Oryctolagus cuniculus (rabbit): 100344176
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Entry
100344176 CDS
T03373
Name
(RefSeq) tetratricopeptide repeat protein 6 isoform X2
KO
K24929
tetratricopeptide repeat protein 6
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
100344176
Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
100344176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_9
TPR_16
TPR_12
TPR_19
TPR_6
ARM_TT21_N
TPR_CcmH_CycH
TPR_7
COPI_C
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
100344176
NCBI-ProteinID:
XP_008267731
Ensembl:
ENSOCUG00000015486
LinkDB
All DBs
Position
17:58159911..58442833
Genome browser
AA seq
1889 aa
AA seq
DB search
MSMIPKHFGLKTREESYMFKELEKLRQETKKDFLRSRQKLESKPILDEGPIRLLQAPGWG
RPADKKRDSSPRPGGLQASPSPRGPGASEAALEPETHACTARPWGLGHAAARPKPRAFRP
REFYLRSSAFRRYPLQKPPVIAARVGTSKPLVLLPPPAPPVRPRALPEAGSPRPSASRQG
LELARAHEVTEEVARPAETRRAKARKTSSLSSEDSDLGPGGRWKQLMVTTHFVRRLSVGE
AGEAAGSVLRAQRPSRLSSEAQDAAWLSLPPRRAPPKSFKEVLTSLQSEAQQASDQIIKE
LIQSILGPNYDFKMEDMTLMGKAHLKTPQTQAEILHTQAEQGLERVVEESQMGVLKELPE
ATSSIFQMEQGNVSEWGESEAESIVFKSPEMSEVQVAEKTSRPLEDEQPTKDSKVGKQLS
LKEKSSKLLHITGKGVKRMRKSNLGIPPLRPGKSLKFLRAQNLPKKIPHDYCTPHLHDLC
TTIPAQELPVDLRLASRLYHTADKKGHDMLREIFGFPFLDDHFTEEEQRNRILYGIPVMG
ENQEYASIPSTAPGIFPELPQTAGEHAQKPYLQVLGEEVPAYPGISKLLWSPAAPKFSVP
ESVMKKTLYPKYESVQASQILTVKFSSESKESIIVGHSESICRFLSLRKSASFGDIKKSS
RVPSVQLKRVKSAVELRKEETAVPLEIKDDMQSNIKEVMFQKAKEWEFLLTKQSKTEQSK
PAKESIDVLLDNIQEKHAVRDLSVSLIEASRKAGISYIVYPRKTKMKLKKRLRSDKLTIV
YEELSKPPKTIQRSASHGTLPGQKKYFIRLPLYERPIRSPSLPSCLNFDNFVQSMGGIPE
NSDPRTWALDMFFKYELWKEPKEVVETSVLKDLPKTMKESKKLELSDSLKCDLPPGVIEH
YESEVQILTEEINSKKTFPVFAYCRRGAIYRKLGKLKSAMNDLQKVITLEPLFLNAYWHR
HFIYLFQDKINEALDDLNYISKYNKNNAEVYLSKAEIFRKQKDAALAILNYSQAIKCRPT
DADIYFRRGEMYEKQNRALAIDDFSKCIFYDPQRTDALFKRGMFYYENENWILATQDFTA
LLNIDHQHSKARTYRGRAYVKQRYYKQATQDLSAAIHLDPNNWLALYYRACLFRRSNPLR
ALQDYSVSVLINDGYENLSSFLHRGIIYTNLKFWMLAICDFETVISLERTIILPYINIGL
IHLLHLDNYTEAIWQFSEAIRIDPLYIQSYICRAEAFHKVNKLKKAVNELSRAIHLQPDG
IQLYIIRGQYLLMMKCYELAKFTIYQVSEMNRGLIDLTPIQQALIYSFCENHDKAIQVSE
GITWNRPDMATFALIAKAHMKAKRTKEAVRRFKEAVDAFSLSDQGPNAVSLLADCLYNLG
LCYTEEGNIQMAFDYFTRAVKVNPDFAESFYQRGLCKVKLHKDNSILDFNRAITLNPKHY
QAYLSRVAYYGLKGRYSKAILNCNEAIKVCQKNVRAYLYRGVLKYYNKSYKLAIRDLTTA
INMDKRNYVSFYNRALCYTKIGENQTALTDYGIVLLLDPGETITLNTFINRGRIYAELEQ
YGFAVEDFKQAVLMTQNNVSLCQAAAVCHHRIEEFEEAVNFFTQALKINPRFLDAYLGRG
SSYMEYGQEEPNKQAQKDFTTALHFNPAYTKARISLGYNLQAQGKFQKAWNHFTIALEVD
PKSYLAYEGRAVVCLQMGNNFAAMQDINVAIKINTTAEYLTNRGVIHELMGQKQNAMKDY
QAAISLNPAYSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENEYARMNRAVAHMLLKK
YEEAKEDFARVIDSCPLWAAAYFNRAHLHCCLKQYELAEVDLSKALSLKPNDALVYNLRA
EVRGKIGLIDEAVGDYNRALDLEEYASVK
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgatcccgaagcactttggactgaaaaccagagaagaatcgtacatgtttaaa
gagcttgagaagcttcgccaagagactaaaaaggattttctccgatccaggcagaagttg
gaatccaagccgattttagatgaaggccccattcgcctcctccaggctccgggctggggc
cgtccggcggacaagaagcgcgattcctcccctcgacccggagggttgcaagcttcccct
tcgcccaggggccccggggcctccgaggcggccctcgagccggagacgcacgcctgcacg
gcgcgcccctggggcctgggccacgcagccgctcggccgaagccccgagcgtttcgcccc
cgggaattctacttgcggagctcggcgttccgccgctaccctctccagaagccaccggtt
atcgccgccagggtgggcacctccaagcccttggtgctgctgccgccgcccgcgccgccg
gtgaggccgagagcgctcccggaggcggggagcccgcggccctctgcgtccaggcagggc
ctcgagctggcgcgggcccacgaggtcaccgaggaggtagctcggcccgcagagacgcgc
agggccaaagccaggaagaccagctccctttccagcgaggacagcgacctgggcccgggc
ggccggtggaagcagttgatggtcaccacccacttcgtgcgccggctgtcggttggcgag
gctggggaagcggctgggtccgtgctcagagcccagcgcccgagccgcctatccagcgag
gcgcaggacgccgcctggctgtccctgccgccccggcgagcgccccccaagtccttcaag
gaggtcctcacctcgctgcagtccgaggcccagcaggcttccgaccagatcatcaaagag
ctcatccagagcatccttggcccgaactacgactttaaaatggaagatatgactttaatg
ggaaaagcacatctcaaaacacctcagacgcaagcagaaatacttcacacgcaagcagag
caaggattagagagagttgttgaggaatctcaaatgggtgtgctcaaggaacttcctgaa
gctacgtcaagcattttccagatggagcagggcaatgtgtcagaatggggagaatcagaa
gcagaaagcatcgtatttaaatctccggaaatgtcagaggtccaggttgctgagaaaaca
agtagacctctagaagatgagcaacccacaaaagattcaaaagtaggcaaacagctgtct
ttaaaggagaaatcatcaaaattattgcatatcacagggaaaggagttaagcgaatgcga
aaaagtaatttaggaattccaccactgagaccaggaaaatctttaaaattccttcgggct
caaaacctacctaaaaaaattccacatgactactgcactccccaccttcatgatctgtgc
accaccatcccagctcaggagctgcctgttgacttgcgcctggcttctcggctgtatcac
accgctgacaagaaaggccatgatatgctacgggaaatatttggatttcctttcttagat
gatcactttacagaagaagaacaaagaaatagaatactgtatggaattcctgttatgggt
gagaatcaagaatatgctagtattccttcgacagcaccagggatattccctgaattgcca
cagacagctggagagcatgctcagaaaccttatctgcaagtgttgggagaagaagtgcct
gcttacccagggatttcaaagttgttgtggagtccagctgctcctaaattctctgttcca
gaatctgtcatgaagaaaaccctgtatccaaaatatgagagcgttcaagcaagccaaatt
ttaactgtgaaattttcatcggaaagtaaagaaagtattattgtaggtcatagcgaaagc
atttgtaggtttttgtcactaagaaaatctgcatcttttggagatattaaaaaatcttcc
agggtaccatctgtacaattaaagagagtaaaatctgctgttgaattgaggaaggaggag
acagcagttccattagaaatcaaggatgacatgcaaagcaatataaaagaggtgatgttc
cagaaagcaaaagagtgggagtttctgctcactaagcagagtaaaaccgagcaatccaag
ccagcaaaagaaagcatagatgtcctcttagacaacattcaggaaaaacatgctgtgaga
gatctctctgtctctctcattgaggcatctagaaaagctggcatcagttacattgtctat
cccaggaaaacgaagatgaaattgaagaaaagattgagatctgataaactcacaatcgtg
tatgaagagttatccaagcctccgaaaacaatacaaagatccgcatctcatggaacactt
cctggacagaaaaaatattttatcagacttccattatatgaacgtccaatacgaagtccc
agcttgccttcatgtttaaattttgataattttgtccagagtatgggaggaattccagaa
aatagtgatcctcggacatgggcacttgatatgttctttaagtatgaactttggaaagaa
cccaaagaagttgttgaaacatctgttctgaaagacttgcccaaaacaatgaaagaatca
aaaaagctagaattaagtgattctctgaagtgtgaccttccaccaggagttattgaacat
tatgaatccgaagtgcaaatcctgactgaagaaataaatagtaagaaaacatttcctgta
tttgcatattgtaggcgtggagctatttacagaaaactgggaaagttaaagagtgccatg
aatgatctacagaaagttataaccttggaaccattgtttctcaacgcctactggcaccgg
catttcatttatcttttccaagacaaaattaatgaagcattggatgacttgaattatata
tccaaatataataaaaataatgcagaggtgtatctgtcgaaagcagaaatttttaggaaa
caaaaagatgctgctcttgcaattctaaactatagccaggcaattaagtgcagacccaca
gatgcggacatctatttcaggaggggagagatgtatgaaaaacaaaacagagcgttggcc
attgatgacttttctaaatgtattttttatgatccccaaagaacagatgcattatttaaa
cgtgggatgttttactatgaaaatgaaaactggattttagccacacaggattttacagct
ttgttaaatatagatcaccaacattccaaagcaaggacatatcgagggagagcctatgtt
aaacagcgctattataaacaagcaactcaagacctttctgctgcaattcacttggatcct
aataactggttagcgttgtattaccgagcttgcttgtttagaaggagtaaccctttgaga
gcgctgcaggattacagcgtttcagttctgataaatgatggctatgagaatcttagttct
tttctacatcggggcataatctatacaaatctaaagttttggatgctggcaatttgtgac
ttcgaaacagttatttctctagaaagaactattattttaccttatataaatattggtctc
atacatttgctacacctggataactatactgaagccatttggcagttttctgaggccatt
agaattgatccattatatattcaaagctatatttgccgagcagaagcctttcataaggtg
aataagttgaaaaaggcagtcaatgaattatctcgggctatacaccttcagccagatgga
atccaattatacataataagaggacagtatcttcttatgatgaaatgctatgaacttgca
aagttcactatttatcaagtatcagaaatgaacagaggtctcattgatttgactcctata
cagcaagcactcatttattcattttgtgaaaatcatgacaaggccattcaggtctcagaa
ggaatcacatggaatagacctgatatggccacgtttgctctaatagcaaaagcacatatg
aaggcgaaaagaacaaaggaagctgtgaggaggtttaaggaggcagtggatgctttctct
ctttctgatcaaggaccgaacgctgtttctcttttagcagactgtctgtataatctgggt
ctctgttacacagaggaaggcaacatccaaatggcttttgattactttacaagagctgtg
aaagtaaatcctgattttgcagaaagcttttaccaacgagggctttgtaaagtaaaattg
cacaaggataattcaattctggattttaatcgtgcgattaccctcaatccaaaacattac
caggcatatttaagccgagtggcctactatggtttaaaaggcaggtattccaaagcaatc
ttgaactgtaatgaggctatcaaagtttgtcagaagaatgtacgtgcctatctctacaga
ggagttctgaaatactacaataagagttataagctagcaattagagatttaactacggct
atcaacatggacaaaagaaattatgtatcattttataacagagcattatgttataccaag
ataggggaaaatcaaacggcattgacagattatggaattgtcctccttcttgatcctgga
gaaactataacgttaaataccttcattaatcgtggacgcatctatgcggaactagagcag
tatggctttgcagtagaggattttaagcaagctgtactgatgacacagaataatgtgagt
ctttgtcaagctgctgccgtatgccaccacagaattgaagagtttgaagaagctgtcaat
ttctttacccaggctcttaaaattaacccacgtttcctagatgcttaccttggacgggga
agttcttacatggaatatggtcaggaggaacccaacaagcaagcccagaaggactttacg
acagcgttgcattttaacccagcatacacaaaagccagaattagtttgggctataattta
caggcccaaggaaaattccagaaagcttggaaccacttcaccattgccctagaagttgat
ccaaagagctacctagcatatgaaggaagagctgtggtctgtctccagatgggtaataat
tttgctgcaatgcaggatattaatgttgccataaagatcaatactacagcagaatactta
acaaatcgaggtgtgattcacgagctgatgggtcaaaaacagaatgcaatgaaagactac
caagcagcaatctctctaaaccctgcgtactccctggcttacttcaatgcagggaatatc
tattttcaccacaggcaattctcccaggctagtgactacttttcaaaggctttaaaattt
gatccagaaaatgaatatgctcgcatgaatcgagctgttgcacatatgttattaaagaaa
tatgaagaagcaaaggaagattttgcacgtgtaattgacagctgtcctttgtgggctgca
gcatactttaatagagcacatttacactgctgtttaaagcaatatgaactagctgaggtg
gatctcagtaaagccctgtctttgaagcctaatgatgctctcgtgtataatcttagagca
gaagttcgtggtaaaataggtctgattgatgaagctgtgggtgactataaccgtgcactt
gatcttgaagaatatgcttcagttaaatga
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integrated database retrieval system
