Oryctolagus cuniculus (rabbit): 100344254
Help
Entry
100344254 CDS
T03373
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100344254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100344254
Membrane trafficking [BR:
ocu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
100344254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF1045
DUF758
DUF7562
Motif
Other DBs
NCBI-GeneID:
100344254
NCBI-ProteinID:
XP_008268624
Ensembl:
ENSOCUG00000005714
LinkDB
All DBs
Position
18:47137970..47290803
Genome browser
AA seq
1896 aa
AA seq
DB search
MVDKNIYIIQGEINIVVGAIKRNARWSTHTPLDEERDPLLHSFSHLKEVLNSITELSEIE
PNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYALIDPTHEGTAEGMENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFTRLPQFKEEPKNYVGTNMKKISPCLLNKLELNSGEQTKALNQLERVL
LFKNLKLKMRAGGMSDSSKWKKQKRSPRPPRHMTKVMPSSELPTPNGTTLSSNLTGGMPF
IDVPTPVSSVSSEAASAVVSPSTDSGLEFSSQTTSKEDLTDLEQPGSPGYSTAAEPGSSE
LGVLEQPDLQTQQERAHVEKAQSASVESIPEVLEECASTADHSDSASVHDMDYVNPRGVR
FTQSSQKEGTALVPYGLPCIRELFRFLISLTNPHDRHNSEVMIHMGLHLLTVALESAPVA
QCQSLLGLIKDEMCRHLFQLLSVERLNLYAASLRVCFLLFESMREHLKFQLEMYIKKLME
IITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINYDCDYYCSNLFEDLTKLLSKNAF
PVSGQLYTTHLLSLDALLTVIDSTEAHCQAKVLNSLTQQEKKEPARASHEAVDVIREASN
TERATSDGKAIGLAPDVPGLHLPSGGRLSTELGKPGCGDLQEAGDSGADKKFTRKPPRFS
SLLPDPRELIEIKNKKKLLITGTEQFNQKPKKGIQFLQEKGLLTIPMDNTEVAQWLRENP
RLDKKMIGEFVSDRKNIDLLESFVSTFSFQGLRLDEALRLYLEAFRLPGEAPVIQRLLEA
FTEHWRNCNGSPFANSDACFALAYAVIMLNTDQHNHNVRKQNAPMTLEEFRKNLKGVNGG
KDFEQDILEDMYHAIKNEEIVMPEEQTGLVRENYVWNVLLHRGATPEGIFLRVPPGSYDL
DLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLSDVFDNLIISLCKF
TALSSESIENLPSVFGSNPKAHIAAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAQLLP
KAMVEVEDFVDPNGKISLQREETPSNRGESTVLSFVSWLTLSGPEQSSVRGPSTENQEAK
RMALDCIKQCDPEKMITESKFLQLESLQELMKALVSVTPDEETYDEEDAAFCLEMLLRIV
LENRDRVGCVWQTVRDHLYHLCVQAQDFCFLVERAVVGLLRLAIRLLRREEISGQVLLSL
RILLLMKPSVLSRVSHQVAYGLHELLKTNAANIHSGDDWATLFTLLECIGSGVKPPAALQ
ATARADASDTGAQSDSELPSYHQNDVSLDRGYTSDSEVYTDHGRPGKIHRSATDADVVNS
GWLVVGKDDIDNAKPGSGPSRPGPSPLVNQYSLTVGLDLGPHDTKSLLKCVESLSFIVRD
AAHITPDNFELCVKTLRIFVEASLNGGCKSQEKRSKSHKYDSKGNRFKKKSKEGSMLRRP
RTSSQHATRGGHSDEDEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAASIYSSWAEEQRH
LETGGRKIEADSRTLWAHCWCPLLQGIACLCCDARRQVRMQALTYLQRALLVHDLQKLDA
LEWESCFNKVLFPLLTKLLENISPADIGGMEETRMRASTLLSKVFLQHLSPLLSLSTFAA
LWLTILDFMDKYMHAGSSDLLSEAIPESLKNMLLVMDTAEIFHSADTRGGSPSALWEITW
ERIDCFLPHLRDELFKQTVIQDPVPMEPHSQKPLISAHLAPAAGDTRTPGHPPAPEIPSE
LGACDLEKPDPRATSSSSPGSPVASSPSRLSPTPDGPTPLAQSPLILQPLASPLQVGVPP
MTLPIILNPALIEATSPVPLLATPRPTDPISTSEVN
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atggtagataagaatatttacatcattcaaggggagattaacattgtggttggggccatc
aaacgaaatgcccgatggagcacccatacaccactggatgaagaacgggatcctttgctg
catagtttcagtcatctcaaggaggttttaaacagtataacagaactctcagagattgag
cccaatgtatttcttcgtccttttctggaagtgattcgctctgaagataccactggccct
atcactggactggcgcttacctctgtcaacaagtttctgtcctatgcacttatagatcct
actcatgagggcacggcagagggaatggagaacatggcagatgctgttacccatgcccgt
tttgtgggcacagatcctgccagtgatgaagttgtcctgatgaaaatccttcaggttcta
cggactctgttgctaaccccagtaggtgcccacctaaccaatgaatctgtgtgtgaaatt
atgcagtcttgcttccggatctgttttgaaatgaggctcagtgagttattgagaaaatcc
gcagagcacactctcgtagacatggtgcagctgctcttcacaaggttacctcagtttaaa
gaagaacccaagaactatgttgggaccaacatgaaaaagatttctccatgtctcctcaac
aaactggagctaaatagtggggagcagaccaaagccctgaaccagttagagagggtacta
ctctttaagaacctcaagctgaaaatgagagcaggaggcatgagtgattcatccaaatgg
aagaaacagaagagatccccccggcccccgcgccatatgaccaaagtcatgccaagttca
gagctacccactcccaatggaaccaccttatcctctaacctcactggtggtatgcccttc
attgatgtgcccactcctgtctcctctgtgagttcagaagctgcctcagcagtggtcagc
ccctctacagatagtggccttgagttttcctctcagaccacctccaaggaagacctcact
gacctggaacaacctggctccccagggtacagcacagctgcagagcctgggagcagtgag
ctaggggtccttgaacagcctgacctccagacacagcaggaacgggcccatgtggaaaag
gcccagtcagcatccgtggaatccattcctgaagtgttagaggagtgtgcctccactgct
gaccactctgactctgcctctgtccatgacatggattatgtcaacccccggggtgtgcgt
tttacacagtcctcccagaaagaaggcacagccttagttccttatggtcttccctgcatt
cgcgagctcttccgcttccttatctccctcaccaatccacatgaccgccataactcagag
gttatgatccatatgggactgcatttgctgacagtggcactcgagtcagctcctgtagct
cagtgccagagcctcttgggcctcatcaaggatgagatgtgccgccacttattccagctg
ctcagtgtagagcgactgaacctttatgctgcttccctgcgagtatgcttcctactgttt
gagagtatgcgagagcaccttaagttccaactggagatgtacattaaaaagctcatggag
atcatcactgtggagaaccccaagatgccttatgagatgaaggagatggcactggaggcc
attgtgcagctgtggcgtatccctagctttgtcaccgagctttacatcaactatgattgt
gactactactgttcaaacctcttcgaagacctcaccaagctgctctccaagaatgccttc
cctgtatctggtcagctatatacaacacacctgctgtctcttgatgccctattgacagtg
atcgacagcactgaggcccactgccaggccaaagtcctcaatagcctcacccagcaggag
aagaaagaaccagccagagccagccatgaggcagtggatgtcatccgagaagctagcaat
actgagagagcaaccagtgatgggaaggctataggcctggccccagatgtcccaggcctg
catctgccaagtggagggcggctgtcaactgaacttggaaagccaggatgtggtgatctg
caggaagctggtgactctggggctgacaaaaagtttacccggaagccacctcgattttcc
tctctcctgccagatccacgggaactaattgaaattaaaaacaaaaagaagctgttaatc
actggcacagagcagtttaaccagaagccaaagaagggaatccagtttctgcaggagaaa
ggccttctcaccatccctatggacaacacagaggtagcccagtggctccgagagaaccct
cggttggacaagaaaatgattggagagtttgtgagtgaccgcaaaaacatcgacctgttg
gagagctttgtgagcaccttcagctttcaaggactgcgactggatgaggctctccgcctc
tacctggaagcttttcgtttgcctggggaagcaccagtcattcagaggttgctggaggca
ttcacagagcattggaggaattgtaatgggtccccatttgccaatagcgatgcctgcttt
gccctggcctatgctgtcatcatgcttaacactgaccagcacaaccataatgttcgcaaa
cagaatgcaccgatgactctggaggagtttcgcaaaaacctaaaaggtgtgaatggaggc
aaggactttgagcaggacatcctggaggacatgtaccatgccatcaagaatgaggagatt
gtgatgcccgaggagcagacaggcttggttcgggagaactatgtctggaatgttcttctt
catcgtggtgccactcctgagggaatattcctgcgtgttcctcctggcagctacgatctt
gatctcttcaccatgacttggggtcccactattgctgctctctcttatgtctttgacaaa
agccttgaggagacaatcatccagaaagccatctcgggcttcaggaaatgtgccatgatc
tccgcccactatggcctcagcgacgtgtttgacaatctcatcatctctctatgcaaattc
acagctctcagcagtgagtctattgagaacttgcccagtgtatttggaagcaaccctaag
gcccacattgcagccaaaacagttttccatttggctcatcgtcatggtgacatcctgcga
gagggctggaagaatatcatggaggccatgctacaactcttccgagctcaactgctaccc
aaggctatggtggaggtagaagattttgtggatcccaatggcaaaatttctctacaacga
gaagagacaccatcaaaccgaggagagtcgacagtgctgagctttgtgagttggctgaca
ctgagtggtccggagcagtctagtgtgcggggcccctccactgagaaccaagaggcaaag
agaatggcattggactgtatcaagcaatgcgaccctgaaaagatgatcacagaaagcaag
ttcctccagttggagtcactacaagagctcatgaaggctctggtctcagtgacaccagat
gaagagacatacgatgaggaagatgctgcgttctgtttggagatgctgctaaggattgtg
ctggaaaacagggatcgtgtgggctgtgtgtggcagactgttcgagatcatctgtatcac
ctttgtgtccaagcacaagacttctgcttccttgtggagcgagcagtagtagggttgctg
cgcctggccattcggctgctccgaagagaagagatcagtggccaggtattgctctccctg
cgtattttgctactgatgaagcccagcgtgctgtcccgagtcagccaccaggtcgcatat
gggctccatgaactccttaagaccaacgcagccaatatccactcgggcgatgactgggcc
accctcttcacgctgctggagtgcatcggctcaggtgtgaagcctccagcagctctgcag
gccacagccagggctgatgcatctgacactggggcccagtcagacagtgagctcccgtcc
taccatcaaaatgatgtgagcctggacagaggatacacttctgactcagaggtctacact
gaccatggcaggcctggcaagatacaccgatcagccacagatgctgatgtagtcaacagt
ggttggttagtggtggggaaagacgacattgacaatgccaagccaggctcaggacccagc
cggccaggcccttcacctctggtcaatcagtatagccttacagtggggctggatctgggg
ccacatgacacaaagtccctccttaagtgtgtggaatcgctgtccttcattgtacgtgac
gctgcccacatcacacctgacaactttgagctctgtgtcaagactctgcgcatctttgtg
gaagccagtctgaatggcggatgcaagtcccaggagaaacgtagcaagagtcacaaatat
gacagcaaagggaatcgcttcaagaagaaatccaaggagggctcaatgcttcggagacct
cgaacctctagccaacatgccacgcggggcgggcacagtgatgaagatgaggatgaaggt
gtgcccgccagctaccatacggtgtctttacaggtcagtcaggacttgctagacctgatg
cacaccctgcacacgcgggcagcttctatctacagctcatgggcggaggagcaacgccat
ctggagacaggtggccggaagatcgaagcagattcacgcacgctctgggcccactgctgg
tgccctttactacagggcattgcctgcctgtgctgtgatgcccggcgccaggtgcggatg
caggcactaacctatctgcagcgggcactactggtacatgatctgcaaaaacttgatgcc
ctggagtgggagtcctgctttaataaggtgctgtttcctctattgaccaagctcttggag
aacattagccctgcagatatcggtgggatggaggagacccggatgagggcttccacactg
ctctctaaggtcttcctgcagcacctgtctccactgctgtccctctctacctttgcggcc
ctctggctcaccatcctggacttcatggacaagtacatgcatgcaggctccagtgactta
ctgtcagaggccatccctgagtctctgaagaacatgcttctggtgatggacacagcggag
attttccacagcgcagacacacgaggaggcagcccctcagccctctgggagatcacctgg
gagcgcattgactgtttcctgccccacctacgagatgagctctttaagcagactgtcatc
caggaccccgttcccatggagcctcacagccaaaaacctctgatctccgcccacctggct
cctgctgctggtgacaccaggacacctggccacccacctgccccagagataccctctgag
ctgggggcctgtgacttggagaagcctgacccacgagccaccagcagcagctccccggga
tcaccagtggcctctagccccagcaggctgagccctaccccagatgggccaacgccactg
gctcagtcccctctgatcctacaacccttggcctccccactgcaggttggcgtgccaccc
atgactctgcctatcattctcaaccctgcactcattgaagccacctctccggtgcccctc
ctggccactccacgccccacagaccccatatccacctccgaggtcaactaa
DBGET
integrated database retrieval system
