Oryctolagus cuniculus (rabbit): 100343947 Help Entry 100343947         CDS       T03373                                  Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04151   PI3K-Akt signaling pathway ocu04510   Focal adhesion ocu04512   ECM-receptor interaction ocu04820   Cytoskeleton in muscle cells ocu04974   Protein digestion and absorption ocu05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:ocu00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100343947   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100343947  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100343947   09142 Cell motility    04820 Cytoskeleton in muscle cells     100343947  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     100343947  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     100343947  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ocu04147]     100343947    00536 Glycosaminoglycan binding proteins [BR:ocu00536]     100343947 Exosome [BR:ocu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100343947 Glycosaminoglycan binding proteins [BR:ocu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100343947  Hyaluronan   Extracellular matrix or blood plasma proteins    100343947 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 YcaO Motif Other DBs NCBI-GeneID:  100343947 NCBI-ProteinID:  XP_051683964 LinkDB All DBs Position Unknown AA seq 1027 aa AA seqDB search MRLARALLALLLQACWVAAQDLPVASKAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD KVKAFTKNFIDNLNDRYYRCDRNLVWNAGALHYSDEVEVISGLMRMPAGRDALKASVDAV KYFGKGTYTDCAIKRGLEELLIGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEVISQTITTIADMIK NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM KGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGTKGEAGYPGLPGCKGSPGFDGVQGPPGP KGDPGAFGLKGAKGEPGADGEPGRPGNTGPPGDEGEPGEPGPPGEKGEAGDEGNAGPDGP PGDRGGPGEPGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGEAGPIGPKGYRGD EGPSGLEGPRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK GYPGLKGDEGEPGDPGEDNNQVSPRGPKGAKGYRGPEGPQGPPGHTGPPGPDECEILDII MKMCSCCECRCGPIDILFVLDSSESIGLQNFEIAKDFIIKVIDRLSRDELVKFEPGQSHA GVVQYSHNQMQEHVDLRSPSIRNTQDLKEAIKKLQWMAGGTFTGEALQYTRDRLLPPTPN TRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDVFGFTAGSDQLNVISCQGLAPQ GRPGISLVKENYAELLDDSFLKNITAQICIDKKCPDYTCPITFSSPTDITILLDGSASVG SHNFDTTKRFAKRLAERFLSAGRTDPAHDVRVAVVQYSGRGQQQPERAALQFLQNYTVLA GTVDTMGFFNDATDVNDALSYVTRFYREASPATAKKKVLLFSDGNSQGATAEAIERAVQE AQRAGIEIFVVVVGRQVNEPHVRVLVTGKTAEYDVAFGERHMFRVPSYPALLRGVFYQTV SRKVALG NT seq 3084 nt NT seq  +upstreamnt  +downstreamnt atgaggctggcccgcgccctgctggccctgctgctgcaggcctgctgggtggccgcacag gacctcccggtggcctcgaaggccatcgctttccaagactgccccgtggacctgttcttc gtgctggacacctctgagagtgtggccttgaggctgaaaccctatggggccctggtggac aaggtcaaggccttcaccaagaacttcatcgacaacctgaacgacaggtactaccgctgt gaccgcaacctggtgtggaacgcgggcgcgctgcactacagtgacgaggtggaggtgatc agcgggctcatgcgcatgcccgccggccgcgacgcgctcaaggccagcgtggacgccgtc aagtacttcggcaaaggcacctacaccgactgcgccatcaagagggggctggaggagctg ctcattgggggctcccacctgaaggagaacaagtacctgattgtggtgaccgatgggcac cccctggaaggctacaaggagccgtgcggaggcctggaggatgcagtcaatgaggccaag cacctgggcatcaaagtcttctccgtggccatcacgcccgaccacctggagccccgtctg agcatcattgccacggaccacacgtaccggcgcaacttcacagcggccgactgggggcag agccgtgatgcggaggaggtcatcagccagaccatcaccaccatcgccgacatgatcaaa aataacgtggagcaagtgtgctgctccttcgagtgccagccggccagaggacctccaggg ccccggggcgaccccgggtacgagggagaacgcgggaagcctgggctcccaggagagaag ggagaagccggagaccctggaagaccgggggacctcggccctgtgggataccaaggcatg aagggagaaaagggcagccgtggggagaagggctccaggggacccaagggctacaagggc gaaaagggcaagagaggcatcgacggagtggacggcacgaagggagaggcagggtaccca ggcctgccagggtgcaagggctcccctggctttgacggagttcaaggaccccccggacct aagggcgaccctggcgccttcggactgaaaggagcaaagggggagcctggagcagacggg gagcctggaagacccgggaacacaggccctcctggagacgagggtgagcccggagagccc ggtccccccggagagaagggagaggctggagacgagggcaacgcaggacccgacgggcct cccggagacaggggtggccctggagagccaggaccccgggggaccccaggcgtgcggggg ccgagaggagacccgggtgaagctggaccccaaggtgaccagggcagagagggccccgtc ggcatcccaggagacccgggtgaggccggccccatcggacctaagggctaccgaggcgat gagggtccctcagggctcgagggtccccgaggagccccaggaccggccgggccccctgga gacccggggctgatgggcgagcggggcgaggacggcccccctggaaacggcactgagggc tttcccggcttccctgggtacccaggcagcaggggtcctcctggcataaatggcacaaaa ggctaccccggcctcaaaggggacgagggtgaacctggagaccctggagaagacaacaac caggtctcaccccgcggtcccaaaggggcgaaaggataccgaggccccgagggcccccag ggacccccaggacacacgggaccacctgggccagacgaatgcgagatcttggacatcatc atgaagatgtgctcgtgctgtgagtgcaggtgcggccccatcgacatcctgttcgtcctg gacagctctgagagcatcggcctgcagaacttcgagatcgccaaggacttcatcatcaag gtcatcgaccggctgagcagggacgagctggtcaagttcgagccggggcagtcgcacgca ggcgtggtgcagtacagccacaaccagatgcaggagcacgtggacctgaggagccccagc atcaggaacacgcaggacctcaaggaggccatcaagaagctgcagtggatggcgggcggc acgttcacgggcgaggctctgcagtacacccgggaccggctgctgccgcccaccccgaac acacgcatcgccctggtcatcaccgacgggcgctccgacacccagagggacaccacgccc ctcagcgtgctctgcggccccgacatccaggtggtctccgtgggcatcaaggatgtgttt ggcttcacggcgggctccgaccagctcaacgtcatttcctgccaggggctggcgccccag ggccggcccggcatctcgctggtcaaggagaactacgcagagctgctggacgacagcttc ctcaagaacatcaccgcccagatctgcatagataagaagtgcccggattacacctgcccg atcacgttctcttccccgaccgacatcaccatcctacttgatggctcggccagcgtgggc agccacaacttcgacaccacgaagcgcttcgccaagcgcctggccgagcgcttcctctcg gcgggcaggacggacccggcgcacgacgttcgggtggctgtggtgcagtacagcggccgg ggccagcagcagccggagcgggcggccctgcagttcctgcagaactacacggtgctggcc ggcaccgtggacaccatgggcttcttcaacgacgccaccgacgtcaacgacgccctgagc tacgtgacccgcttctaccgtgaggcctcgcccgccacggccaagaagaaggtgctgctg ttctccgacggcaactcgcagggggccacggcagaggccatcgagagggctgtgcaggag gcccagcgggcgggcatcgagatcttcgtggtggtggtgggccgccaggtgaacgagccc cacgtccgcgtccttgtcactggcaagacggccgagtatgacgtggccttcggcgaacgc cacatgttccgcgtgcccagctacccagccctgctacgaggcgtgttctaccagaccgtg tccaggaaggtggcactgggctag

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