Oryctolagus cuniculus (rabbit): 100343935
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Entry
100343935 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 28
KO
K21072
A-kinase anchor protein 28
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
100343935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100343935
Membrane trafficking [BR:
ocu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100343935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
PH_13
PHD
PHD_2
PHDvar_NSD
zf_RING-like
Motif
Other DBs
NCBI-GeneID:
100343935
NCBI-ProteinID:
XP_017206111
LinkDB
All DBs
Position
Unknown
AA seq
1384 aa
AA seq
DB search
MDSDSDSPFNYSWPSFPKMKIRRRASKQDRSFEALKASKRPPALLAAGQLSDLLNGGDEI
YANCMVIDPVGDLDINYINIEGIPASTSAEPMGSTLGSENHMYLPPTETSPGMFPGREDR
EVVGNTEAQWPFTSPSSSCXNLNLSLGLHGLKKEQSHLKKRSSSLDALDVESVGAGHSEH
THVCYPPEPHGASRTGVPAADELDSFENDTIPDFHISRTESLSLSSNLQPKESLLSGIRS
RSYSCSSTKISLGKTRLVRDFTVCSSSEEQRAYGLSEPPRDKRIQEEEWDKYIIPTKSES
EKYKVSRTFSFLMNRMTSPRNKSKMKSKDAKDKEKLSRHQFVSGTFAGVLQCSACDKTVL
GKESFQCSNCNTSVHKGCRDAAPPCPKKFQEKYNKNKPQTILGNSSFRDAPQPGLSLHTS
SSMPIGLPTGRKDSAGQVHPLSRSVPGPTLESFRRSVTSLESESDSSNWRSRSHSDEVLQ
SVGSSPSTECFIMEDVVDSSLWSDLSSDAQEFEAESWSLAVDPLFCSQQEKDVIKRQDVI
FELMQTEMHHIQTLCIMSEVFRKGMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKER
RQESCAGNEKNFIISRIGDILVQQFSEENASKMKKIYGEFCSHHKEAVSLFKELQQNKKF
QNFIKLWNSNLLARRRGVPECILLVTQRITKYPVLVERILQYTKERTEEHRDLCRALSLI
KDMLAAVDLKVNEYEKNQKWLEILSKIENKTCTKLKNGDVFRKQALVSQERTLLHDGLVY
WKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMF
LISASSAGPEMYEIHTASKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRRAEARVAR
IQQCQEILSSQDQQICTYLEEKLHIYAELGELSGLEDVHLEPHLLIKPDPGEPPQAASLL
AAALKEAESLQVAVKASQVGEASQRSEDSCADSAWTDAPGSQELPGSPAASLGPEGAEGR
GCWDEDGGTQGVGTGQEIPDAVEKVECRSFPGSSQSEILQAIQNLTRLLYSLQAALTIQD
SHIEIHKLVLQQQESLAQGLSFRGSPFPDQEKARSLEKPREALDVHKLQHQFQQEQRRWH
RRCDQQQREQEAKESLLQARERECQSQEELLLRNRGELDHQLQEYQQNLERLREGQRMVE
REREQVRAQQGLLCRWKHGRQRSLPVAFPAGDKEAMELNRSESLCHEGSFFINDALVQMS
LNTFNKGAHQDGTHPPSLSHADLVRTCENQVDRRTDDPPPVDVNHELRTVPGACHQEPPL
QEGSQESCNNDLDTSQGESSAPDISNPHHPQPQTFAAEAKLDLQTVTRQDGETGDAVEEN
IVYL
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggattctgactccgactcaccttttaactactcctggccttcctttcccaaaatgaag
attcgccgaagggcatccaagcaagatcgctcctttgaggccctcaaagcatccaagcgc
cccccagcattgctggctgcaggccagctctccgacctgctgaatggaggagatgaaatc
tatgccaactgtatggtgattgatccggttggcgatttggatatcaactatattaatata
gagggcatccccgccagcaccagtgctgaacccatgggttccactctgggatctgagaac
cacatgtacctccctcctacagaaaccagccctggtatgttcccaggcagggaggacagg
gaagtggtgggaaatactgaagcccagtggccctttacatcaccatccagttcatgcnac
aatttgaatctttctttaggtcttcatggactcaagaaagaacaaagccatctgaagaaa
agaagttccagcctggacgccttggatgtcgagagcgtgggggccgggcattctgagcac
acacacgtgtgctaccctcccgagcctcacggtgcctcaaggaccggggttcctgctgcc
gatgaattggattcttttgagaacgacacaataccagattttcatatctccaggactgaa
tcgctttctctctcaagtaatctgcagccaaaggaatcactgctttctggaatccgctca
cgttcttattcctgctcgtcaaccaaaatttctttaggaaaaactcggttggtgcgtgac
ttcacagtgtgcagttcaagcgaggagcaaagagcttacggcctatcggagccaccaaga
gacaaaagaattcaggaagaagaatgggataaatacatcatacctaccaaatcggagtct
gaaaaatacaaagtgagccggactttcagcttcctcatgaataggatgactagtcctcgg
aataaatccaagatgaaaagcaaggatgctaaagacaaagagaaactcagtcgacatcag
tttgtctcaggaacattcgctggtgttctgcaatgttcagcttgtgataaaaccgtcttg
ggaaaagagtcattccagtgttccaactgcaacacgagtgtccacaagggctgcagagat
gccgcacccccgtgtcccaagaaattccaagagaaatacaacaagaacaaaccacagacc
atccttggaaactcctcgtttagagacgctccacagccgggtctctccttgcatacttct
tcctccatgcccattggattgcccacgggaaggaaggacagtgcgggccaggtgcatcca
ttgtccagaagtgtcccgggccccaccttggaaagcttccggaggtcagtgacatccttg
gagtcagagagtgacagcagcaactggagaagcaggtcgcactccgatgaggtgctgcag
tccgtgggctcttctccctccacggagtgtttcatcatggaagatgtcgtggattcttct
ctatggagtgacctcagcagtgatgcccaggagtttgaagcagaatcgtggagtcttgcg
gtggatcccttgttctgtagtcaacaggaaaaggatgtcatcaaaagacaggatgtcatt
tttgagctgatgcaaacggaaatgcatcacatccagaccctgtgcatcatgtctgaggtc
ttcaggaagggcatgaaggaggagctgcagctggaccacagcaccgtggacaagatcttc
ccctgcttggatgagctgcttgagatccaccggcacttcttctacagtatgaaggagcga
aggcaggagtcctgtgctggcaatgaaaagaattttatcatcagccgaattggagatatt
ctggtgcaacagttttcagaagagaacgcaagcaaaatgaagaaaatatatggagaattc
tgtagccatcacaaagaggccgttagcctcttcaaagagctccagcagaataagaagttt
cagaattttattaagctgtggaacagtaacctgctggctcgacgccgcggagttccagaa
tgcattctgctggttactcagcgcatcaccaagtaccctgtgttggtggaaaggattctg
cagtacacaaaggaaaggactgaagaacacagagacctgtgcagagctctgtccttgatt
aaagacatgctggcagctgtggacctgaaagtcaacgagtatgagaaaaaccaaaagtgg
ctggagatcctcagtaagattgaaaacaaaacatgcacgaagctcaagaatggcgatgtg
ttcaggaagcaggcgttggtgagccaagaaaggaccctcttgcacgacggcctcgtgtac
tggaagaccgccaccggccgcttcaaagatatcctggctctccttctgactgatgtgctg
ctctttctacaagaaaaagaccagaaatacatctttgcagctgttgatcagaagccatcc
gttatttcgctgcagaagctaattgctagagaagttgccaatgaggagcgaggcatgttt
ctgatcagcgcgtcatctgctggtcccgagatgtacgagatccacaccgcttccaaggag
gaacggaataactggatgaggcggatccagcaggcagtggaaagttgcccagaagaagag
ggaggaaggacaagcgaatccgacgaagagaggcggagagctgaagccagagtggccaga
attcagcagtgtcaggaaatactcagcagccaagaccagcagatttgcacgtatttggag
gagaagctgcacatctacgccgaacttggagaattgagtggattggaggatgtgcacctg
gaaccccacctcctcattaaacccgacccgggagagcctccgcaggcagcgtccttactg
gcagcagcactgaaagaagctgagagcctgcaggttgcggtgaaagcgtcgcaggtggga
gaggccagtcagcgctccgaggacagctgtgcagactctgcctggacagacgcacctggc
tcccaggagctgccggggtcacctgctgcctcgcttggcccagagggggcagaaggaaga
ggctgttgggatgaggacggcgggacccagggtgtgggaactggccaggagatccccgat
gcggtggagaaggtggaatgcagaagttttccaggttcttcgcagtcagagattctgcaa
gccatacagaatttaacgcgtctcctgtatagccttcaggctgccttgaccattcaggac
agccacatcgagatccacaagctggtcctgcagcagcaggagagcctggcccagggcctc
tcgttccgaggcagcccctttccggaccaggagaaggcccgcagcctggagaagccgcgc
gaggcgctggacgtccacaagctccagcaccagttccagcaggagcagcggcgctggcac
cgcaggtgcgaccagcagcagcgggagcaggaggccaaggagagcctgctgcaggcacgc
gagcgggagtgccagtcccaggaggagctgctgctgcggaaccggggcgagctggaccac
cagctgcaggagtaccagcagaacctggagcggctgcgtgagggccagcgcatggtggag
cgggagcgggaacaggtgcgcgcccagcagggcctgctgtgccgctggaaacacggccgc
cagaggagcctgcccgtcgcctttcctgctggggacaaggaggcaatggaacttaacaga
tctgagagtttatgccatgagggctcgttcttcatcaatgacgcattagtgcaaatgtcc
ctgaacactttcaacaaaggagcccatcaggatggcacgcaccccccaagtctgtcacat
gctgatttggtcaggacttgtgaaaaccaagtggaccgtaggacagatgatcctccgcct
gtggatgtcaaccatgaactgcggacagtccccggggcctgtcatcaggagcctcctctc
caggaaggcagccaggagtcttgtaacaatgatctagacacgtcccagggtgagtcctca
gcaccggacatctccaatccacatcaccctcagccacagaccttcgcagcagaagcaaag
ctcgatctccagacagtgaccagacaagatggggaaactggagatgcagtagaagaaaat
attgtttacctctga
DBGET
integrated database retrieval system
