Oryctolagus cuniculus (rabbit): 100344825
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Entry
100344825 CDS
T03373
Name
(RefSeq) netrin receptor DCC isoform X1
KO
K06765
deleted in colorectal carcinoma
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04360
Axon guidance
ocu04517
IgSF CAM signaling
ocu05200
Pathways in cancer
ocu05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100344825
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100344825
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100344825
09162 Cancer: specific types
05210 Colorectal cancer
100344825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100344825
Cell adhesion molecules [BR:
ocu04515
]
Immunoglobulin superfamily
DCC/UNC5 family
100344825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
V-set
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Ig_Rha78A_N
C2-set_2
Interfer-bind
Ig_4
CRLF2-like_D2
Sp38
Protocadherin
FAM176
V-set_CD47
EphA2_TM
DUF4998
TMEM154
Motif
Other DBs
NCBI-GeneID:
100344825
NCBI-ProteinID:
XP_051707170
Ensembl:
ENSOCUG00000000384
LinkDB
All DBs
Position
9:complement(22074106..23294827)
Genome browser
AA seq
1447 aa
AA seq
DB search
MENSLGCVWVPKLAFVLFGASLLSAHLQVTGFQIKAFTSLRFLSEPSDAVTMRGGSVLLN
CSAESDRGVPVIKWRKDGIHLALGLEERKQQLPNGSLLIQNILHSRHHKPDEGLYQCEAS
LGDSGSIISRTAKVAVAGPLRFLSQTESVTAFMGDTVLLKCEVIGEPMPTIHWQKNQQDL
TPVPGDSRVVVLPSGALQISRLQPGDIGIYRCTARNPASSRTGNEAEVRILSDPGLHRQL
YFLQRPSNVVAVEGQEAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNV
TDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVP
TVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKL
AIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNVQTFTVFFSREGDNRERALNTT
QPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLQAVSTS
PTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYKLEGLKKFTEYSLRFLA
YNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKI
RHRKTTRRGEMETLEPNNLWYLFPGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPENDL
DESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRY
YSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITDPTDPVDYYPLLDDFPTSVPDV
STPMLPPVGVQAVALTHEAVRVSWADNSVSKNQKTSDVRLYTVRWRTSFSASAKYKSEDT
TSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREGKP
RAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYF
RIQARNAKGVGPLSDPILFRTLKVEHPDKMANDQGRHGDGGYWPVDTNLIDRSTLNEPPI
GQMHPPHGSVTPQKNSNLLVIIVVTVGVITVLVVVIVAVICTRRSSAQQRKKRATHSVGK
RKGSQKELRPPDLWIHHEEMEMKNMEKPSGTDPAGRDSPSQSCQDLTPVSHSQSETQLGS
KSTSHSGQDTEEAGSSMSTLERSLAARRATRAKLMIPMEAQANNPAVVSAIPVPTLESAQ
YPGILPSPTCGYPHPQFTLRPVPFPTLSVDRGFGAGRTQSISEGPTTQQPPMLPPAQPEH
PSSEEAPSRTIPTACVRPTHPLRSFANPLLPPPMSAIEPKVPYTPLLSQPGPTLPKTHVK
TASLGLAGKARSPLLPVSVPTAPEVSEESHKPTEDPANVYEQDDLSEQMASLEGLMKQLN
AITGSAF
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggagaatagtcttggatgtgtttgggtacccaagctggcttttgtactcttcggagct
tccctgctcagcgcgcatcttcaagtcaccggtttccaaattaaagccttcacatccctg
cgcttcctgtcggaaccctctgatgccgtcacgatgcggggaggaagcgtcctcctgaac
tgctctgcggagtcggaccgcggagtgccggtcatcaagtggaggaaagacggcatccac
ctcgccctggggctggaggagaggaagcagcagcttcccaatgggtctctactgatacag
aacatcctccattccagacaccacaagccagacgagggactttatcaatgtgaggcgtct
ctgggagattccgggtcaattatcagtcggacagcgaaagttgcagtagcaggaccattg
aggttcctttcccagacagaatccgtcacagccttcatgggagatacagtgctacttaag
tgtgaagtcatcggggagcccatgccaacaatacattggcagaagaaccagcaagacctg
actccagtcccaggggactctagggtggtggtcttgccctctggagcattgcaaatcagc
agacttcaaccaggggacattggaatctatcgatgcacagctcggaatccagccagctcc
agaacaggaaatgaagcagaagtcagaattttatcagatccgggactgcacaggcagctg
tattttctacagagaccctccaatgtagtagccgttgaaggacaagaggcggtcctggag
tgctgcgtttctggctatcctccgccaagttttacctggttacgaggcgaggaagtcatc
caactcaggtctaaaaagtattctttattgggtggaagtaacttgcttatctccaacgtg
acagatgatgacagtggaacttacacctgtgttgtcacgtataaaaatgagaacattagt
gcctctgcagagctcacagtcctggttccaccctggtttttaaatcacccttccaacctc
tatgcctatgaaagcatggacattgagtttgaatgtgcagtctctggaaagcctgtgccc
actgtgaattggatgaagaatggagatgtggtcattcctagtgattattttcagatagtg
ggaggaagcaatttacggattcttggagtggtgaagtcagatgaaggcttttatcaatgt
gtggctgaaaatgaagctggaaatgcccagagcagtgcacagcttatcgtccctaagctt
gctatcccaagctccagtgtcctcccttctgctcccagagatgtggtccctgtcttagtt
tccagtcggtttgtccgtctcagctggcgcccacctgcagaagcaaaagggaatgttcaa
accttcacagtctttttctccagagaaggtgacaacagggagcgagcactgaatacaacc
cagcctgggtccctacagcttactgtgggcaacctgaagccagaagccatgtacacgttc
cgagtagtggcctacaacgagtggggtccaggggagagttcccaacccatcaaggtggct
acccagcctgaattgcaagtgccagggccagtagaaaacctgcaagctgtatctacctca
cctacctcaattcttattacctgggaaccccctgcctatgcaaatggtccagtccaagga
tacagattgttctgcactgaagtgtccacaggcaaagaacagaatatagaggttgatgga
ctctcttataaactggaaggcctgaagaaattcacggagtatagtcttcgattcctagct
tataatcgctatgggccaggagtatctactgatgatataacagtggttacgctctctgat
gtgccaagtgccccacctcagaacgtctcgctggaagtggtgaattcgaggagcatcaaa
gtaagctggctgcctcctccatcaggaacacaaaatggattcattactggctataaaatt
cgacatagaaagacgacccgcaggggtgagatggaaacactggagccaaacaacctctgg
tacctgttcccaggactggagaagggcagtcagtacagcttccaagtgtcagccatgaca
gtcaacggcactggacccccctccaactggtatacagcagagaccccagagaatgatctg
gacgaatctcaagtccctgatcagccaagctctcttcatgtgagacctcagaccaactgc
ataatcatgagttggacccctcccttgaacccaaacattgtagtgagaggttacattatt
ggatacggtgttgggagcccttatgcggagaccgtgcgcgtggacagtaagcagcgatat
tattccattgagagattagagtcaagttcccattacgtaatctccctaaaagcttttaac
aatgcaggagaaggagttcctctttatgaaagtgccactaccagatccataacagatccc
actgacccagttgattattatcctttgcttgacgatttccccacctccgtcccagatgtc
tccacccccatgctcccaccagtaggtgtacaggctgtggctctcacccacgaggctgtg
agggtcagctgggcagacaactctgtctctaagaaccaaaagacttccgacgtgcggctt
tacactgtccggtggaggaccagtttttctgccagtgccaaatacaagtcagaagacaca
acatctctaagttacacagcaacaggcctcaagccaaacacaatgtatgagttctcagtc
atggtaacaaagaacagacgatcaagcacatggagcatgacagcacatgccaccacatat
gaagcagccccgacctctgctcccaaggatttgacagtcattacccgggaagggaagcct
cgagctgtcattgtgagctggcagcctccattggaagccaatggaaaaatcactgcttac
attttattttataccttggacaagaatataccaatcgatgactggattatggaaacaatc
agtggtgatcggctcactcatcagatcatggatctcaacctcgacaccatgtactatttc
cgaatccaagcacggaatgcgaaaggagtggggcccctctctgacccaattcttttcagg
actctgaaagtggaacaccctgacaaaatggctaatgaccaaggtcgtcatggagatggg
ggttattggccagtagatactaatttgattgataggagcactctcaatgagccacccatc
ggacagatgcaccccccacacggcagtgtcaccccacagaagaacagcaacctgcttgtg
atcatcgtggtcactgtcggtgtcatcacggtgctggtcgtggtgattgtggccgtgatt
tgcactcggcgctcttcagctcagcagagaaagaaacgggccacccacagtgttggcaaa
aggaaaggcagccagaaggagctccgacctcctgatctttggatccatcatgaagaaatg
gagatgaaaaacatggagaagccctcaggcactgaccctgcgggaagagattccccctcc
caaagttgccaagacctcacaccagtcagccacagccagtcagaaacccaactggggagc
aaaagcacctctcattcaggtcaagacactgaggaagcaggcagctccatgtccaccctg
gagaggtcactggctgctcgccgagctacacgggctaagctcatgattcccatggaggcc
caggccaacaatcctgctgttgtgagtgccatccctgtaccaaccctagaaagtgcccag
tacccaggaatcctcccatctcccacctgtggatatccccacccgcagttcactctccgg
cccgtgccattcccaacactgtcagtggaccgaggattcggagcaggaagaactcagtca
ataagtgaaggaccaaccacccagcaaccacccatgctacccccagctcagcccgagcat
cccagcagtgaggaggcaccaagcagaaccatccccacggcctgtgttcgaccgacgcat
ccactccgcagctttgctaaccctctgctacctccgccaatgagtgcaatagaaccgaaa
gtcccttacacaccacttttgtctcagccagggcctactcttcccaagacccacgttaaa
acagcctctcttggattggctggaaaagctagatcccctttgcttcctgtgtctgtgcca
acagcccctgaagtgtctgaggagagccacaaaccaacagaggatccagctaatgtctat
gagcaggatgatttgagtgaacaaatggcaagtttagaagggctaatgaagcaacttaat
gccatcacaggctcagccttttaa
DBGET
integrated database retrieval system
