Oryctolagus cuniculus (rabbit): 100343976
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Entry
100343976 CDS
T03373
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100343976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100343976
Membrane trafficking [BR:
ocu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
100343976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
AAA_22
RuvB_N
nSTAND3
AAA_33
TIP49
AAA_5
DUF815
AAA_29
AAA_28
RNA_helicase
ABC_tran
AAA_19
AAA_18
AAA_7
Sigma54_activat
IstB_IS21
Mg_chelatase
NACHT
Sigma54_activ_2
Zeta_toxin
Bac_DnaA
T2SSE
AAA_2
APS_kinase
Motif
Other DBs
NCBI-GeneID:
100343976
NCBI-ProteinID:
XP_002713855
Ensembl:
ENSOCUG00000008830
UniProt:
G1SVZ9
LinkDB
All DBs
Position
10:complement(33341583..33388893)
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AA seq
1281 aa
AA seq
DB search
MWGDSRPAGSGSGGAAVTVVFTNARDCFLHLPRRLVAQLHLLQNQAVEVAWGRQPVFLSW
VEGRRFSDPGESVAEISRQVGRTLGLADGGQVFLKPCSHVVSCEQVEVEPLSADDWEILE
LHAASLEQRLLDQIRVVFPTAVFPVWVDQRTHIFIRVVALVPAATYGRLEADTRLLIQPK
ARPATEDVSSRAHEARGEFPGLERDQQGTTRGLQTKQLPADNPRGADADPEVSVDSSSSL
WTMIGSIFSFGSEKKPETSWGVTEISAFKNMQSKVVPLDNIFRVCSSRPPSASHTAAPSV
SAAPCAVHVFPWDQEYFDVEPSFTVTYGKLIKLLSPKQQQRKTKQNVLSPEKERQMAEAP
DQKQIGADHSQEAGKARVLKVVWNGLEELKNAGTYTTHVEALHFGKVWIPEDLRKRLNIE
MHAVVRITPVEIIPKIPRFLKLQPKEDLPKDVSEAEVKTGFCSWLQQSATTTLPLVTSEE
EHIKLGIKDGLKEFSLCIVHSSEKEKEKEKSIFLLSPNLLQKITIQVLLDPMVKEENSEE
IDLILPFLKLNSLGGVGSLGISSMEHVTHSLLGRPLSRQLMALVAGLRNGALLLTGGKGS
GKSTLAKAVCQEARDTLDAHVELVDCKALRGKRLESIQRSLQAAFSEAAWRQPSVMLLDD
LDVIVGSAAMPEHAHSPDAVQGQRLAHALNDMIKELVAMGSLVALIATSQAQHSLHPSLV
SAQGVHIFQCVQHIQPPNQEQRREVLQSIIKNKLDCDTSKFTDLDLQCVAKATEGFVARD
FTVLVDRAMHARLSHQTVSTEKELVLTTLDFQKALQGFVPASLRNVNLHKPRDLRWERVG
GLHDVRQILVDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFI
SVKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQ
LLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQASRLEILKVLSAS
LPLADDVDLQHVAAVTDSFTGADLKALLYTAQLEALHGRLLSSGLQDGGSSSDSDLSLSS
MVFLNHSSGSDDSAAEGECGLDQSLVSLETPEILAEDSRFNMYRLYFGSSYESELGNGTS
SDLSSQCLSAPSSMTQDLPGAPGKEQPSSQPPVLRTASQEGSQELTQEQREQLRAEIGAI
RGRYQSHSGEDESLHQPGPVRTSLAISQSHLMAALGHTRPSISEEDWKTFSELYENFQNP
KKRKNQSGTMLFRPGQKVTLA
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcgacagtcgcccggcggggtcggggtcaggcggggcggcggtgactgtggtc
ttcaccaacgctcgggactgcttcctgcacctgccgcggcgcctcgtggcccagctgcac
ctgctgcagaaccaggccgtggaagtagcctggggccggcagcccgtgttcctgagctgg
gtggaaggccggcggttcagcgatccaggcgagagtgtggctgagatcagccggcaagtg
gggcggacactcggactcgccgacggcggacaggtgtttctcaagccgtgctcccacgtg
gtgtcctgtgagcaagttgaggtggagccgctctccgcagacgactgggaaatactggaa
ctgcacgctgcgtcccttgagcagcgccttctggatcagatccgagtcgttttccccaca
gccgtgtttcccgtctgggtggatcagcggactcacatcttcatccgggttgttgccctg
gtgccagcagccacttacgggaggctcgaggctgataccagactcctgattcagccaaag
gcacgtccagccacagaggatgtgtcctcacgagcgcacgaagcacgcggcgagtttcct
ggtcttgagagagaccagcaagggacaacaagaggacttcagaccaagcagctgccggca
gataacccgcgaggtgctgacgcagacccagaagtttctgtggactcctcttcaagccta
tggaccatgataggcagcattttttcttttggatccgagaagaagccagagacatcctgg
ggtgtaactgagatcagtgcgttcaaaaatatgcagtcaaaggtcgtcccgctggacaat
atcttcagggtgtgcagctcccggccccccagcgcgagccacacagcagcgccttctgtg
tccgccgctccctgtgccgtgcacgtgtttccatgggaccaggagtattttgatgtggag
cccagcttcactgtgacctatggaaagctaattaagctcctttctccaaagcagcagcaa
aggaaaaccaagcaaaatgtcctctcccctgaaaaagagaggcagatggcggaggcacca
gatcagaagcagatcggcgccgaccacagtcaggaagccgggaaggctcgcgtgctgaag
gtggtctggaacgggctcgaggagctgaagaacgccggaacgtacaccacacacgtagaa
gctctccattttgggaaagtctggattccagaggacctaagaaagagactaaatatagaa
atgcatgcagtagtcagaataactcctgtggaaattattcctaaaattccaagatttcta
aaattacaacctaaggaggacttgccgaaggatgtgagtgaagccgaggtaaaaacgggg
ttctgttcctggctgcagcagtctgcaaccaccacgctgcctttggtgacatcagaggaa
gaacatatcaagctgggaattaaggatggtttgaaggaattttctctgtgtatagttcat
tcttcagaaaaagaaaaagagaaagaaaaaagcatttttctgttgagtcccaatctgctg
cagaagatcacgatacaagtccttctagatcctatggtaaaagaagaaaacagtgaggaa
attgacttaattcttccctttttaaagctgaactctttgggaggtgtgggttccttaggc
atttcctccatggagcacgtcacgcacagcctcctgggccgccctctgtcgcggcagctg
atggcccttgtggcagggcttaggaatggggcccttttactcacaggaggaaagggaagt
ggaaagtcaactttagccaaggccgtctgtcaagaagcccgcgacacactggatgcgcac
gtggagctagtcgattgtaaagctttacgagggaaaaggcttgagagcatccagaggagc
ctgcaggcagccttctcagaggccgcttggaggcagccgtccgtcatgctgctggacgac
ctggatgtcatcgtgggctcggctgccatgccggagcacgcgcacagtcccgacgccgtg
cagggccagcggctcgcacacgcattgaacgatatgatcaaagagcttgttgccatggga
agtttggttgcactgattgccacaagtcaggctcaacactcactgcatccttcacttgtg
tctgctcaaggagttcacatatttcagtgcgtccaacatattcaaccccctaaccaggag
caaagacgtgaagttctgcaaagtataataaaaaacaaactagactgtgataccagcaag
ttcacagatcttgacctgcaatgcgtagctaaggcaacggaagggtttgtggctcgagat
tttaccgtgcttgtggaccgagccatgcatgctcgtctgtctcatcagactgtgtccacc
gagaaagaattggttttaacaacattggacttccaaaaggctctgcaaggatttgttcct
gcgtctctgcgaaacgtcaacctgcacaaacccagagacctgcgctgggagagggtcggg
ggcttgcatgacgtccggcagatcctcgtggataccatccagttaccagccaagtatcca
gaattatttgcaaacttgcccatacgacagagaacaggaatactgctgtatggtcctcct
ggaacagggaaaaccttgctggccggggtcgttgcacgggagagtgggatgaatttcatt
agtgtcaaggggccagagttactcagcaaatacattggagcaagtgaacaagctgttcgg
gatgtttttattagggcacaagctgcaaagccctgcattcttttctttgatgagtttgag
tccatcgctcctcgaagaggtcatgacaacacaggagttacggaccgtgtggttaaccag
ttgctgactcagctggatggagtagaaggcttacaaggtgtttacgtgttggctgcgacc
agccgccctgacctgattgaccctgctctgctgcggcctggccgcctggacaaatgtgtg
tactgtcctcctccagaccaggcatcccgccttgagattttgaaggttctcagtgcctcc
ctgcctctggcagacgacgtggacctgcagcacgtggctgccgtgaccgactccttcact
ggggccgatctgaaagcgctgctctacaccgcccagttggaggccctgcacggccggctg
ctgtccagcggactccaggacgggggctccagctctgacagcgacctgagcctgtcttca
atggtctttctgaaccacagcagtggctctgatgactccgctgcagagggcgagtgtggc
ttggatcagtccctcgtttctctcgagacgccggagatcctggcagaggactcgagattc
aatatgtaccggctctactttggaagctcgtatgagtcagagcttggaaacggaacctca
tccgacctgagctcgcagtgtctgtcggcgccgagctccatgacgcaggatctgccgggg
gcccccgggaaggagcagccgagctcacagcccccggtgctcaggacggcctcccaggag
ggctcccaggagctgacgcaggaacagagggagcagctgagggcggagatcggcgccatc
agaggcagataccagagccacagtggggaggatgaatcccttcaccaaccaggaccagtc
agaaccagtctggccattagccagtcgcacttaatggccgcactgggtcacacgagaccg
tccattagtgaggaagactggaagactttttctgagctgtatgaaaactttcaaaatcca
aagaagagaaaaaatcaaagcggaaccatgttgtttcgacctggacagaaagtaacttta
gcataa
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