcagacccgaaggacttcaattgc
tgggagtcactaggagaagcatacttaagcagaggaagctatacgacagccttgaaatcc
ttcacaaaagccagtgagctgaacccggaatccatatacagtgtgtttaaggttgcagca
atacagcaaatcttaggcaaatacaaggaggctgtagcacaataccagctgatcattaaa
aagaaaggagattatgtgcctgctctgaaaggcttgggtgaatgccatttgatgatggcc
aaagcagctctggtggattatctcgatgggaaagctgtggactacatagaaaaagcactg
gaatattttacttgggccctgcagcagcgagctgatgtgtcctgcctctggaagctgatt
ggtgatgcctgcaccagcctgtatgctgtctcaccatccaaagtgcacattcatgttgta
ggagtcctgctcggtcagaaagaaggaaaacaagtattaaagaaaagtgagctcctccat
cttggaggaaggtgttatggtcgcgcattgaaactaatgtccacatctaatacatggtgt
gaccttgggattaattactatcgccaagtacaacatctagcagaaacaggcagcagcatg
agtgatcttgaagagctgctggagaaatctttacattgtctgaaaaaggcagtgagactt
gacagtaataaccacctgtactggaatgctcttggtgtggttgcatgttacagtggtatt
ggaaattatgccctggctcagcactgcttcatcaaatcaatccagtccgaacaaattaat
gctgttgcatggaccaacttgggagtgttgtaccttgcaaatgaaaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttacttaatgtgctggattgga
caagctcttattgcagagacggttggaagctatgataccatggatctcttcaggcacacc
acagagctcagtatgcatactgagggagcaataggttatgcatattgggtctgcacaaca
ctgcaagataaaagcaacagagaaacagaactgtaccggtacaacatcctccagatgaat
gctattccagcggcacaagttgttttgtgtaaatacatagaaagaattcagaattatgct
ccagccttcacaatgttgggttacctgaatgaacacctgcaactgaaaaagcaagcagca
gatgcataccagagagcaattttgttgtctgcagaagacaaagatacgtacaatgttact
gtaagacattatggtagattgttatgttccattggtgaatatgataaagctatccaggct
tttaagtcaacacctctggaagagttagaagacatcgtaggtttcgcattggctttattt
atgaaggggctatataaagagagcagcaaagcttatgagagagccttgtctattgttgaa
tcagagcaagacaaagcccatatcttgacagctctggcgctagcagaatataaacaagga
aaactggatgtagccaagacattgctatttaaatgctctatcttaaaggagccgaccacc
gaaagccttcaagccctgtgtgccctcggcttggccatgcaggatgctaccctgtccaaa
gcagccctgaatgagctactgaagcacggcaagcacagaggcagtgattaccagaggtgc
cttctgacgtcagcgatccatgcactccagggccgcagcgtggcagtgcagcgacaggcg
tccaaggctgttcacagtaacccagctgaccctgctctttggtccctgttggcccgtgtt
gttgctcagcatgcccaacgaaatgcaaagggaggcgctgtagcaggaaatgtggcccat
attctggactcacatcatgggaagaaggcgttactgtacactgcagccaaccagctggcg
atgggaagcaggtcagcggaagatgaaaaaaatgttgctctaaagaccattcagaaggca
gcgctgctctctccaggtgaccctgctgtgtgggcagcactcatggcagcctgtcacgct
gatgataaactggctcttgtgaacaacactcatccaaagaggatggatttatacttggca
ctgttatctgctgtttctgcttcaattaaagacaaagaattccttgaaaattacaagcaa
tctcttgaaacgtggtctctgtcacaagctgtcaccggtctagtggacactggacgaaca
gctgaagccgaagctctctgcacaaagaatctaaaaagtaaccctgatcagccagctgtt
attctactcttgagacaagtgcagtgtaaaccactcctggaggcacaaaagcagctcccg
gacgctgtgctagaagaactgcagaaagcagtcgtgtccaactcaacctctgttccggct
tggcagtggctggcgtacgtgtatcagtcccagggaatgatgagcgctgcagagatgtgt
tacaggaagagtctacaagtggcgtcccagcagggcagctggagcgggaagctctcgagt
ctactgagactagccctgcttgcattagaagtctgcagggctaatatttccggtgaccac
tggccatccttggttcaagaggctactgctgaagccatgaaactttgcttttgtccactg
gctgttcttttgcaagccttgttacagttcagccgcaaaatgggggcgagagagacacgg
cgacttttggagagagtggtgtaccagcctgggtatcccaaatctgttgtatcaactgca
cgttggtatctgctgagacacttacatgccaaaaatgatgacgagctcattgaagtgctg
gtcaagaatgctgaaactcacagagatacaagggcattgaaactgcatcagaaattatcc
tcacaataa
DBGET
integrated database retrieval system
