Oryctolagus cuniculus (rabbit): 100344343
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Entry
100344343 CDS
T03373
Name
(RefSeq) C-myc promoter-binding protein isoform X4
KO
K20163
DENN domain-containing protein 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100344343
Membrane trafficking [BR:
ocu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
100344343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_long
PPR_3
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
100344343
NCBI-ProteinID:
XP_008267099
Ensembl:
ENSOCUG00000007953
LinkDB
All DBs
Position
17:7519951..7646505
Genome browser
AA seq
1865 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDVSKPLEEEIHFNDACHKVAKPKEPITDVSVIIKSLGEEVP
QDYMCIDVTPTGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDWKERLKQGCEII
QNTPYGRPANISGSTSSQRIYITYRRASENMPQNALAVTDICIIIPSKGESPPHTFCRVD
KNLNNSMWGSAVYLCYKKSVAKTNTVSYKAGLICRYPQEDYESFSLPESVPLFCLPMGAT
IECWPPNSKYPLPVFSTFVLTGASAEKVYGAAIQFYEPYPEENLTEKQRLLLGLASLADG
KSDSSKTIHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFP
SPQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKIL
IHSLRPSVLTSVTEALVSMIFPFHWPCPYVPLCPLALADVLSAPCPFIVGIDSRYFDLYD
PPPDVSCVDLDTNTISQNGDKKNVAWKILPKKPCKNLMNTLNNLHQQLAKLQQRPRDDGL
MDLAMNDYDFNSGKRLHMIDLEIQEAFLFFMASILKGYRSYLRPITQAPSETATDATSLF
ALQAFLRSRDRSHQKFYNMMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKSGE
VRLIELDESFKSEHTVFVTPPEIPCLPNGEEPPLQYSYSGFPVLRNNLFERPEGFLQTQK
SKLPSKSSSPSSPSPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFICLPAY
VKVCHSKVRALKTAYDVLKKMQSKKMDPPDEVCYRILMQLCGQYDQPVLAVRVLFEMHKA
GIDPNAITYGYYNKAVLESTWPSRSRSGYFLWTKVRNVVLGVAQFKRALKKHAHLSQTTL
SGGQSYLGYDSLSKDEVRRGDIATEDIPEEKDKKGSDSGSLSESESTKGSVDCLPKLNFQ
SSSSIVRLSGTGDNSAHKIPGENTESTRELLLISSLEDTNETGNIESRCFRKRHKSDNDS
NLQQQMAWGNRNRNLSGGVLMGFMLNRINQKANPGDIVEKLGADAKILSNVISRSTRPNS
LDIGKPPLRSKRDSLEKESSDDDTPFDGSNCLADKVDSPVIFDLEDLDNETDGSKVGYVA
TQNSKRIQRMNSNFSAKPSEKTDVATGFDPLSLLVAETEQQQKEEEEEDEDDSKSISTPS
ARRDLAEEIVMYMNNMSSPLTSRTPSIDLQRACDDKLNNKKSPTLAKACRRSSLPPNSPR
PVRLTKSKSYTKSEERPRDRLWSSPAFSPTCPFREESQDTLTHSSPSFNLDTLLVPKLDV
LRNSMFTAGKGVAEKASKWYSRFTMYTSSSKDQSSDRTSLSSVGAQDSESTSLTDEEVCH
ELEGASSSQESSATSGTKGIDLSRTSLESSASLEGSLSKFALPGKSEVTSSFNMSNTNIF
QNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPFLNIEIRDL
RRPGRYFLKSSPSTENIHFPSSFSSQTRRSCISTSASGLDTSAVDVQGNFDLNSKSKLQE
DSCARSIQIPANRSKTTMSKCPVFPMARSISTYGPLDKEDTGGQKLIPTGSLPATLQGAT
DSLGLEWHLPSPDPVTVPYLSPLVVWKELESLLENEGDHAIAVADFVDHHPIVFWNLVWY
FRRLDLPSNLPGLILSSEHCNKYSKIPRHCMSEDSKHVLIQMLWDNMKLHQDPGQPLYIL
WNAHTQKYPMVHLLQKSDSSFNQELLKSIVKSIKMNDVYGPMSQILETLSKCPHFKRQRS
LYREILFLSLVALGRENIDIDAFDKEYKMAYDRLTPSQVRSTHNCDRPPSTGVMECRKTF
GEPYL
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacaaagggcctcgtgttgccgactactttgttgtggcagggttaactgat
gtttcaaagcctcttgaagaagaaattcacttcaatgatgcctgtcataaagtagctaaa
ccaaaagaacctatcacagatgtttcagttattattaaatctcttggggaggaagtgcca
caggattacatgtgtattgatgtcaccccaactggattgtcagctgatctcaataatgga
agtcttgtggggccacagatttacctttgctatagaagaggaagagataagcctccactt
acagatctgggggtgttatatgactggaaagaaagattgaaacagggctgtgaaattatt
caaaatactccctatgggcgccctgcaaatattagtggcagtacctcatcacaaagaatt
tacatcacttaccgaagagcctctgaaaacatgcctcaaaatgcactggctgtcacagac
atatgtatcataatacccagtaaaggagaaagtccgccgcatacattctgcagagtcgac
aagaatctcaataacagcatgtggggatcagcagtgtacttgtgttataagaaatcggtg
gcaaagacaaacactgtgtcttacaaagctggtctgatttgtagatatcctcaagaagat
tatgagtccttttcattaccagagtctgttcccctattttgtttaccaatgggtgcaaca
attgaatgttggccaccaaatagcaagtaccctcttcctgtattttctacctttgtgtta
actggagcctcagctgaaaaggtctatggtgctgctattcagttttatgaaccatatcct
gaggagaatctcacagaaaaacagagacttcttttaggtttagcatcattggcagatggg
aaatctgatagttccaaaacaattcacactaacaaatgcatctgtcttctttctcattgg
cctttttttgatgcattcaggaagtttctgacttttctgtaccgttactccatctctgga
cctcatgttcttccaattgagaagcatatttctcattttatgcataaagttccttttcca
tctcctcagagaccacggattttagttcagttatcaccacatgataatctgattctaagt
cagcccgtttcatcacctcttccactaagtggtggcaagttttcaacactacttcagaat
ctaggccctgagaatgctgtaacactactggtgtttgcagtaacagaacataaaattctc
attcattccttacgaccttctgtgcttactagtgtgacagaagcattagtgtctatgatt
tttcctttccactggccatgcccatatgtgcctctctgcccactggctttggcagatgtc
ttgagtgcaccatgtccattcatagtagggattgattcaagatactttgatctctatgat
cctccaccagatgtcagttgtgttgacctggataccaacaccatttctcaaaatggtgac
aagaaaaatgtggcatggaagatacttccaaagaagccttgtaaaaacttgatgaacaca
ctaaataatttgcaccagcaactggcaaaattgcagcagagaccacgagatgatggactg
atggacttagcaatgaatgactatgattttaattctggaaagaggttgcacatgatagat
ttggaaattcaagaggcatttttgtttttcatggcctctattttaaaaggctatagatct
tacttaaggccaataacacaagccccatctgagacagccacagatgcaacttctcttttt
gccctgcaggcttttttaagaagccgggatcggtcacatcaaaaattctacaatatgatg
accaaaacacaaatgtttattcgcttcattgaggaatgctctttcgtcagtgataaagat
gcaagcctggcattttttgatgattgtgtagataaagtagatatggacaagagtggtgaa
gtacgacttatagaactggatgaatctttcaaaagtgaacatactgtttttgtaacacca
cctgagatcccctgtctacccaatggtgaagaacctcctttacagtacagctatagtgga
tttccagttcttaggaacaatttatttgagagaccagaaggatttctacaaacgcaaaag
agcaaactgccttcaaaatcaagtagtcctagtagcccttctcccatgttcagaagaaca
aaacaggaaattaaatcagcccataaaattgccaagagatattcttccatccctcagatg
tggtccaggtgtctgctgcgtcactgttatggactgtggtttatttgtctcccagcttat
gtcaaagtatgtcattcaaaagtcagagctctgaaaacagcatatgatgtactaaaaaaa
atgcagtcaaagaagatggatccacctgatgaggtgtgctaccgcattcttatgcagctc
tgtggacaatatgatcagccagtgcttgcagtgcgagtgctttttgaaatgcataaagct
ggtattgaccccaatgccattacttatggttattataataaggctgttttggaaagtacc
tggccttcaagaagtcgtagtggctattttctttggacaaaagtaagaaatgttgtttta
ggagtagcacagttcaaaagagctttaaagaaacatgcacatttatcacaaacaactctc
tcaggtggccagtcttatctgggatatgattcattgtctaaggatgaagttagaagaggg
gatatagctactgaggacattccagaagaaaaagataaaaaagggagtgattctggttcc
ttgtcagagagcgagagtacaaaaggaagtgttgattgtcttcctaagctcaattttcaa
agttcttccagtattgttcgcctcagtggtacaggtgacaacagtgctcataaaatacca
ggagaaaacacagaaagcacacgtgaactgctcttaatatcatctcttgaggatacaaat
gaaacaggaaacattgaaagtagatgcttcaggaaaagacataaaagtgacaatgattct
aatttgcagcagcaaatggcctggggaaatagaaaccgtaatcttagtggaggggtactg
atgggatttatgctcaacagaattaatcaaaaagcaaatcctggagatatagttgaaaaa
ttaggagctgatgcaaaaattctttcaaatgttatctcaagaagcacaagaccaaatagt
cttgatattggaaagccacctttaagatcaaaaagagacagtctagaaaaggaatctagt
gatgatgatacaccttttgatggttctaattgcttggctgataaagtggattctcctgtt
atttttgatttagaagatttagacaatgaaacagatggatcaaaagtaggatatgttgca
acacaaaattccaagagaattcaacgaatgaacagcaacttctcagcaaaaccttctgaa
aaaactgatgttgcaacaggatttgatcccctctctcttttagttgctgagactgaacag
cagcaaaaagaagaggaagaggaggatgaagatgatagcaaaagcatttcgacaccatct
gcaaggcgtgatttagctgaagaaattgtgatgtatatgaataacatgagcagtcctttg
acaagtcgaacaccaagcattgacttacaaagggcttgtgatgataaattaaacaataag
aaaagcccaaccttggccaaggcttgcagaagatctagcctacctcccaattctcctagg
ccagtgagactcaccaaatctaaaagttacacaaaaagtgaggaaagaccgagggataga
ctgtggtcttctccagccttctcacctacttgcccatttagagaagaatctcaagataca
ttaacccattcatcaccctcatttaatttagatacgctactggtacctaaattagatgtt
ctaaggaatagtatgttcactgctggaaaaggagttgcagagaaagcaagcaagtggtat
tcaagattcaccatgtatacctcatcctctaaggatcaaagttctgaccgtaccagtctt
tcttcagtgggagcccaggattctgaatctacctctttgacagatgaagaggtctgccat
gagctggaaggagcctcttcctcccaagagagcagtgccacgtcagggaccaaggggatt
gaccttagccgaacaagtctggaaagttctgcctccttagaaggatccctgtcaaagttt
gcgttacctgggaaatcggaagtgacatcttcattcaacatgagtaatacaaatatcttc
cagaactatgcaatggaggttctcatctcaagttgttctcggtgtagaacttgtgattgt
cttgtccatgatgaagaaatcatggctggctggacagcagatgattcaaatctcaatact
acgtgcccattctgtggcaatcttttcttgccctttctgaatattgaaatcagagattta
agacgacctggaagatactttttgaagtcaagcccatctacagaaaatattcactttcca
tcctccttttcaagtcaaacaaggcggtcttgcatttcaacatcagcctctggtcttgat
acatctgctgtcgatgttcaagggaattttgatctaaacagtaaatctaaactgcaggaa
gattcctgtgctcgaagtattcagatccctgctaatagatcaaaaacaaccatgtcaaaa
tgtccagtatttccaatggcccgaagcattagtacttatggccccttggataaggaagat
accggaggacagaaactcattcctacaggcagcctgccagctactttacaaggagctaca
gattctttaggattagaatggcaccttccaagtccagatcctgtcactgttccatatctt
agtcctttagtggtctggaaggaactggaaagcttactggaaaatgaaggcgatcatgcg
atagcagtggcagactttgtggaccatcaccccattgtgttttggaaccttgtgtggtat
ttcagacgccttgacttgcccagtaacttacctggattgattctttcttctgagcattgt
aacaagtattcaaagattccccgccactgtatgtctgaagatagtaaacatgttttgata
cagatgttgtgggacaatatgaagttacatcaggatccaggacagcccttgtacatcctc
tggaatgctcacacccaaaagtatcccatggtccatttattacaaaagagtgatagctca
tttaaccaagagctattgaaaagtatagttaaaagcattaaaatgaatgacgtctatggc
ccaatgagtcagattttagagacactgagtaagtgtccacactttaaaagacagaggagt
ttatacagagaaatactatttctctcacttgtggcactgggaagagaaaacattgacata
gatgcatttgataaggagtacaagatggcatatgaccgtctgacacctagtcaagtcagg
agcacacacaactgtgacagaccaccaagcacaggggtgatggagtgtcggaaaaccttt
ggagagccttatctttaa
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