Oryctolagus cuniculus (rabbit): 100343910
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Entry
100343910 CDS
T03373
Name
(RefSeq) thrombospondin-3
KO
K04659
thrombospondin 2/3/4/5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04145
Phagosome
ocu04151
PI3K-Akt signaling pathway
ocu04510
Focal adhesion
ocu04512
ECM-receptor interaction
ocu04518
Integrin signaling
ocu04820
Cytoskeleton in muscle cells
ocu05144
Malaria
ocu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100343910
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100343910
04518 Integrin signaling
100343910
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100343910
09144 Cellular community - eukaryotes
04510 Focal adhesion
100343910
09142 Cell motility
04820 Cytoskeleton in muscle cells
100343910
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100343910
09174 Infectious disease: parasitic
05144 Malaria
100343910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100343910
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100343910
00536 Glycosaminoglycan binding proteins [BR:
ocu00536
]
100343910
Membrane trafficking [BR:
ocu04131
]
Endocytosis
Phagocytosis
Opsonins
100343910
Exosome [BR:
ocu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100343910
Exosomal proteins of colorectal cancer cells
100343910
Exosomal proteins of bladder cancer cells
100343910
Glycosaminoglycan binding proteins [BR:
ocu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100343910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
100343910
NCBI-ProteinID:
XP_051714540
Ensembl:
ENSOCUG00000010032
LinkDB
All DBs
Position
13:<37779043..37787582
Genome browser
AA seq
956 aa
AA seq
DB search
METQELRGALALLLLCSFASASQDLQVIDLLTVGESRQMVAVAEKIRTALLTAGDIYLLS
TFRLPPKQGGVLFGLYSRQDNTRWLEASVVGKINKVLVRYQREDGKVHAVNLQQAGLADG
RTHTALLRLRGPSRPSPGLQLYVDCRLGDQHAGLPALAPIPPAEVSGLEIRTGQKAYLRM
QGFVESMKLILGGSMARVGALSECPFQGDESIHSAVANALHSILGEQTKALVTQLTLFNQ
ILVELRDDIRDQVKEMSLIRNTIMECQVCGFHEQRSHCSPNPCFRGVDCMEVYEYPGYRC
GPCPPGLQGNGTHCTDINECAHADPCFPGSRCVNTMPGFHCEACPRGYKGTRVSGVGIDY
ARASKQVCNDIDECNDGNNGGCDPNSICTNTVGSFKCGPCRLGFLGNQSHGCLPARTCHS
PAHSPCHVHAHCLFERNGAVSCQCNVGWAGNGNVCGPDTDIDGYPDQALPCMDNNKHCKQ
DNCLLTPNSGQEDADNDGVGDQCDEDADGDGIKNVEDNCRLFPNKDQQNSDTDSFGDACD
NCPNVPNNDQKDTDGNGEGDACDNDVDGDGIPNGLDNCPKVPNPLQTDRDEDGVGDACDS
CPEMSNPTQTDADSDLVGDVCDTNEDSDGDGHQDTKDNCPRLPNSSQLDSDNDGLGDECD
GDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDDFDNDAVVDPLDVCPESAE
VTLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGT
FHVNTVTDDDYAGFLFSYQDSGRFYVVMWKQTEQTYWQATPFRAVAQPGLQLKAVTSVSG
PGEHLRNALWHTGHTPDQVRLLWADPRNVGWRDKTSYRWQLLHRPQVGYIRVKLYEGPQL
VADSGVIIDTSMRGGRLGVFCFSQENIIWSNLQYRCNDTVPEDFEPFRRQLLQGRE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcaggaacttcggggggccttggctcttctcctgctttgctctttcgcatct
gccagtcaggacctgcaggtgatcgacctgctgactgtgggcgagtcccggcagatggtg
gctgtggcagagaagatccggacagccctactcactgctggggacatctacctcttgtcc
accttccgcctgccccccaagcagggtggcgtcctctttggcctctactctcgccaagac
aacacacgatggctggaggcctctgtcgtgggcaagattaacaaagtgctggtgcggtac
cagcgtgaggatggcaaggtccacgcagtgaacctacagcaagcaggcctggccgacggg
cgcacgcacacagctctcctgcgtctccgaggtccgtcccgacccagtcctggcctgcag
ctctatgtggactgcagactgggagaccaacacgctggtcttccagcactggctcccatc
ccccccgcggaggtcagtgggctggagattaggactggacagaaggcttatctaaggatg
cagggcttcgtggagtctatgaaacttatcctgggcggttccatggcccgggtaggtgcc
ctgagcgaatgtccattccaaggggacgagtccatccacagtgcagtggccaacgccctg
cactccattctaggggagcaaaccaaagcgctggtcacccagctcaccctcttcaaccag
atcctggtggagctgcgggatgacatccgagaccaggtgaaggagatgtccctgatccga
aacaccatcatggagtgtcaggtgtgcggcttccacgaacagcgttcccactgcagcccc
aacccgtgcttccgaggcgtggactgcatggaagtgtatgagtaccctggctaccgctgt
gggccctgccccccgggcctgcagggcaacggcacccactgcaccgacatcaatgagtgt
gctcacgctgacccctgcttcccgggttcccgctgtgtcaacaccatgcccggcttccac
tgtgaggcctgtcctcgagggtacaagggcacacgggtgtccggtgtgggcatcgactac
gcccgggccagcaagcaggtctgcaacgacattgatgaatgcaatgatggcaacaatggc
ggctgtgaccccaactccatctgtaccaacactgtgggctccttcaagtgtggtccctgc
cgcctgggtttcctgggcaaccagagccatggctgcctgcccgcgcggacgtgccacagc
ccagcccacagcccctgtcacgtccatgctcactgtctctttgaacgcaatggtgcagtg
tcctgccagtgcaatgtgggctgggcagggaacgggaacgtgtgcggccccgacacagac
atagacggctatccggaccaggccctgccctgcatggacaacaacaaacactgcaagcag
gacaactgcctcttgacacccaactccgggcaggaagatgctgacaacgacggtgtgggg
gaccagtgcgatgaagacgctgacggggacgggatcaagaatgtcgaggacaactgccgg
ctgttccccaacaaggaccagcagaactcggacacagattcatttggtgatgcctgtgac
aactgtcccaacgttcccaacaatgaccagaaggacacagatggcaacggagaaggagac
gcctgtgacaacgacgtggatggggacggcatccccaacggactggacaattgccctaaa
gtacccaacccactacagacagacagggatgaggatggggtgggagacgcttgtgacagc
tgccccgagatgagcaaccccacccagacagatgcagacagcgacctggtgggcgatgtg
tgtgacaccaatgaagacagcgacggcgacgggcatcaggacaccaaggacaactgccca
cggctgccaaatagctcccagctcgactcggacaacgacggactaggagacgagtgtgac
ggggacgacgacaatgacggcatcccagattacgtgcctccgggtcccgataactgtcgg
ctggtgcccaatcccaatcagaaggactcagatggcaacggcgtcggcgacgtgtgtgag
gacgactttgacaacgatgcggtggtcgaccccctcgacgtgtgtcccgagagtgcagag
gtgaccctcacagatttccgtgcctaccagaccgtcgtcctggatcctgagggtgacgct
cagattgacccaaactgggtcgtgcttaaccagggcatggaaatcgttcagaccatgaac
agtgaccccggcctggcggttggctacacggccttcaatggcgtggactttgaaggcacc
ttccatgtgaacacagtgactgacgacgactacgcaggctttctcttcagttatcaggac
agcggccgtttctatgtggtcatgtggaagcagacggagcagacctactggcaggccacg
cccttccgggccgtggctcagccagggctgcagctcaaggcagtgacttcagtgtcgggc
ccaggagagcacctccggaatgccctgtggcacacaggccacacccctgaccaggtccgg
ctgctgtgggctgacccacgaaacgtgggctggcgcgacaagacttcctatcgatggcag
ctgctgcaccggcctcaagtcggctacatccgggtgaagctctatgagggtccccagcta
gtggcggattctggggtgatcattgacacctccatgcgaggggggcgtcttggtgtattc
tgcttctcccaagaaaacatcatttggtccaacctgcagtaccgatgcaacgacacagtg
cccgaggactttgagccattccggaggcagctgctccagggaagggagtga
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