Oryctolagus cuniculus (rabbit): 100344741
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Entry
100344741 CDS
T03373
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04330
Notch signaling pathway
ocu05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100344741
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100344741
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GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
DUF6276
Motif
Other DBs
NCBI-GeneID:
100344741
NCBI-ProteinID:
XP_008262444
Ensembl:
ENSOCUG00000014503
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Position
13:complement(33035396..33050997)
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AA seq
709 aa
AA seq
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MATDRGGSGPGPGSTGLLFLLSFCVLLAGLCGGNSVERKIYIPLNKTAPCVRLLNATHQI
GCQSSISGDTGVIHVVEKMEDLQWVLTDGPNPPYMVLLEGNLFTRETMEKLKGRTSRIAG
LAVTIAKPNSTSGFSPSVQCPNDGFGVYSSSYGSEFAHCRGVPWNPEGNGLAYEDFSFPI
FLLEDENETKVIKQCYHDHNLSQNGSAPTFPLCAMQLFSHMHAVVSTATCMRRSSIQSSF
SINPEIVCDPLSDYNVWSMLKPINTSGTLEPDDRVVIAATRLDSRSFFWNVAPGAESAVA
SFVTQLAAAEALQKAPDVNTLPRNVMFAFFQGETFDYIGSSRMVYDMEKGKFPVPLENIA
SFVELGQVALRTSLELWMHTDPMSQKNESVRTEVEELLATLERSGADVPDVVLRRLSESQ
ALPPSSLQRFLRARNISGVVLADHSGSFHNKYYESIYDTAENINVVYPEWLSPEEDLNLV
TDTAKALANVATVLGRALYELAGGTNFTHTVQADPQTVTRLLYGFLIRANNSWFQSILRH
DLRSYLGDSPLQHYIAVSSPTNTTYVVQYALANLTGTVMNLTREQCQDPSKVPSENKDLY
EYSWVQGPLNSNKTDRLPRCVRSTARLSRALSPAFELSQWSSTEYSTWTESRWKDIRARI
FLIASKELEFLTLMVGFGILAFSLIVTYCVNAKADILFIAPREPGSVSY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggccacggataggggcggctctggacctggcccgggcagtacgggtcttcttttcctg
ttgtctttctgcgtcctactggcaggtttgtgtgggggaaactcagtggagaggaagatc
tacatccccttaaataaaacagctccctgtgtccgtctgctcaatgccactcatcagatt
ggctgccagtcttcaattagtggagacacaggagttatccacgttgtggagaagatggag
gacctgcagtgggtgttgaccgatggccccaaccctccttacatggttctgctggagggc
aacctctttaccagggagacgatggagaagctgaaggggagaaccagccgcattgctgga
cttgcagtgaccatagccaagcccaattccacctcaggcttctctcccagtgtgcagtgc
ccaaatgatgggtttggtgtttattccagctcttacgggtcagagtttgctcactgcaga
ggtgtgccatggaaccccgagggcaatggcttggcttatgaagacttcagtttccctata
tttcttcttgaagatgaaaatgaaaccaaggtcatcaaacagtgctaccacgatcacaac
ctgagtcagaacggctcagcacccaccttcccgctgtgtgccatgcagctcttctcacac
atgcatgctgtcgtcagcactgccacctgcatgcggcgcagctccatccagagctccttc
agcatcaacccagaaatcgtctgtgaccccctgtctgactacaacgtatggagcatgctg
aagcctataaatacatcgggaacattggagcctgatgacagggttgtaattgctgccacc
cggctggacagtcgctcctttttctggaacgtggccccgggcgcggaaagtgctgttgcc
tccttcgtcacccagctggctgcagctgaagctttgcagaaggcaccggatgtgaacacc
ctgccccgcaacgtcatgtttgccttcttccaaggggaaacttttgactacattggcagc
tcgagaatggtgtacgacatggagaaaggcaagtttcctgtgccgttggagaacatcgcc
tcgttcgtggagctgggacaggtggccttgagaacctcgctagagctttggatgcacacg
gatcccatgtctcagaaaaatgagtctgtaaggaccgaggtggaggaactcctggccaca
ctggagaggagtggtgctgatgtccccgatgttgtcctcaggaggctgagtgagtcccag
gccctcccaccatcttctctgcagcgatttcttcgagctcgaaacatctctggtgttgtt
ctggccgaccactctggttccttccacaacaaatactacgagagcatttatgacaccgct
gagaacattaatgtggtctatccagagtggctgagccctgaagaggacctgaacttagtg
acagacactgccaaggccctggcgaatgtggccacggtgctgggacgcgcactgtacgag
cttgcaggaggaaccaacttcacacacacagtccaggctgatccccaaacggtcacccgc
ctgctctatgggtttctgatcagagccaacaactcctggttccagtctatcctcaggcac
gacctccggtcctacttgggcgacagccctcttcagcattacatcgccgtctccagcccc
accaacaccacctacgtggtgcagtatgccttggcaaatttgaccggcacggtgatgaac
ctcacccgagagcagtgccaagacccaagtaaagtcccgagtgaaaacaaggatctctat
gagtactcatgggttcagggccccttgaattccaacaagacggaccggctgccccgctgt
gtgcgttccacggcacggctgtccagggccttgtcccctgccttcgaactgagtcagtgg
agctccaccgaatactccacatggactgagagccgctggaaggacatccgtgcccggata
tttctcatcgccagcaaagagctcgagttcctcaccctgatggtaggcttcggcatcctc
gccttctcgctcatcgtcacctactgcgtcaatgccaaggccgacatcctcttcattgct
ccccgcgagccaggatctgtgtcttactaa
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