Oryctolagus cuniculus (rabbit): 100344553 Help Entry 100344553         CDS       T03373                                  Name (RefSeq) synaptopodin isoform X1   KO K21112   synaptopodin Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04530   Tight junction Brite KEGG Orthology (KO) [BR:ocu00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     100344553 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Calsarcin Motif Other DBs NCBI-GeneID:  100344553 NCBI-ProteinID:  XP_051699485 Ensembl:  ENSOCUG00000009270 LinkDB All DBs Position 3:32217943..32268481 Genome browser AA seq 1138 aa AA seqDB search MLDPHLPPPPLGPTEARPTPCAFRIPDGSYRCLALEAEESSSEEGLLGDAALTDPEEEEA AGSSGDCRAARGAPQLPGALSIQLPSCSREPQGGPRCDDRGSRDWDVVKARKVMTNNSSS GPGPRVAPKPALGRSTSLSEKDLKEAKARSQQIAAQLNTPPSSNSRGVQLFNRRRQRVNE FTLESRGQRGQKPSAAGHVPGPSLSAPSPPQPGPPRKPSPHGPDRGGPSMEGYSEDAGLL RHLEKMASEEEEVPLVVYLKENAALLTANGLHLSQSREAQQSPPTPPPAEDHSPTTDVNQ NLSSPSATVTAPASNSTCNPPATDVNQNPAAAVTPQSLPLASTPQHASEGPCPSNGSVPD SESPSTPCTDGQSRAPADEVRFSTLLIDKVSAPPSTTTSAFSREATPLPSSGPRAPEFTS SSLLVDVQPSTLGLAAEPELCGQAAAITPTKAYSEVHLTLAKPPSVVNRTARPFGMQAPG GSSQLERSPMVERRHLGEKAAAPQAPTLADRSPRPQRHVVSHSPMVERRVMGQRSPASER RPLGHFTPPPTYAETLSAAPPASRVRSPPSYSALYPSSDPRPPALKGQAVPTGKTGILEE SMARRGSRKSMFTFVEKPKATPNPDLLDLVQTADEKRRQREHGEVGADEEPFALGAEASN FQQEPAPRDRAGHSAAEEAVPEWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQS RMEKYVIESSGPAAAELARCPSPTMSLPSSWKYSTNAPGGFRVASRSPARTPPASLYHGY LPENGVLRPEPTKQPPYHMRPSLFVLSPIKEPARATPRATSPRAVSPRAASPAKPSTLDL GPSLPKAALPPSPVLPRPCRSSPGLYASPGQDGVQPPAVSPPYSSDVSPVSPSRAWSPRA KQAPRPSFSTRNAGIEAQDRREILPTSPPWTPAASRPPSSLDGWVSPGPWEPGRGSSTSS PPPPLPPPPPMSPSWSERSVSPLRPEHDARPPSRQLQALLARNIINAARRKSASPRPAGA ESLRPFSPPRPPPPPRMRSPQPARPGPLAAPGAAFAPIPRSPLPAGPSFCAGPRSPLPAP PRPYPYRRSPTDSDVSLDSEDSGVKSPGILAYNICPRGWTGSLRLKRGSLPGEASCTT NT seq 3417 nt NT seq  +upstreamnt  +downstreamnt atgctggacccccacctcccacctccgcccctcgggcccacggaagccaggcctaccccc tgtgccttccggatcccggatgggagctacaggtgtctggctctggaggccgaggagagc agcagtgaggagggcctgctgggagatgcagcgctcacggacccagaggaggaggaggcg gccggcagcagtggggactgccgagctgcccgaggggcgccacagctgcccggcgccctg agcatccagctgcccagctgctccagggagccgcaaggagggccccggtgtgacgacagg ggcagccgggactgggacgtggtgaaggctcggaaggtgatgacaaacaactccagctct ggccctgggcccagggtggccccgaaaccagccctgggccggagcactagcctcagcgag aaggacctgaaggaggcgaaggcgcgcagccagcagatcgcggcccagctgaacactcct cccagctccaactcccgcggcgtccagctcttcaacaggcgccggcagcgggtgaacgag tttaccttggagagccgtggccagcggggacagaagcccagcgccgcgggccatgtgcca gggccaagcctgagtgccccctcgccaccccagccaggccctccaaggaagcccagtccc cacggccctgatagagggggccccagcatggagggctactcggaagacgccggcttgctg cggcacctggagaagatggccagcgaggaggaggaggtcccactggtggtttatctaaag gagaatgcggccctgctgacggccaacgggctgcacctgtctcagagccgggaggcccag cagtccccgcctacccctcctccagctgaggaccacagcccgaccacagatgtcaaccag aacctctcgtcacccagtgccacagtcaccgcaccagcttccaacagcacctgcaaccca ccggccacggatgtcaaccagaacccagcagcagctgtcaccccacagagcctgcccctg gccagcaccccacagcatgcctccgaggggccgtgcccatccaatggctcggtgccagat tctgaatctcccagcaccccgtgcacggacgggcaatcccgggcaccagcggatgaggtg aggttcagcacactcctcatcgataaagtatcggctccaccttccaccaccaccagcgcc ttctcccgagaagccacgcccctgcccagctctggcccccgcgccccagagttcacatcc agctccttgctggtcgacgtgcagcccagcaccctagggctggcagcagaaccagagctg tgtggacaggcagctgccatcacacccaccaaggcatacagcgaggtgcacctcaccctg gccaagcccccgtcggtggtcaacaggaccgccaggccctttgggatgcaggccccgggc ggcagcagccagctggagcggagccccatggtagagagacggcatcttggggagaaggct gcagctccccaggcccccaccttggcagacaggagcccgcggccacagagacacgtggtg tcccacagccccatggtggagaggagggtgatggggcagcgaagcccagcctccgagaga cgccccttggggcacttcacgccaccacccacctacgccgagaccttgtcagcggctccc ccggcttcccgggttcgctctcccccatcctactctgccctgtaccccagctccgacccc aggcctcctgctctgaaaggccaggcagtgcccaccggcaagacaggcattttggaggag tcgatggcccgccggggcagccgcaagtccatgttcaccttcgtggagaagcccaaggcg accccgaaccccgacctgctggacctggtgcagacggccgacgagaagcggaggcagagg gagcacggtgaggtgggagcggacgaggagcccttcgccctgggcgccgaggcctccaac ttccagcaggagccggcccctcgcgacagggccggccacagcgcagcagaggaagccgtg cccgagtgggcctcctgcctcaagtctccccgcatccaggccaagcccaagcccaagccc aaccagaacctctcagaggcctctgggaagggggctgagctgtacgcccgccgccagtca cggatggagaaatacgtcatcgagtcatcgggtcccgcggccgccgagctggcccgctgc ccctctccgaccatgtccctcccctcgtcctggaaatactccaccaatgcacctgggggc ttccgggtggcttcccgcagccccgcacggaccccgcctgcctctctctaccacggctac ctgcccgagaacggggtcctgcgcccagagcccaccaagcagcccccgtaccacatgcgg ccctcgctcttcgtcctctcgcccatcaaggagcctgcccgggccacaccaagggccacc tccccccgagctgtctcgccgagagccgcctcccctgccaagcccagcaccctggacctg gggcccagtctgcccaaggcagccctcccgccgtcccctgtgctgcctcggccctgccgc tcctctccaggcctctacgcctcccctggccaggatggtgtccagccccccgccgtgagc cctccctacagcagcgacgtctcgccggtgtcaccctccagggcgtggtctccccgcgcc aagcaggcccccaggccctccttctctacccgcaatgctggcatcgaggctcaggaccgc cgggagattctgcccacctccccgccctggacaccagccgcatccaggccccccagcagc ctggacggctgggtgagccctgggccgtgggagcccggccgcgggagcagcacgagcagc cccccaccgccgctgcccccgccgccgccgatgtccccctcgtggagcgagcgctcagtg tccccgctgcggcccgagcatgacgcgcggccacccagccgccagctgcaggcactcctg gcgcgcaacatcatcaacgccgcccggcgcaagagcgcctccccgcggccggcgggcgcc gagagcctgcggcccttctccccgcctcggcctccgccgccaccgcgcatgcgttcgccg cagcccgcacgtccgggccctctggcggcgccaggggccgcattcgccccgatcccgcgg agcccactgcctgccgggccctcgttctgcgccggtccccggagcccgctgcccgcgccg cccaggccctacccctaccgtcgctcgcccacggactccgacgtgtccctcgactccgag gactccggggtcaagtcgcccggcatcctggcctacaacatctgcccccgcgggtggacg ggcagcctgcggctgaagcgcggcagcctccccggcgaagcctcctgcaccacctaa

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