Oryctolagus cuniculus (rabbit): 100344714
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Entry
100344714 CDS
T03373
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100344714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100344714
Enzymes [BR:
ocu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100344714
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100344714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
LRR_15
DUF4269
Motif
Other DBs
NCBI-GeneID:
100344714
NCBI-ProteinID:
XP_002709901
Ensembl:
ENSOCUG00000004962
LinkDB
All DBs
Position
2:complement(125745753..125786748)
Genome browser
AA seq
739 aa
AA seq
DB search
MKEMSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHR
LVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDN
LDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNML
GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKL
LEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF
PGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGM
KIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSGLQSKRSSLDSNCLDSSRDTDNGTP
FNSPVSTNKPSKLDSPPAGETERNSVEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKT
ASSPAVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKNVTPKRSHSPSIDGTSKR
LKDIEKFIRLESAFKDSRAAEERKRKSLDAIGGESMPIPTIDTSRKKRLPSKELPDSSSP
VPANNIRVIKNSIRLTLNR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtctgcgaacaccatgctggacagccagcgccaacaaaagcactatgga
attacctctccaattagtttggcatgtcctaaagaaattgatcatatttatacacagaaa
ttaattgatgccatgaaaccatttggagtgtttgaagatgaggaagaattaaatcacagg
ctggttgttcttggcaaattgaataatttagtaaaggaatggatttctgacgtcagtgag
agtaagaatctcccaccttcagttgtggctactgttggtggtaaaattttcacatttgga
tcctataggcttggagtacacaccaaaggagctgatattgatgcactttgtgtagctcca
agacatgtagagagatctgatttttttcagtctttttttgaaaaactgaaacatcaagat
ggcattagaaacttaagagctgtagaagatgcctttgtacctgttataaaatttgaattt
gatggtattgaaattgatctagtctttgcaagactggcaatacaaaccatatcagataat
ttagatctaagagatgactctcgcctgagaagccttgacataaggtgtattcgcagccta
aatggatgtagagttactgatgaaattttgcatttagtgccaaataaagaaacttttaga
ctcaccttaagagcagtcaaattatgggcaaaaaggcgtggtatttattccaacatgctt
ggattccttggtggtgtctcctgggctatgctggttgcaagaacttgccagttatatcca
aatgcagcagcttctactttagttcataagttctttttagttttttctaagtgggaatgg
ccaaatcctgtgctgttgaagcagccagaagaaagcaacttgaatttgcctgtctgggat
ccccgggtaaatccatcagataggtatcatctcatgcccataatcacccctgcctaccca
caacagaattctacgtataatgtgtccacatcaactcgaacagtaatggtagaagaattt
aaacaaggtcttgcagtcacagatgaaattcttcaggggaaatcagattggtccaaacta
cttgaaccaccaaatttctttcaaaaatatagacattatatagtgttgactgccagtgca
tcaacagaagaaaaccatctagagtgggttggattagtagaatcaaaaatccgtgtactt
gttggaaacttggaacggaatgaatttattactcttgcccatgtaaatccccagtcattc
ccaggaaataaggaacatcataaagacaacaattacgtgtcaatgtggttcctcggaata
atttttcggagagtagaaaatgcagaaagtgttaacatagacttgacatatgatatacag
tcatttactgatacagtgtacagacaggcaaacaacataaacatgctgaaggaaggaatg
aaaattgaagcaactcatgtaaagaaaaagcagcttcatcactaccttccagcagagatt
cttcaaaaaaagaaaaagcaaagtctctctgacgtcagtcgaagtggacttcaatccaaa
agatcatctctagatagcaattgtctggatagctccagagacactgataatgggacacct
tttaattccccggtatctacaaacaagccttctaaactggatagtcctcctgcaggagaa
acagaaaggaatagtgttgagcctgctgctgtaattgtggagaagccactgagtgttcca
ccagctcaaggactttctattccagtcattggtgcaaaagttgactctacagtaaaaaca
gcatcatccccggctgtgtgtaccattcctactgtggtaggacgaaatgtcattcctcga
attacaacacctcacaaccctgcccagggacaaccacatctaaatggaatgtcaaatata
actaagaatgttacacccaaaagatctcattcaccatccatagatggaacttctaagagg
ttgaaagacatagaaaagtttattcgacttgaatcagcatttaaggactcccgtgctgct
gaagagagaaaaagaaaatcattggatgccattggaggagaatctatgcctattccaact
attgatacatcacgtaaaaagagactacctagtaaagaacttccagattcatcatctcca
gttccagcaaataacatccgtgtcatcaaaaattccatccgactgacacttaatcggtaa
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