Oryctolagus cuniculus (rabbit): 100344843 Help Entry 100344843         CDS       T03373                                  Name (RefSeq) dmX-like protein 2 isoform X8   KO K24155   rabconnectin-3a Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04142   Lysosome Brite KEGG Orthology (KO) [BR:ocu00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     100344843  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100344843 Membrane trafficking [BR:ocu04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     100344843  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     100344843    RAVE complex     100344843 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_HPS5 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_WDR19_2nd NBCH_WD40 Motif Other DBs NCBI-GeneID:  100344843 NCBI-ProteinID:  XP_008267224 Ensembl:  ENSOCUG00000005948 LinkDB All DBs Position 17:21867504..22043318 Genome browser AA seq 3036 aa AA seqDB search MHLHQVLTGAVNPGDNCYSVGSVGDVPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQV SCVECSNQQGRIAASYGNAVCIFEPLGINSHKRNCQLKCQWLKTGQFFLSSVTYNLAWDP QDNRLLTATDSVQLWAPPGGDILEEEEETDNKIPTVLNDWKCVWQCKTSVSVHLMEWSPD GEYFATAGKDDCLLKVWYPMTGWKSSIIPQDHHEVKRRQASTQFSFVYLAHPRAVTGFSW RKTSKYMPRGSVCNVLLTSCHDGVCRLWAETLLPEDCLLGEQICETTTSSVASTLAQTGR HKDRIQHALETIHHLKNLRKGQRRSSVLVTHTDLMHDQVATHEVQRHISHHANALCHFHI AASINPATDIPNVLGGTAFNIDDGNGGFVVHWLNNKEFHFTSSTEIFMHQLRKLSEKQVD HESDDADREDEDHPQEERERGLHMKLDHELSLDRESEAGTGSSEHEEGEREGSPRTCSRP STPMPLPTVLLDRKIEMLLTEWNKNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQV SFSSRIPVAFPSGDASSLSKNIMMYACVNCAKDSHYTLSHQEVMSTGSPQGSQPHSRSHS THMNIVAPTVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNDLACHS VLPLLLTSSHHNALLTPESDCRWDSDNKLSRLMDPVKHVKGSSKQPLRNAATRTFHDPNA IYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASA CFVASDGKNLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIELDAIT DQCGSHTQLLHVFQEDFIIGYKPHKEEMEKKETEIFFQPSQGYRPPPFSEKFFLVVIEKD SNNNSVLHMWHLHLKSVQACLAKASEGVSSESLLSVPGQKNVDSSPETSPSVSPMPHSSS IANLQTASKLILSSRLVYSQPLDLPGAVEVIRATPSAGHLSSSSIYPVCLAPYLVVTTCS DNKVRFWKCCMETNPQCDKSEEKETYHWRRWPLMNDEGEDNSSTVSIVGRPVAVSCSYTG RLAVAYKQPVQHNGFVSKEFSMHVCIFECESTGGSEWVLEQTIHLDDLVKVGSVLDSRVS VDSNLFVYSKSDALLSKDRYLIPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRLSGI VTEQTNSKDGVAVITLPLGGSIKQGVRSRWVLLRSIDLVSSVDGTPSLPVSLSWVRDGIL VVGMDCEMHVYAQWKHAVKFGDPEADSPDAEETAVRDHSAFKSNVLARKSIVEGAAVADD VFSSPTVVQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEVA IVRDADAGEGTKRHLSRTISVSGSTAKDTVTIGKDGTRDYTEIDSIPPLPLYALLAADQD TSYRISEESTKIPQSFEDHTESQADQYSELFQIQDVTTDDIDLEPEKRENKSKVINLSQY GPAYFGQEHARVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDESRDKSYSGGDT LDECGLRYLLAMRLHTCLLTSLPPLYRAQLLHQGVSTCHFAWAFHSEAEEELINMIPAIQ RGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAALFYLSMKKKAVVWG LFRSQHDEKMTTFFSHNFNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVC LEKMEDIQLAMVIARLYESEFETSSTYISILNQKVLGCQKDGSGFNCKRLHPDPFLRSLA YWVMKDYTRALDTLLEQTPKEDEEHQAIIKSCNPTVFSFYNYLRTHPLLIRRNLASPEGT LATLGLKTEKNFVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVSKTSSLPAKK DQPDLMSKELGDAPSESKTVSDGNGSSSTEWSQVTSAHFDWSQPIVKVDEEPLNLDWGED HDSALEEEEEDAVGLVMKSTDARRKDTQEDEKASEAAVELTPQEEDCLGGDAEVDVIAEQ LKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAALHEICNHESVIKEYSSKT YSKAESELLDQEEMVDKPDIGSYERHQIERRRLQAKREHAERRKLWLQKNQDLLRVFLSY CSLHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIAN PVLYLNNHIHDILYTIVQMKTPPHPNIEDVKVHTLHSLAASLSASIYQALCDSHSYSQTE GNQFTGMAYQGLLLSDRRRLRTESIEEHATPNSSPAQWPGVSSLINLLSSAQDEDQPKLN ILLCEAVVAVYLSLLIHALATNSSNELFRLAAHPLNNRMWAAVFGGGVKLVVKPRRQSEN ISAPPVPSEDIDKHRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELSMWDYFV AKPFLPLSDSGVIYDSDESIHSDEEDDDAFFSDTQIQEHQDPNSYSWALLHLTMVKLVLH NVKNFFPIAGLEFSELPVTSPLGIAVIKNLENWEQILQEKMDHFEGPPPNYINTYPTDLS VGAGPAILRNKAMLEPENTPFKSRDSSALPVKRLWHFLVKQEVLQETFIRYIFTKKRKQS EVEADLGYPGGKAKVIHKESDMIMAFAVNKANSNEIVLASTHDVQELDVTSLLACQSYIW IGEEYDRESKSSDDIDYRGSTTTLYQPSTTPHPASQVHPPSSLPWLGSGQTSTGASVLMK RNLHNVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFRQAGNARVTRLYFNSQGNK CGVADGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFITSSSLVATSGQSNDNRNVC LWDTLISPGNSLIHGFTCHDHGATVLQYAPKQQLLISGGRKGYVCVFDIRQRQLLHTFQA HDSAIKALALDPCEEFFTTGSAEGNIKVWRLTGHGLVHSFKNEHAKQSIFRNIGAGVMQI DIGQGGRVFSCGADGTLKTRVLPSAFNIPPRILDIL NT seq 9111 nt NT seq  +upstreamnt  +downstreamnt atgcatctgcatcaggtcctcaccggggctgtcaaccctggagacaactgctactctgtg ggcagcgtcggggatgtccccttcacggcatatggatcaggctgcgatattgttattttg gcaaatgactttgaatgtgtgcagatcattcctggtgctaagcatggaaacatccaagtc agctgtgtggagtgttctaaccaacaaggaagaattgcagcttcatatggcaatgctgtt tgtatttttgagcccctgggcataaattctcataagagaaattgtcaactcaagtgtcag tggcttaaaactgggcagttctttttgagttctgtgacatacaacttagcatgggaccct caagataacagattgttgacagcaactgattctgttcagttgtgggctcctccaggaggt gatattctagaagaggaggaagaaactgataataaaattcccacggttttaaatgactgg aagtgcgtctggcagtgcaaaacctcagtatctgtgcatttgatggaatggtctcctgat ggtgaatattttgcgactgccggaaaggatgactgtcttttgaaagtatggtatcctatg actggttggaaatcttcaattatacctcaggatcatcatgaagtgaaaaggagacaggct tccactcagttttcctttgtttacttggcacatccccgagctgtgacaggtttttcatgg cgtaaaactagcaagtatatgcccaggggttctgtctgtaatgtgttgctgacttcatgc catgatggtgtgtgccggctgtgggcagaaactttattgccagaagattgtcttttgggt gagcagatttgtgagactaccacttccagtgtcgccagcacccttgctcagactggaaga cacaaagacaggatccagcatgcccttgagacaatacatcacttgaaaaatttaaggaag ggacaaaggaggtcttctgtccttgtaactcacactgacttaatgcacgaccaggtggca acacatgaagttcagagacacatttcccaccatgcaaatgcactgtgtcatttccacatt gcggcaagcatcaaccctgccacagatatcccaaatgtcctgggtggtactgcctttaac attgatgatggaaatgggggctttgtagttcactggttaaacaacaaggagtttcatttt acatcatctactgaaatattcatgcatcaattacgaaaactttctgaaaagcaagtagat catgaaagtgatgatgctgatagagaagatgaggatcatccacaggaggagagagagagg ggtttgcatatgaaactagaccatgaattatccctggatagagaatctgaggcaggtaca ggatcttcagaacacgaagaaggagaaagagaaggaagtcctaggacctgttcacgaccc agcacaccaatgccactacccacggtcctgcttgatcggaagattgaaatgctgctcacc gaatggaataagaaccctgacatgttgtttacaatacaccctgtagatggtactttccta gtatggcatgttaagtatttggatgaatataaccctggaatctttagacaagtccaggtt tctttttcttctcggattcctgttgcatttccctctggcgatgcaagctctctcagtaag aatatcatgatgtatgcctgtgtgaattgtgcaaaggattctcactacactctgtctcac caagaggtgatgtctacaggcagccctcagggatctcagccacactctagatcacacagc acgcatatgaacattgttgctcccacagtaatgatggtctctaaacacatagacgggtct ttaaaccagtgggcagtcacttttgcggataagtctgcctttaccaccgtcctgactgta tcccacaaatttagatactgtggtcatcgatttcacctcaatgacctggcatgtcattcc gttctgccactgttactgacatcctctcatcacaatgctctgctgactcccgaatcagat tgtcgttgggactcagacaacaaattaagtagattaatggatcctgtaaaacatgtgaaa ggctcctcgaaacagccgcttagaaacgcagcaacccgtacatttcatgaccccaatgcc atctacagtgaacttattctgtggcgtgtagacccaatagggcctctgtcatacactgga ggagtgtcagaactggctcgaatcaactccctgcatacctcagccttctctaatgtggct tggcttccaactcttattcccagttattgtcttggcacatactgtaattctgcaagtgct tgctttgttgcttctgatggcaaaaatctgagactctatcaagctgtagtagatgcaagg aaattattggatgaattgtcagacccagaatcatcaaaactaattggagaagtgtttaat attgtgagccaacagtctactgctcgacctggctgcattatagaactcgatgcaataact gaccaatgtggctcacacacacagttgctccatgtgttccaagaagacttcattatagga tacaagccacataaggaagaaatggagaagaaggaaacagaaatattttttcaaccatca caaggatatcgtccaccaccattttcagagaagttctttctagtagtgattgaaaaggac agcaataataactctgttctccacatgtggcaccttcatcttaaatctgtgcaagcatgt ttagccaaagcttcagaaggtgtttcctcggagagtctactttcagtccctggacagaag aatgtggattcatctccagaaacctctcccagtgtgagccccatgccacattcttcatca attgccaatcttcaaactgctagtaaacttattttgagttctaggctggtgtatagccaa cctcttgatctcccaggagcagttgaagtaattcgagcaacaccttcagcaggccatctg agttcttcttcaatttatccagtgtgccttgcaccatatttagtggttacaacttgttct gacaataaagtacgcttctggaaatgttgtatggaaaccaacccacaatgtgataaaagt gaagagaaagaaacctatcattggaggagatggcccttgatgaatgatgaaggagaagat aatagcagtacagtgagcattgtgggaagaccagttgctgttagctgttcatatacaggt cgccttgccgtggcttacaagcaacctgtccagcacaatggttttgtttctaaagaattt tccatgcatgtttgtatatttgaatgtgaatctactggagggtcagaatgggttttagaa caaacaattcacctcgatgatttggttaaggttgggagtgtacttgattcaagggtcagt gttgacagtaatctgtttgtatatagcaaatcagatgcacttttgagcaaagatagatac cttattccaaatattaaacatttagtacatttggactgggtatcaaaggaagatggctcc cacattctcacagtgggagttggtgctaatatcttcatgtatgggagactttcaggaatt gtaactgagcaaaccaacagtaaggatggcgtggctgttattactttaccactaggtggt agtatcaagcagggagttaggtcaagatgggttcttcttaggtctatagacttagtgtct tctgttgatggcacaccatcactgcctgtctctctgtcttgggtgagagatgggatattg gtggtagggatggattgtgaaatgcatgtatatgcacagtggaagcatgctgtcaagttt ggagaccctgaagctgatagtccagatgcagaagagacagcagtacgtgatcattctgcc tttaaatctaatgtgttggcaagaaaaagtattgttgaaggtgcagctgttgccgatgat gttttctcctcaccgactgtggttcaagatggtggcttatttgaggctgcacatgtactt tcccctactctcccacagtatcatccaactcaactgttagaattgatggatttagggaaa gttcgaagggccaaagccattctctctcatttagtaaaatgtattgctggtgaagttgca atagtaagagatgctgatgctggagaaggaactaagcgacatctttctcgaactattagt gtaagtggcagtacagccaaggatacagtcaccataggaaaagatggtactcgagattat acagagatagattctattcctccacttccactatatgccttgctggccgcagatcaggat acatcctacagaatttcagaggaaagtacaaaaataccacagagctttgaagatcatact gaaagtcaagcagatcagtattcagagctgttccaaatccaggatgtaacaacagatgat attgatttagagccagaaaagagagaaaacaagtcaaaagtaataaatctttcacaatat ggaccagcttactttggccaggaacatgctagggtactttcaagtcatcttatgcactca agtctaccaggccttacccgtttggagcagatgtttcttgtagccctggctgatacagta gctaccaccagtactgagcttgatgaaagcagagataagagttactcaggaggagacaca ttagatgagtgtggtttaagatacctattagctatgcgcttgcacacatgccttttgaca tccctgcctcctttgtaccgagcacagctacttcatcaaggtgtgtccacctgccatttt gcctgggcatttcattctgaggctgaggaagaactgattaatatgattccagcaattcag cgaggggaccctcagtggtctgagttaagagcaatgggaataggttggtgggtgagaaat attaacacacttcgaagatgcattgaaaaggttgctaaagcttcttttcaaaggaacaat gatgccttggatgctgcattattctacctttcaatgaagaagaaagctgtggtatggggt ctgtttaggtcacagcatgatgaaaaaatgacgacatttttcagccacaactttaatgag gataggtggcgtaaagctgctttgaaaaatgctttttctttacttggaaaacaacgcttt gaacaatctgctgcttttttcttgttggctggttcactgaaagatgccatcgaggtatgt cttgaaaaaatggaagatattcagttagccatggttattgcccgcttatatgaatcagaa tttgagacttcatccacttatatatccatcttgaatcagaaggttttgggttgccagaag gatggctcaggattcaactgcaaaagattacatcctgatcctttcctgcgtagtcttgcc tattgggtaatgaaggattacacgcgggccttggatacgttactggagcaaacaccaaag gaggatgaagaacaccaagctatcatcaaatcttgtaatccaacggtgtttagcttttac aactaccttcgaactcatcctttgcttatccgaagaaaccttgcctcccctgaaggaact ttggcaaccttaggtctcaaaactgagaaaaactttgttgataaaattaacctcatagaa agaaaattgttctttaccactgcaaatgctcattttaaagttggatgccctgttttagcc ttagaggtactctccaaaattccaaaagtaagcaaaacatcttccttacctgcaaaaaaa gatcagcctgacttaatgtccaaagagctgggtgatgccccttcagaatcaaaaactgtg agtgatggcaatggaagttctagcactgagtggtcacaagtcacttccgcacactttgac tggagtcagccgattgtaaaagttgatgaggaaccccttaatctcgattggggtgaagat catgatagtgccttagaagaagaggaagaagatgctgtgggtttagtaatgaaaagcaca gatgccaggagaaaggacactcaggaagatgagaaggcttcagaggctgctgtggagttg actcctcaggaggaggactgtctcggaggtgatgctgaggttgatgtgattgccgaacaa ctaaaattcagggcttgtttaaagatccttatgacggaactaagaacgctggccacaggt tatgaagtagatggaggaaaactcaggtttcagctctataactggcttgaaaaggaaatt gctgccctgcatgagatatgtaatcatgagtcagttatcaaagaatattccagtaaaaca tactcgaaggcagagagtgagcttctggaccaggaagaaatggtggacaaaccagatatt ggttcctacgagcgccatcagatagaaaggcggagactacaggctaaacgtgaacatgca gagagacgaaagctgtggctgcagaaaaaccaagatctcctcagagtgtttcttagttac tgcagccttcatggggcccagggtggtggtctggcctcagtaagaatggaactcaagttt ttgctgcaagaatcacagcaggaaactacagtaaaacagcttcagtctccactaccattg cctactaccctacctctgctttcagcaagtattgcttcgacaaaaacagtcatagctaat cctgtattgtacttaaataatcacatccatgatatactttatactattgttcagatgaaa acaccacctcatcccaatatcgaagatgtgaaggtgcacacacttcattcactagcagca tccctttctgcatcaatttaccaagcattatgtgacagtcatagctacagtcagacagaa ggaaatcagtttacaggaatggcttaccaaggacttcttttaagtgaccgtcgaagacta agaacagaaagcattgaagaacatgcaacaccaaattcatctcctgctcaatggcctggt gtgagctcacttattaatctcttgagttcagctcaagatgaagaccagccaaaactgaat attttgttatgtgaagctgttgttgctgtttacttgagtttattgatacatgctcttgcc actaattcttccaatgagttgttccgacttgcagcccacccattaaataatcgaatgtgg gctgctgtttttggagggggcgtgaaacttgttgttaaacctcgaagacaatcagaaaat atttcagcacctcctgttccttctgaagacatagataaacaccggagaagatttaacatg cgaatgctggtccctggaaggcctgtgaaagatgccaccccaccaccagtgcctgcagaa agaccatcttacaaagaaaagtttattcctcctgaacttagtatgtgggattattttgtg gcaaagccctttcttcccttgtctgacagtggtgtgatctatgactctgacgaaagcatt catagtgatgaggaagatgatgacgcttttttttcagatacacaaatacaggagcaccaa gatcccaactcctatagctgggctctcctgcatttgacaatggttaaactagtacttcac aatgtcaagaatttcttccccattgctggactggaattctctgagctgcctgtgacatca ccgttaggtattgctgtgattaagaacttggagaactgggaacagatcctgcaagagaaa atggaccactttgaaggcccaccccctaactatatcaacacgtatccaacggacctttca gtaggagctgggccagctattcttcgaaataaagcaatgttagaaccagaaaatactcca ttcaaatcccgggattcttctgcacttccagtcaaacgactgtggcatttccttgttaaa caagaagtccttcaagagacatttattagatacattttcactaagaaaagaaagcagagt gaggttgaagctgacctgggctatccgggaggaaaagcgaaggtcattcataaggagtcg gacatgataatggcatttgctgttaacaaggcaaacagtaatgaaattgttttggcttca acacatgatgttcaagaacttgatgttacttctctactggcctgtcagtcatatatatgg attggagaagaatatgacagagaatccaaaagctcagatgacattgattatcggggttct actacaactctctatcagcccagcacaaccccccatccagcaagccaggtgcacccacct tcttctcttccctggctgggcagtggacagaccagcactggagcgagtgtgcttatgaaa aggaatctacataacgttaagagaatgacctcacacccagttcatcaatattacctcacc ggagcccaggacggcagcgtgcgcatgtttgagtggacgcgacctcagcagctcgtgtgc ttccgccaggctggcaacgccagagtcaccaggttatattttaactcacaaggcaacaag tgtggagtggcagatggagagggttttctcagtatctggcaagttaaccaaactgcatcc aaccctaaaccttacatgagttggcagtgccacagtaaagccacaagtgactttgcattt attacctcttcaagtctggtcgccacatctggacagtccaatgacaatagaaacgtctgc ctctgggacacattaatatcacctggaaacagcctcattcatgggttcacgtgccacgat cacggtgccacggtcctgcagtatgcgcccaaacagcagctgctcatctccggaggcagg aaaggctacgtctgcgtcttcgacatcaggcagaggcagctcctgcacacattccaggct catgactcagccattaaagctctggccctggatccctgtgaggaatttttcaccacaggc tcagccgaaggcaacataaaggtgtggagactcacaggccacgggctggttcattcattt aagaacgagcacgcgaagcagtctatattcagaaacatcggggccggcgtcatgcagatc gacatcggccagggcggccgcgtcttctcctgtggcgccgacggcacgctgaaaaccagg gttttgcccagtgcttttaacatccctcctagaattcttgacatcctatag

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